Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTTCGTTCCAACAGAATACTTGCTCCATTGATGGCTGTTCTTTTCATGGTGATGCTTGTCACGGCGGCAGCCGACCGCCATGCAACGGCGCTGCCGTGGACGGTGGAGGAGGCTACTGAAAGAATCAGCAGCAGCAGAAATATGATAATGCGCAAGTTTGGTTATAGCAAAAGGCAAATGGAACATTTAAGAAGACTTTCTTCTTCCTCTACTGCAAGATATATTCCTGGAGGACCTGATTCTCAACATCATTCCCAACCACCTCGTTTGCCTTAG
mRNA sequence
ATGGCACTTCGTTCCAACAGAATACTTGCTCCATTGATGGCTGTTCTTTTCATGGTGATGCTTGTCACGGCGGCAGCCGACCGCCATGCAACGGCGCTGCCGTGGACGGTGGAGGAGGCTACTGAAAGAATCAGCAGCAGCAGAAATATGATAATGCGCAAGTTTGGTTATAGCAAAAGGCAAATGGAACATTTAAGAAGACTTTCTTCTTCCTCTACTGCAAGATATATTCCTGGAGGACCTGATTCTCAACATCATTCCCAACCACCTCGTTTGCCTTAG
Coding sequence (CDS)
ATGGCACTTCGTTCCAACAGAATACTTGCTCCATTGATGGCTGTTCTTTTCATGGTGATGCTTGTCACGGCGGCAGCCGACCGCCATGCAACGGCGCTGCCGTGGACGGTGGAGGAGGCTACTGAAAGAATCAGCAGCAGCAGAAATATGATAATGCGCAAGTTTGGTTATAGCAAAAGGCAAATGGAACATTTAAGAAGACTTTCTTCTTCCTCTACTGCAAGATATATTCCTGGAGGACCTGATTCTCAACATCATTCCCAACCACCTCGTTTGCCTTAG
Protein sequence
MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKRQMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP
Homology
BLAST of MELO3C014424 vs. NCBI nr
Match:
KAA0061638.1 (hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa] >TYK05869.1 hypothetical protein E5676_scaffold1465G00250 [Cucumis melo var. makuwa])
HSP 1 Score: 178.3 bits (451), Expect = 3.0e-41
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 1 MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60
MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR
Sbjct: 1 MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60
Query: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP
Sbjct: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 93
BLAST of MELO3C014424 vs. NCBI nr
Match:
KAE8647339.1 (hypothetical protein Csa_003556, partial [Cucumis sativus])
HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0
Query: 1 MALRSNRILA-PLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSK 60
MALR N+ILA PLMAVLFM MLVTAA D HATAL WTVEEATERISSS NM+MRKFGYSK
Sbjct: 1 MALRFNKILAPPLMAVLFMAMLVTAATDPHATALLWTVEEATERISSSSNMVMRKFGYSK 60
Query: 61 RQMEHLRRLSSSSTARYIPGGPDSQHHSQPP 91
RQMEHLRRLSSSST RYIPGGPDSQHHSQPP
Sbjct: 61 RQMEHLRRLSSSSTERYIPGGPDSQHHSQPP 91
BLAST of MELO3C014424 vs. NCBI nr
Match:
KAG6589262.1 (hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 111.3 bits (277), Expect = 4.5e-21
Identity = 65/91 (71.43%), Postives = 69/91 (75.82%), Query Frame = 0
Query: 3 LRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKRQM 62
LR + LAP MAVLF+ ML+ A RHAT PWT EE TE SSS MIMRKFGYSK QM
Sbjct: 4 LRFSSKLAPFMAVLFIGMLLVTVAGRHATP-PWTTEEVTE--SSSSIMIMRKFGYSKTQM 63
Query: 63 EHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
EHL+RL SSST RY PGGPDSQHHS PPRLP
Sbjct: 64 EHLKRL-SSSTERYTPGGPDSQHHSHPPRLP 90
BLAST of MELO3C014424 vs. NCBI nr
Match:
KAG6572409.1 (hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 102.8 bits (255), Expect = 1.6e-18
Identity = 64/97 (65.98%), Postives = 69/97 (71.13%), Query Frame = 0
Query: 4 RSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEAT-------ERISSSRNMIMRKFG 63
R N APL AV+FMVMLVTAAA RH ALP EEA SSS +MIMR+ G
Sbjct: 7 RFNPKFAPLTAVIFMVMLVTAAAGRH--ALPLRTEEAAAIEGGGGSSSSSSSSMIMRRLG 66
Query: 64 YSKRQMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
Y+K QMEHLRRL SSSTARYIPGGPDSQHHS+ PR P
Sbjct: 67 YTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP 100
BLAST of MELO3C014424 vs. ExPASy TrEMBL
Match:
A0A5D3C664 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00250 PE=3 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 1 MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60
MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR
Sbjct: 1 MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60
Query: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP
Sbjct: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 93
BLAST of MELO3C014424 vs. ExPASy TrEMBL
Match:
A0A0A0KGI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419510 PE=3 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 7.7e-35
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0
Query: 1 MALRSNRILA-PLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSK 60
MALR N+ILA PLMAVLFM MLVTAA D HATAL WTVEEATERISSS NM+MRKFGYSK
Sbjct: 1 MALRFNKILAPPLMAVLFMAMLVTAATDPHATALLWTVEEATERISSSSNMVMRKFGYSK 60
Query: 61 RQMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
RQMEHLRRLSSSST RYIPGGPDSQHHSQPPRLP
Sbjct: 61 RQMEHLRRLSSSSTERYIPGGPDSQHHSQPPRLP 94
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0061638.1 | 3.0e-41 | 100.00 | hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa] >TYK0586... | [more] |
KAE8647339.1 | 1.1e-32 | 89.01 | hypothetical protein Csa_003556, partial [Cucumis sativus] | [more] |
KAG6589262.1 | 4.5e-21 | 71.43 | hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6572409.1 | 1.6e-18 | 65.98 | hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C664 | 1.5e-41 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KGI4 | 7.7e-35 | 89.36 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419510 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |