MELO3C014796 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014796
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Translocon-associated protein subunit beta
Location	chr06: 22840763 .. 22843533 (-)
RNA-Seq Expression	MELO3C014796
Synteny	MELO3C014796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTGTTCCACATTTTTGCGTACCTAATTCATCCGACGCCTCCTTCTCCAAACTCCCATTCCGATCATCTCTCTCGCCCTAATTCCGACGATTTCATGGCCCATCCCTTTCTACCTCCTCTGATCCGTCTCCTTTTCGCTTTTCTCTTCCTCTCCTCGACCATCGCAACCTCCGATGTTCCATTCATTGTCGCCCACAAGAAGGCTTCCCTCACTCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGTATGTTCTCTTCCATTCCTTTAATCTGATCTCTCTTTTCTTTTCTAGATTCAGCTTGACTTACTACTCCCTGGTCTCTCACTTGTAGATCGAATCGTTCTTTCTGCATGTCTGTTTTCATTCATTATGTTTTGTTCTGGATCTAAAATTTGATTTGTTCGTACGCTTTCTGGTAAATAAATTTTAGGCTCCGGCGTCGAAAATGTTCTCAATTATAGAAGAATAGACATTTTCATCGATGTGAAATTTGGTGCATTTGTCTTTTATGAATTGTGGGAAAAGTTCGTAATGTCTTTGGTTAGATCCTCAAGGCTATTACGAACTGGAACCAGGCGATGCTCTCCTAGCTGCATCAATAAATTCTGTATTTTTTTTTTTTTGTTTAAAAAAAATGTAAACTCTCCAAAATGATTTACCGAGTCGTTTTATTTTGATGATTGCCGCATTGGCTGTCTTAATAGTCGATCGGCCATGATATCCATTGTCATTCCAGAAGCTGTTGTGCCTAGATCTTGTTTCACACTAAAATTTTGTTCATTACGTCTGCTATAGTGGCCACGCAACAGGAAGATATATTTGAGCGAATTTTTGTTAAAAATTACCATTTGGTGTACACTGATGGTTGGAGAGTTGTGTGTGTGTATGTGAAAAGTGCTAACTGAAATTTAGAAATTTCTAAACCAAAGTAGATCATGTATCTATTTGATCTATGTGAATCAAATACTGAGAAGCTTGGAAGAGGATTCATGACGCATGAGATGTTCTTTTGACTTGTTCGCTTGCTTCTTTTTAAGATAATTAGGAGGGTTTATTAGGAAATTTGGAAGGGAGGAGTTGTCTGACTTATACATTTTTTTCTTTTCTTTTCTTTTCTTTTATTGATCAGATTTACTATTCCCTATCCTGTTACTTTCTTTGTCCTTTGTTTTGTACTGTCCAGGAAACAGATCACCTTTGATTTGTACTATCCTGGTATCTCATTATGTTTTATCTTTTCAACTTTATAAATTATATATCTCTTATTTCTTCATATTTTTCGTTGCTTAGAATTTCTGTAGTTTCTTTATCTTATGTTATCTTTGACTAAAGAAGGGAATCCTTTTCATTTTCCTCCCTTAACCCTGTTACTTTTTGTGTTTTTATTTCTAAATAGCCTGGGTTCTAATTTTTCTCCTCTTTTTTGTATTTTCACTTATAATGATTACAGGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCGTAAGTGATAGCTTTTTGTATTATATTCTTTTCTATATGTCATGGTACCCTCCATTGGGTTTTTGCGCTTATAACACGAATCTGCTGTTTGACAGTGGTGGCCATGTATCTCATTCATTTGAATTGGAAGCAAAATCGAAAGGAATGTTTCATGGTTCACCTGCTGTTGTCACATTCCGTGTCCCTACAAAGTCTGCTTTACAGGTCAAATGCAAATATCCTTTCAATTACAAATATATTCTGGGTTACATAAGGTTGCAGACGTTTTACCGTTCATCTTGATATTTGGATAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCTATCCCTAGAATGTCTTCTCCACTTCAAGCTTAATGATTTAAAGTCTTGTCAATTTGGTTAACTGGAGCAATACTTTTGCCTTTGCATGGAATTTATCTCTCTGGGGGCGTTATTTCAACAGGTTAAGGTATGATTCATTTCATTCTCTCAATTCTTCTATAAAACTCTTCAAGTTAATAAGCAAACAGAAGCATGCCTCTGTTGACCATTTATTGACACAACTTTTGTTTTCCTCCCTGCAGAGACTGCTCACAAAGTACGGTTCTCTGATCTCAGTGATCTCCATCATCGTTCTCTTCATCTATCTTGTGGCTAGCCCATCAAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTAATTGAAGAATGGGAAGAAGAGAAATAGGTATAACTGTGTTTTACCCAAAATTTGAGAGGATGATATATTTGGCTGATGATAATATTTTGTTGGGTTAGGAAAGGTACAGAAACTTTTTGAGTTGATAGATTTTCTTTGACCCCTAATGAAGTAGAGCCGGAGGAAACAGAGTTTAATTATAGACATCCACGAGAATCAGTTAAAAGTTCAAACAAATGGTGCCAGTAGTTGAGTTGTTGGGTTTTTTTTTTTTTTTTTTAAAGTTATATTTCGGATCTGTTCATCATGTTACTGAGTTGTTTCTTCTTTCTTAGCCATGAATCTCATCTTCATTTTCTTTGCTTCTATATAACCTCCAATGGCGAAATGATTCCAAGGTACAAGAGTCCACACCACATAAACTAAGTTTAGTTTTGATTTAATTATATCACATATATTTCAATTTGTGTTT

