MELO3C014835 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014835
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Cell wall protein DAN4-like
Location	chr06: 22005731 .. 22006210 (+)
RNA-Seq Expression	MELO3C014835
Synteny	MELO3C014835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGATCCTTTTTTTCCATCTTCTTTTTCTTCAATATCATCTCTTACATTAATTATCATAATGGCTTATCAATCTCTTGCACTCTTGGCTCTCATCATTGTCGCCGTCACTGGTGCTGTTGCTCAGGCTCCTTCTACCTCCCCCACCTCCTCTCCAGCTACCATGACCTCCTCAGTTGATTCCTCTACTTCGTCTTCATCTTCACTCGATTCAACTACCACCACTTCCTCGGCCGATGCTTCATCAATCTCAGCAGCTCCAGCATTCTCACCCGATTCCTCTGCTCAATCACCAACGACCGCCACATCTCCCACCGGTTCTCCATCTGGTGAGACTTCTCGCTTCTTTACAAATGGTTTTTTCGGCTGAAAATTTTATGGAGAGGAGATTCAAATCTCAACTTTTGGTAGAGACTAATATTATTTTAATCGTATGAGCTATGCTCCTCGAGGCAATGTAGTCGTCGAGTCATAATTTTAC

mRNA sequence

ATCGATCCTTTTTTTCCATCTTCTTTTTCTTCAATATCATCTCTTACATTAATTATCATAATGGCTTATCAATCTCTTGCACTCTTGGCTCTCATCATTGTCGCCGTCACTGGTGCTGTTGCTCAGGCTCCTTCTACCTCCCCCACCTCCTCTCCAGCTACCATGACCTCCTCAGTTGATTCCTCTACTTCGTCTTCATCTTCACTCGATTCAACTACCACCACTTCCTCGGCCGATGCTTCATCAATCTCAGCAGCTCCAGCATTCTCACCCGATTCCTCTGCTCAATCACCAACGACCGCCACATCTCCCACCGGTTCTCCATCTGGTGAGACTTCTCGCTTCTTTACAAATGGTTTTTTCGGCTGAAAATTTTATGGAGAGGAGATTCAAATCTCAACTTTTGGTAGAGACTAATATTATTTTAATCGTATGAGCTATGCTCCTCGAGGCAATGTAGTCGTCGAGTCATAATTTTAC

Coding sequence (CDS)

ATGGCTTATCAATCTCTTGCACTCTTGGCTCTCATCATTGTCGCCGTCACTGGTGCTGTTGCTCAGGCTCCTTCTACCTCCCCCACCTCCTCTCCAGCTACCATGACCTCCTCAGTTGATTCCTCTACTTCGTCTTCATCTTCACTCGATTCAACTACCACCACTTCCTCGGCCGATGCTTCATCAATCTCAGCAGCTCCAGCATTCTCACCCGATTCCTCTGCTCAATCACCAACGACCGCCACATCTCCCACCGGTTCTCCATCTGGTGAGACTTCTCGCTTCTTTACAAATGGTTTTTTCGGCTGA

Protein sequence

MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDSTTTTSSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG

Homology

[Close]

BLAST of MELO3C014835 vs. NCBI nr
Match: KAA0056285.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 2.8e-32
Identity = 99/106 (93.40%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDS----TTTTS 60
           MAYQSLALLALI+VAVTGAVAQAPSTSPTSSP TMTSSVDSSTSSSSSLDS    TTTTS
Sbjct: 1   MAYQSLALLALIVVAVTGAVAQAPSTSPTSSPTTMTSSVDSSTSSSSSLDSTTTTTTTTS 60

Query: 61  SADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
           SADASSIS APAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG
Sbjct: 61  SADASSISVAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 106

[Close]

BLAST of MELO3C014835 vs. NCBI nr
Match: KAA0056279.1 (cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall protein DAN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 5.1e-26
Identity = 86/102 (84.31%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDSTTTTSSADA 60
           MAYQSLA LALIIVAVTGAVAQAP+TSPTS+PATMTSS  SS+S  S+   TTT SSADA
Sbjct: 1   MAYQSLAFLALIIVAVTGAVAQAPATSPTSTPATMTSSASSSSSLDSTTIPTTTISSADA 60

