MELO3C014845.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C014845.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAsp_protease_2 domain-containing protein
Locationchr06: 21880334 .. 21880705 (+)
RNA-Seq ExpressionMELO3C014845.jh1
SyntenyMELO3C014845.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATAAAGAAGTTTATGAGGAAGACAATGAAGAATTTGAAGAAGGAGCTGAATTTATTGAACCAGATGATGGAGAGAGGCTATCTTGTGTTTTCCAAGAGGTGCTAATTGCTCCTAAAAGGAACTCCAACCTTCAAAGACATTGCCTCTTCAAGACAAGGTGCACGGTTAGTGGGAAAGTGTGCAATGTGATTATAGACAATGGAAGTAGAGAGAACTTCGTTTCTAAGAAGCTAGTAACAGCCTTGAACCTCAAGGTGGAAGCTCATCCAAGTCCTTACAAGATCGGTTGGGTGAAGAAAACTGAAGCACAAATGAAATTTAGACCATTTCCCTTTCAATTGGAAGTAGCAACAAGAACCAAATAG

mRNA sequence

ATGGAAGATAAAGAAGTTTATGAGGAAGACAATGAAGAATTTGAAGAAGGAGCTGAATTTATTGAACCAGATGATGGAGAGAGGCTATCTTGTGTTTTCCAAGAGGTGCTAATTGCTCCTAAAAGGAACTCCAACCTTCAAAGACATTGCCTCTTCAAGACAAGGTGCACGGTTAGTGGGAAAGTGTGCAATGTGATTATAGACAATGGAAGTAGAGAGAACTTCGTTTCTAAGAAGCTAGTAACAGCCTTGAACCTCAAGGTGGAAGCTCATCCAAGTCCTTACAAGATCGGTTGGGTGAAGAAAACTGAAGCACAAATGAAATTTAGACCATTTCCCTTTCAATTGGAAGTAGCAACAAGAACCAAATAG

Coding sequence (CDS)

ATGGAAGATAAAGAAGTTTATGAGGAAGACAATGAAGAATTTGAAGAAGGAGCTGAATTTATTGAACCAGATGATGGAGAGAGGCTATCTTGTGTTTTCCAAGAGGTGCTAATTGCTCCTAAAAGGAACTCCAACCTTCAAAGACATTGCCTCTTCAAGACAAGGTGCACGGTTAGTGGGAAAGTGTGCAATGTGATTATAGACAATGGAAGTAGAGAGAACTTCGTTTCTAAGAAGCTAGTAACAGCCTTGAACCTCAAGGTGGAAGCTCATCCAAGTCCTTACAAGATCGGTTGGGTGAAGAAAACTGAAGCACAAATGAAATTTAGACCATTTCCCTTTCAATTGGAAGTAGCAACAAGAACCAAATAG

Protein sequence

MEDKEVYEEDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVATRTK
Homology
BLAST of MELO3C014845.jh1 vs. NCBI nr
Match: KAA0056272.1 (Asp_protease_2 domain-containing protein [Cucumis melo var. makuwa] >TYK05227.1 Asp_protease_2 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 241 bits (616), Expect = 2.62e-80
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0

Query: 1   MEDKEVYEEDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSG 60
           MEDKEV EEDNEEFEEGAEF EPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSG
Sbjct: 1   MEDKEVSEEDNEEFEEGAEFFEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSG 60

Query: 61  KVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVAT 120
           KVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVAT
Sbjct: 61  KVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVAT 120

Query: 121 RTK 123
           RTK
Sbjct: 121 RTK 123

BLAST of MELO3C014845.jh1 vs. NCBI nr
Match: TYK26684.1 (hypothetical protein E5676_scaffold313G003430 [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (343), Expect = 1.30e-37
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0