mRNA sequence

GACTGTTCCACATTTTTGCGTACCTAATTCATCCGACGCCTCCTTCTCCAAACTCCCATTCCGATCATCTCTCTCGCCCTAATTCCGACGATTTCATGGCCCATCCCTTTCTACCTCCTCTGATCCGTCTCCTTTTCGCTTTTCTCTTCCTCTCCTCGACCATCGCAACCTCCGATGTTCCATTCATTGTCGCCCACAAGAAGGCTTCCCTCACTCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGCCATGTATCTCATTCATTTGAATTGGAAGCAAAATCGAAAGGAATGTTTCATGGTTCACCTGCTGTTGTCACATTCCGTGTCCCTACAAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGAGACTGCTCACAAAGTACGGTTCTCTGATCTCAGTGATCTCCATCATCGTTCTCTTCATCTATCTTGTGGCTAGCCCATCAAAATCTGCTGCAAAAGGAAGCAAGAAGAAGCGTTAATTGAAGAATGGGAAGAAGAGAAATAGGTATAACTGTGTTTTACCCAAAATTTGAGAGGATGATATATTTGGCTGATGATAATATTTTGTTGGGTTAGGAAAGGTACAGAAACTTTTTGAGTTGATAGATTTTCTTTGACCCCTAATGAAGTAGAGCCGGAGGAAACAGAGTTTAATTATAGACATCCACGAGAATCAGTTAAAAGTTCAAACAAATGGTGCCAGTAGTTGAGTTGTTGGGTTTTTTTTTTTTTTTTTTAAAGTTATATTTCGGATCTGTTCATCATGTTACTGAGTTGTTTCTTCTTTCTTAGCCATGAATCTCATCTTCATTTTCTTTGCTTCTATATAACCTCCAATGGCGAAATGATTCCAAGGTACAAGAGTCCACACCACATAAACTAAGTTTAGTTTTGATTTAATTATATCACATATATTTCAATTTGTGTTT

Coding sequence (CDS)

