Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTTATGGCATCGTTCTTATAGCTTGTGGGTCTGTGATAGCGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTTGGAAGAAGTCGTAAAAAGAAGACAATTACATATAATATACCCAAACCCACTCCACAAAGGAGCCTTGATATTGAACGTGGCCAATTACCTAAGAACAATAATAATGGTGGGATGACTATTCTTGGTGGAGCAGCTGCGGGTTTAGCTACAGCTGCTGTTGTAACCAATTTAAGCAGCAGTGGCGGTGGCGGTGGTGGAGGAGATTCTGGTAGTGGTGATGGCGGCGGTGGGGGATGTGGCGGTGGAGGCTGCGGTGGCTGCGGAGGTGGCTGTGGAGGTGGCTGTGGATGAGGTGGAGGTTGATGTATAAGTGA
mRNA sequence
ATGGAAACTTATGGCATCGTTCTTATAGCTTGTGGGTCTGTGATAGCGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTTGGAAGAAGTCGTAAAAAGAAGACAATTACATATAATATACCCAAACCCACTCCACAAAGGAGCCTTGATATTGAACGTGGCCAATTACCTAAGAACAATAATAATGGTGGGATGACTATTCTTGGTGGAGCAGCTGCGGGTTTAGCTACAGCTGCTGTTGTAACCAATTTAAGCAGCAGTGGCGGTGGCGGTGGTGGAGGAGATTCTGGTAGTGGTGATGGCGGCGGTGGGGGATGTGGCGGTGGAGGCTGCGGTGGCTGCGGAGGTGGCTGTGGAGGTGGCTGTGGATGAGGTGGAGGTTGATGTATAAGTGA
Coding sequence (CDS)
ATGGAAACTTATGGCATCGTTCTTATAGCTTGTGGGTCTGTGATAGCGGCTGTGATGATTTTATGGTGTGTTTGTAAGTTTGGAAGAAGTCGTAAAAAGAAGACAATTACATATAATATACCCAAACCCACTCCACAAAGGAGCCTTGATATTGAACGTGGCCAATTACCTAAGAACAATAATAATGGTGGGATGACTATTCTTGGTGGAGCAGCTGCGGGTTTAGCTACAGCTGCTGTTGTAACCAATTTAAGCAGCAGTGGCGGTGGCGGTGGTGGAGGAGATTCTGGTAGTGGTGATGGCGGCGGTGGGGGATGTGGCGGTGGAGGCTGCGGTGGCTGCGGAGGTGGCTGTGGAGGTGGCTGTGGATGA
Protein sequence
METYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGDSGSGDGGGGGCGGGGCGGCGGGCGGGCG
Homology
BLAST of MELO3C016146 vs. NCBI nr
Match:
KGN53550.1 (hypothetical protein Csa_015259 [Cucumis sativus])
HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39
Identity = 110/125 (88.00%), Postives = 113/125 (90.40%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNN 60
M+TY IVLIA GSVI AVMILWCVCKFGRSRKKKTITYN+PK TPQR+LDIERGQLPKNN
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNN 60
Query: 61 NNGGMTILGGAAAGLATAAVVTNLSSSGGGGGG--GDSGSGDGGGGGCGGGGCGGCGGGC 120
NNGGMTILGGAAAGLATAAVVT LSSSGGGGGG G G GDGGGGG GGGCGGCGGGC
Sbjct: 61 NNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGDGDGGGGGGCGGGCGGCGGGC 120
Query: 121 GGGCG 124
GGGCG
Sbjct: 121 GGGCG 125
BLAST of MELO3C016146 vs. NCBI nr
Match:
XP_023552868.1 (glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 84/131 (64.12%), Postives = 96/131 (73.28%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGDSGSGDG----GGGGCGGGGCG 120
NGGMTIL GAAAGLATAAVVT+LS+ GGGGGGG+ G GDG GGGGCGGG G
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGEEGGGDGGGGDGGGGCGGGCGG 120
Query: 121 GCGGGCGGGCG 124
GCGGGCGGGCG
Sbjct: 121 GCGGGCGGGCG 127
BLAST of MELO3C016146 vs. NCBI nr
Match:
XP_038889436.1 (acanthoscurrin-1-like [Benincasa hispida])
HSP 1 Score: 110.9 bits (276), Expect = 7.8e-21
Identity = 87/125 (69.60%), Postives = 96/125 (76.80%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNN 60
M+TYGIVLI CGSVIA +MIL CVCKFG + KT+TY IP QR+ D+ERGQ N
Sbjct: 1 MKTYGIVLITCGSVIAGIMILRCVCKFGGRKIMKTVTY-IPNAASQRNPDLERGQ--PNK 60