Query: 15  EEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIIDNGSREN 74
           EE  E IE +DG+R+SCV Q VLIAPK  +N QRHCLFKT+CT++GKVC+VIIDNGS E+
Sbjct: 80  EEETELIEANDGDRISCVIQIVLIAPKEETNPQRHCLFKTKCTINGKVCDVIIDNGSNES 139

Query: 75  FVSKKLVTALNLKVEAHPSPYKIGWVK 101
           FV+KKLVT LNLKVE HP+PY+IGWVK
Sbjct: 140 FVAKKLVTTLNLKVETHPNPYQIGWVK 166

BLAST of MELO3C014845.jh1 vs. NCBI nr
Match: XP_031741035.1 (uncharacterized protein LOC116403692 [Cucumis sativus])

HSP 1 Score: 144 bits (362), Expect = 6.06e-37
Identity = 68/94 (72.34%), Postives = 79/94 (84.04%), Query Frame = 0

Query: 9   EDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIID 68
           ED+ E EE  E IE DDGER+SCV Q +LI PK   NLQRHCLFKTRCT++G+VC+VIID
Sbjct: 436 EDSIEAEEETELIEADDGERVSCVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIID 495

Query: 69  NGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKK 102
           +GS ENFV+KKLVT LNLK EAHP+PYKIGWV+K
Sbjct: 496 SGSSENFVAKKLVTVLNLKAEAHPNPYKIGWVRK 529

BLAST of MELO3C014845.jh1 vs. NCBI nr
Match: XP_031744062.1 (uncharacterized protein LOC116404773 [Cucumis sativus])

HSP 1 Score: 140 bits (353), Expect = 6.99e-36
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0

Query: 9   EDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIID 68
           ED+ E EE  E IE DDGER+SC  Q VLI PK   NLQRHCLFKTRCT++G+VC+VIID
Sbjct: 268 EDSIEAEEETELIEADDGERVSCFIQRVLIMPKEEKNLQRHCLFKTRCTINGRVCDVIID 327

Query: 69  NGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKK 102
           +GS ENFV+KKLV  LNLK EAHP+PYKIGWV+K
Sbjct: 328 SGSSENFVAKKLVIVLNLKAEAHPTPYKIGWVRK 361

BLAST of MELO3C014845.jh1 vs. NCBI nr
Match: KAA0047078.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK05079.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 140 bits (352), Expect = 1.19e-35
Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0

Query: 9   EDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIID 68
           E +EE EE A+ IE DDG R+SCV Q VL+APK  +N Q H LFKTRCT++GKVC+VIID
Sbjct: 440 ESSEELEEEAKLIEADDGHRVSCVIQRVLLAPKEETNPQCHSLFKTRCTINGKVCDVIID 499

Query: 69  NGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKK 102
           NGS ENFV+KKLVTALNLK E HP+PYKIGWVKK
Sbjct: 500 NGSSENFVAKKLVTALNLKAEPHPNPYKIGWVKK 533

BLAST of MELO3C014845.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UK73 (Asp_protease_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00340 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 1.27e-80
Identity = 121/123 (98.37%), Postives = 121/123 (98.37%), Query Frame = 0

Query: 1   MEDKEVYEEDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSG 60
           MEDKEV EEDNEEFEEGAEF EPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSG
Sbjct: 1   MEDKEVSEEDNEEFEEGAEFFEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSG 60

Query: 61  KVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVAT 120
           KVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVAT
Sbjct: 61  KVCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKKTEAQMKFRPFPFQLEVAT 120

Query: 121 RTK 123
           RTK
Sbjct: 121 RTK 123

BLAST of MELO3C014845.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DSZ2 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003430 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 6.29e-38
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0

Query: 15  EEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIIDNGSREN 74
           EE  E IE +DG+R+SCV Q VLIAPK  +N QRHCLFKT+CT++GKVC+VIIDNGS E+
Sbjct: 80  EEETELIEANDGDRISCVIQIVLIAPKEETNPQRHCLFKTKCTINGKVCDVIIDNGSNES 139