CTGTTCCACATTTTTGCGTACCTAATTCATCCGACGCCTCCTTCTCCAAACTCCCATTCCGATCATCTCTCTCGCCCTAATTCCGACGATTTCATGGCCCATCCCTTTCTACCTCCTCTGATCCGTCTCCTTTTCGCTTTTCTCTTCCTCTCCTCGACCATCGCAACCTCCGATGTTCCATTCATTGTCGCCCACAAGAAGGCTTCCCTCACTCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGCCATGTATCTCATTCATTTGAATTGGAAGCAAAATCGAAAGGAATGTTTCATGGTTCACCTGCTGTTGTCACATTCCGTGTCCCTACAAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGAGACTGCTCACAAAGTACGGTTCTCTGA

Protein sequence

LFHIFAYLIHPTPPSPNSHSDHLSRPNSDDFMAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVRDCSQSTVL

Homology

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BLAST of MELO3C014796 vs. NCBI nr
Match: XP_008450004.1 (PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_008450005.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_016900804.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >KAA0037850.1 translocon-associated protein subunit beta [Cucumis melo var. makuwa] >TYK27227.1 translocon-associated protein subunit beta [Cucumis melo var. makuwa])

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-80
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT
Sbjct: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. NCBI nr
Match: XP_004145695.1 (translocon-associated protein subunit beta [Cucumis sativus] >KGN58234.1 hypothetical protein Csa_017549 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 6.6e-75
Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 38  PPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 97
           PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62

Query: 98  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTK 157
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAV+TFRVPTK
Sbjct: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122

Query: 158 SALQEALSTPILPLDVLADRPPEKKFEWVR 188
           SALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 123 SALQEALSTPILPLDVLADRPPEKKFEWVK 152

[Close]

BLAST of MELO3C014796 vs. NCBI nr
Match: XP_022156478.1 (translocon-associated protein subunit beta [Momordica charantia])

HSP 1 Score: 278.9 bits (712), Expect = 3.4e-71
Identity = 139/156 (89.10%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MA+P   PLIRLLFA LF++STIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MANPIQSPLIRLLFALLFVASTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDVSLNDASWP D+FDI+SGETS SWERLDAG H+SHSFELEAK+KGMFHGSPAV+T
Sbjct: 61  STAYDVSLNDASWPVDVFDIISGETSKSWERLDAGAHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEA STPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. NCBI nr
Match: XP_038894726.1 (translocon-associated protein subunit beta [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-70
Identity = 135/156 (86.54%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MA+P  PPLI LL A LF+SSTIATSDVPFIVAHKKASLTRLKSG ERVSVSIDIYN+GS
Sbjct: 1   MANPIQPPLIHLLLALLFVSSTIATSDVPFIVAHKKASLTRLKSGVERVSVSIDIYNRGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYD SLNDASWP DMFDIVSGETS SWERLDAGGH+SHSFELEAK+KG+FHGSPA++T
Sbjct: 61  STAYDASLNDASWPEDMFDIVSGETSKSWERLDAGGHISHSFELEAKTKGLFHGSPAIIT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEALSTPILPLD+LAD+PPEKK EWV+
Sbjct: 121 FRVPTKSALQEALSTPILPLDILADKPPEKKLEWVK 156

[Close]

BLAST of MELO3C014796 vs. NCBI nr
Match: XP_022935419.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_022935420.1 translocon-associated protein subunit beta isoform X2 [Cucurbita moschata])

HSP 1 Score: 271.9 bits (694), Expect = 4.2e-69
Identity = 136/156 (87.18%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MA+     LI LL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+KGMFHGSPAV+T
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. ExPASy Swiss-Prot
Match: P23438 (Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.3e-08
Identity = 40/143 (27.97%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 41  IRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLN 100
           +RLL + L     ++ ++    +   K+ L R       +++  +IYN GSS A DV L+
Sbjct: 1   MRLLASVLLALFAVSHAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS 60

Query: 101 DASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSAL 160
           D S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A VT+       +
Sbjct: 61  DDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPV 120