Query: 61 NNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGDSGSGDGG--GGGCGGGGCGGCGGGC 120
NNGG+TIL GAAAGLATAAVVTNL + GGGGG G G+GG GGGCGGGGCG GGGC
Sbjct: 61 NNGGITILAGAAAGLATAAVVTNLGNDDTGGGGG-CGGGEGGDSGGGCGGGGCG--GGGC 119
Query: 121 GGGCG 124
GGGCG
Sbjct: 121 GGGCG 119
BLAST of MELO3C016146 vs. NCBI nr
Match:
KAG6577050.1 (hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 83/130 (63.85%), Postives = 96/130 (73.85%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSS---SGGGGGGGDSGSGDGGGGGCGGGGCGG 120
NGGMTIL GAAAGLATAAVVT+L++ GGGGGGG+ G GDGGGGGCGGG GG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGGGEEGGGDGGGGGCGGGCGGG 120
Query: 121 CGGGCGGGCG 124
CGGGCGGGCG
Sbjct: 121 CGGGCGGGCG 126
BLAST of MELO3C016146 vs. NCBI nr
Match:
XP_022931328.1 (glycine-rich protein 5-like [Cucurbita moschata])
HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19
Identity = 83/132 (62.88%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSS-SGGGGGGGDSGSGDG----GGGGCGGGGC 120
NGGMTIL GAAAGLATAAVVT+L++ GGGGGGG+ G GDG GGGGCGGG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGDGGGGCGGGCG 120
Query: 121 GGCGGGCGGGCG 124
GGCGGGCGGGCG
Sbjct: 121 GGCGGGCGGGCG 128
BLAST of MELO3C016146 vs. ExPASy TrEMBL
Match:
A0A0A0KVE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 110/125 (88.00%), Postives = 113/125 (90.40%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNIPKPTPQRSLDIERGQLPKNN 60
M+TY IVLIA GSVI AVMILWCVCKFGRSRKKKTITYN+PK TPQR+LDIERGQLPKNN
Sbjct: 1 MKTYAIVLIAGGSVIGAVMILWCVCKFGRSRKKKTITYNMPKRTPQRNLDIERGQLPKNN 60
Query: 61 NNGGMTILGGAAAGLATAAVVTNLSSSGGGGGG--GDSGSGDGGGGGCGGGGCGGCGGGC 120
NNGGMTILGGAAAGLATAAVVT LSSSGGGGGG G G GDGGGGG GGGCGGCGGGC
Sbjct: 61 NNGGMTILGGAAAGLATAAVVTTLSSSGGGGGGDSGSGGDGDGGGGGGCGGGCGGCGGGC 120
Query: 121 GGGCG 124
GGGCG
Sbjct: 121 GGGCG 125
BLAST of MELO3C016146 vs. ExPASy TrEMBL
Match:
A0A6J1EY84 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 1.6e-19
Identity = 83/132 (62.88%), Postives = 96/132 (72.73%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M TY IVLI CG VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITCGCVIASAVILWCVCSYGGRKKKKAAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSS-SGGGGGGGDSGSGDG----GGGGCGGGGC 120
NGGMTIL GAAAGLATAAVVT+L++ GGGGGGG+ G GDG GGGGCGGG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLTNDGGGGGGGGEEGGGDGSGGDGGGGCGGGCG 120
Query: 121 GGCGGGCGGGCG 124
GGCGGGCGGGCG
Sbjct: 121 GGCGGGCGGGCG 128
BLAST of MELO3C016146 vs. ExPASy TrEMBL
Match:
A0A6J1J409 (glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 4.6e-19
Identity = 83/128 (64.84%), Postives = 94/128 (73.44%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKK----TITYNIPKPTPQRSLDIERGQL 60
M TY IVLI G VIA+ +ILWCVC +G +KKK T T + +PTP+ S D+E G+
Sbjct: 1 MRTYAIVLITSGCVIASAVILWCVCSYGGRKKKKTAPPTYTSSALRPTPRPSRDLELGEA 60
Query: 61 PKNNNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGDSGSGDGGGGGCGGGGC-GGCG 120