Query: 75  FVSKKLVTALNLKVEAHPSPYKIGWVK 101
           FV+KKLVT LNLKVE HP+PY+IGWVK
Sbjct: 140 FVAKKLVTTLNLKVETHPNPYQIGWVK 166

BLAST of MELO3C014845.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C3X9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00540 PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 5.74e-36
Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0

Query: 9   EDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIID 68
           E +EE EE A+ IE DDG R+SCV Q VL+APK  +N Q H LFKTRCT++GKVC+VIID
Sbjct: 440 ESSEELEEEAKLIEADDGHRVSCVIQRVLLAPKEETNPQCHSLFKTRCTINGKVCDVIID 499

Query: 69  NGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKK 102
           NGS ENFV+KKLVTALNLK E HP+PYKIGWVKK
Sbjct: 500 NGSSENFVAKKLVTALNLKAEPHPNPYKIGWVKK 533

BLAST of MELO3C014845.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DU61 (Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold244G00080 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 9.55e-35
Identity = 64/101 (63.37%), Postives = 80/101 (79.21%), Query Frame = 0

Query: 3   DKEVYEEDNEEFEEGAEFIEPDDGERLSCVFQEVLIAPKRN-SNLQRHCLFKTRCTVSGK 62
           D+++ EE   +F+   E +EPD+GERLSCV Q VLIAPK + S+ QRH LFKTR T+  K
Sbjct: 119 DEDLIEEQEGDFDHDEEILEPDEGERLSCVLQRVLIAPKNDISHQQRHSLFKTRRTIQSK 178

Query: 63  VCNVIIDNGSRENFVSKKLVTALNLKVEAHPSPYKIGWVKK 102
           VCN+IID+GS +NFVSKKLVTAL LK+E H +PYKIGW+KK
Sbjct: 179 VCNMIIDSGSNKNFVSKKLVTALKLKIEPHSNPYKIGWIKK 219

BLAST of MELO3C014845.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DGR0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00870 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 2.80e-34
Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = 0

Query: 13  EFEEGAEFIEPDDGERLSCVFQEVLIAPKRNSNLQRHCLFKTRCTVSGKVCNVIIDNGSR 72
           EF+E  E IE D+G+ LSC+ Q VLI+PK  + LQRH LFKTRCT+ GKVCNVIID+GS 
Sbjct: 424 EFDEETEVIEADEGDSLSCILQRVLISPKEENQLQRHSLFKTRCTIQGKVCNVIIDSGSS 483

Query: 73  ENFVSKKLVTALNLKVEAHPSPYKIGWVKK 102
           ENFVSKKLVTALNLK + H  PYKIGW+KK
Sbjct: 484 ENFVSKKLVTALNLKTQPHEKPYKIGWIKK 513

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056272.12.62e-8098.37Asp_protease_2 domain-containing protein [Cucumis melo var. makuwa] >TYK05227.1 ... [more]
TYK26684.11.30e-3772.41hypothetical protein E5676_scaffold313G003430 [Cucumis melo var. makuwa][more]
XP_031741035.16.06e-3772.34uncharacterized protein LOC116403692 [Cucumis sativus][more]
XP_031744062.16.99e-3671.28uncharacterized protein LOC116404773 [Cucumis sativus][more]
KAA0047078.11.19e-3572.34reverse transcriptase [Cucumis melo var. makuwa] >TYK05079.1 reverse transcripta... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UK731.27e-8098.37Asp_protease_2 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3DSZ26.29e-3872.41CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3C3X95.74e-3672.34Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13... [more]
A0A5D3DU619.55e-3563.37Zf-CCHC domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3DGR02.80e-3470.00Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 37..121
e-value: 1.1E-5
score: 27.0
NoneNo IPR availablePANTHERPTHR35046ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 3..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014845.jh1.t1MELO3C014845.jh1.t1mRNA