Query: 161 QEALSTPILPLDVLADRPPEKKF 184
               ++      +LA R  +++F
Sbjct: 121 VIGFTSAPGQGGILAQREFDRRF 143

[Close]

BLAST of MELO3C014796 vs. ExPASy Swiss-Prot
Match: Q5E9E4 (Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.5e-08
Identity = 42/141 (29.79%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 43  LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDA 102
           L FA L L +     +   ++A  K+ L R       +++  +IYN GSS A DV L+D 
Sbjct: 4   LAFAVLALFAVTQAEEGARLLA-SKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDD 63

Query: 103 SWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSALQE 162
           S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A VT+       +  
Sbjct: 64  SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI 123

Query: 163 ALSTPILPLDVLADRPPEKKF 184
             ++      +LA R  +++F
Sbjct: 124 GFTSAPGQGGILAQREFDRRF 143

[Close]

BLAST of MELO3C014796 vs. ExPASy Swiss-Prot
Match: P43308 (Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 67  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAG 126
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 127 GHVSHSFELEAKSKGMFHGSPAVVTF 153
            +VSH+  L     G F+ + A +T+
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]

BLAST of MELO3C014796 vs. ExPASy Swiss-Prot
Match: Q9CPW5 (Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07
Identity = 34/112 (30.36%), Postives = 58/112 (51.79%), Query Frame = 0


Query: 41  IRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLN 100
           +RLL   +     ++ ++    +   K+ L R       +++  +IYN GSS A DV L+
Sbjct: 1   MRLLAVVVLALLAVSQAEEGARLLASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELS 60

Query: 101 DASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTF 153
           D S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A +T+
Sbjct: 61  DDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]

BLAST of MELO3C014796 vs. ExPASy TrEMBL
Match: A0A1S3BNZ1 (Translocon-associated protein subunit beta OS=Cucumis melo OX=3656 GN=LOC103491721 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.9e-80
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT
Sbjct: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. ExPASy TrEMBL
Match: A0A5D3DTY4 (Translocon-associated protein subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001090 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.9e-80
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT
Sbjct: 61  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. ExPASy TrEMBL
Match: A0A0A0LBA3 (Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G597330 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.2e-75
Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 38  PPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 97
           PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62

Query: 98  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTK 157
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAV+TFRVPTK
Sbjct: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122

Query: 158 SALQEALSTPILPLDVLADRPPEKKFEWVR 188
           SALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 123 SALQEALSTPILPLDVLADRPPEKKFEWVK 152

[Close]

BLAST of MELO3C014796 vs. ExPASy TrEMBL
Match: A0A6J1DQQ5 (Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC111023364 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.7e-71
Identity = 139/156 (89.10%), Postives = 148/156 (94.87%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MA+P   PLIRLLFA LF++STIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS
Sbjct: 1   MANPIQSPLIRLLFALLFVASTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDVSLNDASWP D+FDI+SGETS SWERLDAG H+SHSFELEAK+KGMFHGSPAV+T
Sbjct: 61  STAYDVSLNDASWPVDVFDIISGETSKSWERLDAGAHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEA STPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. ExPASy TrEMBL
Match: A0A6J1FAK9 (Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111442301 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.0e-69
Identity = 136/156 (87.18%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 32  MAHPFLPPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 91
           MA+     LI LL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGS
Sbjct: 1   MANLIQARLIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGS 60

Query: 92  STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVT 151
           STAYDV+LNDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK+KGMFHGSPAV+T
Sbjct: 61  STAYDVTLNDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVIT 120

Query: 152 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVR 188
           FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWV+
Sbjct: 121 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVK 156

[Close]

BLAST of MELO3C014796 vs. TAIR 10
Match: AT5G14030.1 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 40  LIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 99
           LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L
Sbjct: 9   LISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTL 68

Query: 100 NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSA 159
            D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAVVTFR+PTK A
Sbjct: 69  TDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPA 128