Query: 61  SSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
           SSIS APAFSPDSSAQSPTTATSPTGSPS ETSR FTNGFFG
Sbjct: 61  SSISVAPAFSPDSSAQSPTTATSPTGSPSAETSRLFTNGFFG 102

[Close]

BLAST of MELO3C014835 vs. NCBI nr
Match: XP_008450206.1 (PREDICTED: cell wall protein DAN4-like [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 5.6e-25
Identity = 87/105 (82.86%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDS-----TTTT 60
           MAYQSLA L LIIVA+TG VAQAPSTSPTS+PATMTSS DSSTSSSSSLDS     TTTT
Sbjct: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60

Query: 61  SSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGF 101
           SS D SSIS APAFSPDSSAQSPTTATSPTGS S ETSR F+NGF
Sbjct: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF 105

[Close]

BLAST of MELO3C014835 vs. NCBI nr
Match: KGN58213.1 (hypothetical protein Csa_017497 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-18
Identity = 81/113 (71.68%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTS---PT--SSPATMTSSVDSSTSSSSSLDSTTTT 60
           MAYQSLA LALIIVA+TGAVAQ P++S   PT  S+PA MT    SS+SSSSSLDSTTTT
Sbjct: 1   MAYQSLAFLALIIVAITGAVAQGPTSSTPAPTTSSTPAPMT----SSSSSSSSLDSTTTT 60

Query: 61  ------SSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
                 SS D+ SISAAP  SPDSSAQSPTTATSP+GSPS ETSR F+NGFFG
Sbjct: 61  TTTSSGSSIDSPSISAAPGLSPDSSAQSPTTATSPSGSPSIETSRLFSNGFFG 109

[Close]

BLAST of MELO3C014835 vs. NCBI nr
Match: XP_031737565.1 (putative protein TPRXL [Cucumis sativus] >KAE8650787.1 hypothetical protein Csa_017464 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16
Identity = 83/118 (70.34%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTS---PT--SSPATMTSSVDSST-SSSSSLDSTTT 60
           MAYQSLA LALIIVAVTG VAQ P++S   PT  S+PA  TSS DSST SSSSSLDSTTT
Sbjct: 1   MAYQSLAFLALIIVAVTGVVAQGPTSSTPAPTTSSTPAPTTSSFDSSTPSSSSSLDSTTT 60

Query: 61  T----------SSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
           T          SSAD+ SIS AP  +PDS AQSPTTA SPTGS S ETSRFFTNGFFG
Sbjct: 61  TTTTTTSSSSGSSADSPSISVAPGLAPDSYAQSPTTAASPTGS-SAETSRFFTNGFFG 117

[Close]

BLAST of MELO3C014835 vs. ExPASy TrEMBL
Match: A0A5D3C1H7 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00200 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32
Identity = 99/106 (93.40%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDS----TTTTS 60
           MAYQSLALLALI+VAVTGAVAQAPSTSPTSSP TMTSSVDSSTSSSSSLDS    TTTTS
Sbjct: 1   MAYQSLALLALIVVAVTGAVAQAPSTSPTSSPTTMTSSVDSSTSSSSSLDSTTTTTTTTS 60

Query: 61  SADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
           SADASSIS APAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG
Sbjct: 61  SADASSISVAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 106

[Close]

BLAST of MELO3C014835 vs. ExPASy TrEMBL
Match: A0A5D3C1I1 (Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00260 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 86/102 (84.31%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDSTTTTSSADA 60
           MAYQSLA LALIIVAVTGAVAQAP+TSPTS+PATMTSS  SS+S  S+   TTT SSADA
Sbjct: 1   MAYQSLAFLALIIVAVTGAVAQAPATSPTSTPATMTSSASSSSSLDSTTIPTTTISSADA 60

Query: 61  SSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
           SSIS APAFSPDSSAQSPTTATSPTGSPS ETSR FTNGFFG
Sbjct: 61  SSISVAPAFSPDSSAQSPTTATSPTGSPSAETSRLFTNGFFG 102