NGGMTIL GAAAGLATAAVVT+LS+ GGGGGGG G GD GGGG GGGGC GGCG
Sbjct: 61 ----KNGGMTILAGAAAGLATAAVVTSLSNDGGGGGGGGEG-GDDGGGGDGGGGCGGGCG 120
Query: 121 GGCGGGCG 124
GGCGGGCG
Sbjct: 121 GGCGGGCG 123
BLAST of MELO3C016146 vs. ExPASy TrEMBL
Match:
A0A1S3YHZ0 (zinc finger protein ZIC 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107776358 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 6.0e-11
Identity = 72/132 (54.55%), Postives = 88/132 (66.67%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNI-----PKPTPQRSLDIERGQ 60
M+ Y I LI CGSV A V+IL C+CK GR +K + T N+ P P Q + D+E+G+
Sbjct: 1 MKAYAIALIVCGSVAALVLILCCLCKGGRKKKSQPATRNVTGFAPPPPPLQANRDVEKGE 60
Query: 61 L-PKN---NNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGDSGSGDGGGGGCGGGGC 120
+ PK+ +GGM ILG AA +ATAAV+T S+ GGGGGG SGSG GGG G GGGGC
Sbjct: 61 ITPKSTAVTKDGGMVILGATAATVATAAVIT--SAYSGGGGGGTSGSGGGGGCGSGGGGC 120
Query: 121 GGCGGGCGGGCG 124
GG GG GGGCG
Sbjct: 121 GGGGGCGGGGCG 130
BLAST of MELO3C016146 vs. ExPASy TrEMBL
Match:
A0A1U7W9C4 (zinc finger protein ZIC 2-like OS=Nicotiana sylvestris OX=4096 GN=LOC104221816 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 6.0e-11
Identity = 73/132 (55.30%), Postives = 89/132 (67.42%), Query Frame = 0
Query: 1 METYGIVLIACGSVIAAVMILWCVCKFGRSRKKKTITYNI-----PKPTPQRSLDIERGQ 60
M+ Y I LI CGSV A V+IL C+CK GR +K + T N+ P P Q + D+E+G+
Sbjct: 1 MKAYAIALIVCGSVAALVLILCCLCKGGRKKKSQPATRNVTGFAPPPPPLQANRDVEKGE 60
Query: 61 L-PKN---NNNGGMTILGGAAAGLATAAVVTNLSSSGGGGGGGDSGSGDGGGGGCGGGGC 120
+ PK+ +GGM ILG AA +ATAAV+T S+ GGGGGG SGSG GGG G GGGGC
Sbjct: 61 ITPKSTAVTKDGGMVILGATAATVATAAVIT--SAYSGGGGGGTSGSGGGGGCGSGGGGC 120
Query: 121 GGCGGGCGGGCG 124
GG GGGC GGCG
Sbjct: 121 GG-GGGC-GGCG 128
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN53550.1 | 4.8e-39 | 88.00 | hypothetical protein Csa_015259 [Cucumis sativus] | [more] |
| XP_023552868.1 | 5.9e-21 | 64.12 | glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_038889436.1 | 7.8e-21 | 69.60 | acanthoscurrin-1-like [Benincasa hispida] | [more] |
| KAG6577050.1 | 1.0e-20 | 63.85 | hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022931328.1 | 3.3e-19 | 62.88 | glycine-rich protein 5-like [Cucurbita moschata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KVE1 | 2.3e-39 | 88.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1 | [more] |
| A0A6J1EY84 | 1.6e-19 | 62.88 | glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 S... | [more] |
| A0A6J1J409 | 4.6e-19 | 64.84 | glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=... | [more] |
| A0A1S3YHZ0 | 6.0e-11 | 54.55 | zinc finger protein ZIC 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107776358 PE=4... | [more] |
| A0A1U7W9C4 | 6.0e-11 | 55.30 | zinc finger protein ZIC 2-like OS=Nicotiana sylvestris OX=4096 GN=LOC104221816 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