Query: 160 LQEALSTPILPLDVLADRPPEKKFE 185
           LQEA STP+LPLD+LAD+PP K  +
Sbjct: 129 LQEAYSTPLLPLDILADKPPTKPLD 153

[Close]

BLAST of MELO3C014796 vs. TAIR 10
Match: AT5G14030.2 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 40  LIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 99
           LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L
Sbjct: 9   LISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTL 68

Query: 100 NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSA 159
            D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAVVTFR+PTK A
Sbjct: 69  TDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPA 128

Query: 160 LQEALSTPILPLDVLADRPPEKKFE 185
           LQEA STP+LPLD+LAD+PP K  +
Sbjct: 129 LQEAYSTPLLPLDILADKPPTKPLD 153

[Close]

BLAST of MELO3C014796 vs. TAIR 10
Match: AT5G14030.3 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 40  LIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 99
           LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L
Sbjct: 9   LISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTL 68

Query: 100 NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSA 159
            D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAVVTFR+PTK A
Sbjct: 69  TDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPA 128

Query: 160 LQEALSTPILPLDVLADRPPEKKFE 185
           LQEA STP+LPLD+LAD+PP K  +
Sbjct: 129 LQEAYSTPLLPLDILADKPPTKPLD 153

[Close]

BLAST of MELO3C014796 vs. TAIR 10
Match: AT5G14030.4 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 200.7 bits (509), Expect = 1.1e-51
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 40  LIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 99
           LI  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AYDV+L
Sbjct: 9   LISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAYDVTL 68

Query: 100 NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTKSA 159
            D SW    F++V+G TS SWERLDAGG +SHS ELEAK KG+F+G+PAVVTFR+PTK A
Sbjct: 69  TDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIPTKPA 128

Query: 160 LQEALSTPILPLDVLADRPPEKKFE 185
           LQEA STP+LPLD+LAD+PP K  +
Sbjct: 129 LQEAYSTPLLPLDILADKPPTKPLD 153

The following BLAST results are available for this feature:

BLAST of MELO3C014796 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450004.1	4.0e-80	99.36	PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_0084500...	[more]
XP_004145695.1	6.6e-75	96.67	translocon-associated protein subunit beta [Cucumis sativus] >KGN58234.1 hypothe...	[more]
XP_022156478.1	3.4e-71	89.10	translocon-associated protein subunit beta [Momordica charantia]	[more]
XP_038894726.1	2.2e-70	86.54	translocon-associated protein subunit beta [Benincasa hispida]	[more]
XP_022935419.1	4.2e-69	87.18	translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_0...	[more]

BLAST of MELO3C014796 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23438	7.3e-08	27.97	Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=...	[more]
Q5E9E4	9.5e-08	29.79	Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV...	[more]
P43308	1.6e-07	36.05	Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 ...	[more]
Q9CPW5	2.8e-07	30.36	Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1...	[more]

BLAST of MELO3C014796 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNZ1	1.9e-80	99.36	Translocon-associated protein subunit beta OS=Cucumis melo OX=3656 GN=LOC1034917...	[more]
A0A5D3DTY4	1.9e-80	99.36	Translocon-associated protein subunit beta OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LBA3	3.2e-75	96.67	Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G5...	[more]
A0A6J1DQQ5	1.7e-71	89.10	Translocon-associated protein subunit beta OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1FAK9	2.0e-69	87.18	Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MELO3C014796 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14030.1	1.1e-51	67.59	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.2	1.1e-51	67.59	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.3	1.1e-51	67.59	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.4	1.1e-51	67.59	translocon-associated protein beta (TRAPB) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05753	TRAP_beta	coord: 47..186 e-value: 9.0E-47 score: 158.8
None	No IPR available	PANTHER	PTHR12861	TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT	coord: 50..192
None	No IPR available	PANTHER	PTHR12861:SF6	TRANSLOCON-ASSOCIATED PROTEIN BETA (TRAPB) FAMILY PROTEIN	coord: 50..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014796.1	MELO3C014796.1	mRNA