[Close]

BLAST of MELO3C014835 vs. ExPASy TrEMBL
Match: A0A1S3BPQ2 (cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.7e-25
Identity = 87/105 (82.86%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSSTSSSSSLDS-----TTTT 60
           MAYQSLA L LIIVA+TG VAQAPSTSPTS+PATMTSS DSSTSSSSSLDS     TTTT
Sbjct: 1   MAYQSLAFLTLIIVAITGVVAQAPSTSPTSTPATMTSSFDSSTSSSSSLDSTTTPTTTTT 60

Query: 61  SSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGF 101
           SS D SSIS APAFSPDSSAQSPTTATSPTGS S ETSR F+NGF
Sbjct: 61  SSTDDSSISIAPAFSPDSSAQSPTTATSPTGSTSAETSRLFSNGF 105

[Close]

BLAST of MELO3C014835 vs. ExPASy TrEMBL
Match: A0A0A0L8Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592670 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.2e-18
Identity = 81/113 (71.68%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTS---PT--SSPATMTSSVDSSTSSSSSLDSTTTT 60
           MAYQSLA LALIIVA+TGAVAQ P++S   PT  S+PA MT    SS+SSSSSLDSTTTT
Sbjct: 1   MAYQSLAFLALIIVAITGAVAQGPTSSTPAPTTSSTPAPMT----SSSSSSSSLDSTTTT 60

Query: 61  ------SSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
                 SS D+ SISAAP  SPDSSAQSPTTATSP+GSPS ETSR F+NGFFG
Sbjct: 61  TTTSSGSSIDSPSISAAPGLSPDSSAQSPTTATSPSGSPSIETSRLFSNGFFG 109

[Close]

BLAST of MELO3C014835 vs. ExPASy TrEMBL
Match: A0A0A0LB81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.9e-17
Identity = 80/113 (70.80%), Postives = 85/113 (75.22%), Query Frame = 0


Query: 1   MAYQSLALLALIIVAVTGAVAQAPSTSPTSSPATMTSSVDSST-SSSSSLDSTTTT---- 60
           MAYQSLA LALIIVAVTG VAQ P+   +S+PA  TSS DSST SSSSSLDSTTTT    
Sbjct: 1   MAYQSLAFLALIIVAVTGVVAQGPT---SSTPAPTTSSFDSSTPSSSSSLDSTTTTTTTT 60

Query: 61  ------SSADASSISAAPAFSPDSSAQSPTTATSPTGSPSGETSRFFTNGFFG 103
                 SSAD+ SIS AP  +PDS AQSPTTA SPTGS S ETSRFFTNGFFG
Sbjct: 61  TSSSSGSSADSPSISVAPGLAPDSYAQSPTTAASPTGS-SAETSRFFTNGFFG 109

The following BLAST results are available for this feature:

BLAST of MELO3C014835 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056285.1	2.8e-32	93.40	cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05215.1 cell wall pro...	[more]
KAA0056279.1	5.1e-26	84.31	cell wall protein DAN4-like [Cucumis melo var. makuwa] >TYK05220.1 cell wall pro...	[more]
XP_008450206.1	5.6e-25	82.86	PREDICTED: cell wall protein DAN4-like [Cucumis melo]	[more]
KGN58213.1	8.7e-18	71.68	hypothetical protein Csa_017497 [Cucumis sativus]	[more]
XP_031737565.1	1.6e-16	70.34	putative protein TPRXL [Cucumis sativus] >KAE8650787.1 hypothetical protein Csa_...	[more]

BLAST of MELO3C014835 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C014835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C1H7	1.3e-32	93.40	Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3C1I1	2.5e-26	84.31	Cell wall protein DAN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BPQ2	2.7e-25	82.86	cell wall protein DAN4-like OS=Cucumis melo OX=3656 GN=LOC103491867 PE=4 SV=1	[more]
A0A0A0L8Q5	4.2e-18	71.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592670 PE=4 SV=1	[more]
A0A0A0LB81	7.9e-17	70.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G592680 PE=4 SV=1	[more]

BLAST of MELO3C014835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014835.1	MELO3C014835.1	mRNA