MELO3C014424 (gene) Melon (DHL92) v4

Overview
NameMELO3C014424
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr05: 2530310 .. 2530591 (+)
RNA-Seq ExpressionMELO3C014424
SyntenyMELO3C014424
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTTCGTTCCAACAGAATACTTGCTCCATTGATGGCTGTTCTTTTCATGGTGATGCTTGTCACGGCGGCAGCCGACCGCCATGCAACGGCGCTGCCGTGGACGGTGGAGGAGGCTACTGAAAGAATCAGCAGCAGCAGAAATATGATAATGCGCAAGTTTGGTTATAGCAAAAGGCAAATGGAACATTTAAGAAGACTTTCTTCTTCCTCTACTGCAAGATATATTCCTGGAGGACCTGATTCTCAACATCATTCCCAACCACCTCGTTTGCCTTAG

mRNA sequence

ATGGCACTTCGTTCCAACAGAATACTTGCTCCATTGATGGCTGTTCTTTTCATGGTGATGCTTGTCACGGCGGCAGCCGACCGCCATGCAACGGCGCTGCCGTGGACGGTGGAGGAGGCTACTGAAAGAATCAGCAGCAGCAGAAATATGATAATGCGCAAGTTTGGTTATAGCAAAAGGCAAATGGAACATTTAAGAAGACTTTCTTCTTCCTCTACTGCAAGATATATTCCTGGAGGACCTGATTCTCAACATCATTCCCAACCACCTCGTTTGCCTTAG

Coding sequence (CDS)

ATGGCACTTCGTTCCAACAGAATACTTGCTCCATTGATGGCTGTTCTTTTCATGGTGATGCTTGTCACGGCGGCAGCCGACCGCCATGCAACGGCGCTGCCGTGGACGGTGGAGGAGGCTACTGAAAGAATCAGCAGCAGCAGAAATATGATAATGCGCAAGTTTGGTTATAGCAAAAGGCAAATGGAACATTTAAGAAGACTTTCTTCTTCCTCTACTGCAAGATATATTCCTGGAGGACCTGATTCTCAACATCATTCCCAACCACCTCGTTTGCCTTAG

Protein sequence

MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKRQMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP
Homology
BLAST of MELO3C014424 vs. NCBI nr
Match: KAA0061638.1 (hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa] >TYK05869.1 hypothetical protein E5676_scaffold1465G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 3.0e-41
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0

Query: 1  MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60
          MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR
Sbjct: 1  MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60

Query: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
          QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP
Sbjct: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 93

BLAST of MELO3C014424 vs. NCBI nr
Match: KAE8647339.1 (hypothetical protein Csa_003556, partial [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32
Identity = 81/91 (89.01%), Postives = 83/91 (91.21%), Query Frame = 0

Query: 1  MALRSNRILA-PLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSK 60
          MALR N+ILA PLMAVLFM MLVTAA D HATAL WTVEEATERISSS NM+MRKFGYSK
Sbjct: 1  MALRFNKILAPPLMAVLFMAMLVTAATDPHATALLWTVEEATERISSSSNMVMRKFGYSK 60

Query: 61 RQMEHLRRLSSSSTARYIPGGPDSQHHSQPP 91
          RQMEHLRRLSSSST RYIPGGPDSQHHSQPP
Sbjct: 61 RQMEHLRRLSSSSTERYIPGGPDSQHHSQPP 91

BLAST of MELO3C014424 vs. NCBI nr
Match: KAG6589262.1 (hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.3 bits (277), Expect = 4.5e-21
Identity = 65/91 (71.43%), Postives = 69/91 (75.82%), Query Frame = 0

Query: 3  LRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKRQM 62
          LR +  LAP MAVLF+ ML+   A RHAT  PWT EE TE  SSS  MIMRKFGYSK QM
Sbjct: 4  LRFSSKLAPFMAVLFIGMLLVTVAGRHATP-PWTTEEVTE--SSSSIMIMRKFGYSKTQM 63

Query: 63 EHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
          EHL+RL SSST RY PGGPDSQHHS PPRLP
Sbjct: 64 EHLKRL-SSSTERYTPGGPDSQHHSHPPRLP 90

BLAST of MELO3C014424 vs. NCBI nr
Match: KAG6572409.1 (hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-18
Identity = 64/97 (65.98%), Postives = 69/97 (71.13%), Query Frame = 0

Query: 4   RSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEAT-------ERISSSRNMIMRKFG 63
           R N   APL AV+FMVMLVTAAA RH  ALP   EEA           SSS +MIMR+ G
Sbjct: 7   RFNPKFAPLTAVIFMVMLVTAAAGRH--ALPLRTEEAAAIEGGGGSSSSSSSSMIMRRLG 66

Query: 64  YSKRQMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
           Y+K QMEHLRRL SSSTARYIPGGPDSQHHS+ PR P
Sbjct: 67  YTKSQMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP 100

BLAST of MELO3C014424 vs. ExPASy TrEMBL
Match: A0A5D3C664 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00250 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0

Query: 1  MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60
          MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR
Sbjct: 1  MALRSNRILAPLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSKR 60

Query: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
          QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP
Sbjct: 61 QMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 93

BLAST of MELO3C014424 vs. ExPASy TrEMBL
Match: A0A0A0KGI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419510 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.7e-35
Identity = 84/94 (89.36%), Postives = 86/94 (91.49%), Query Frame = 0

Query: 1  MALRSNRILA-PLMAVLFMVMLVTAAADRHATALPWTVEEATERISSSRNMIMRKFGYSK 60
          MALR N+ILA PLMAVLFM MLVTAA D HATAL WTVEEATERISSS NM+MRKFGYSK
Sbjct: 1  MALRFNKILAPPLMAVLFMAMLVTAATDPHATALLWTVEEATERISSSSNMVMRKFGYSK 60

Query: 61 RQMEHLRRLSSSSTARYIPGGPDSQHHSQPPRLP 94
          RQMEHLRRLSSSST RYIPGGPDSQHHSQPPRLP
Sbjct: 61 RQMEHLRRLSSSSTERYIPGGPDSQHHSQPPRLP 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0061638.13.0e-41100.00hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa] >TYK0586... [more]
KAE8647339.11.1e-3289.01hypothetical protein Csa_003556, partial [Cucumis sativus][more]
KAG6589262.14.5e-2171.43hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6572409.11.6e-1865.98hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C6641.5e-41100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KGI47.7e-3589.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419510 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..93
NoneNo IPR availablePANTHERPTHR36016:SF9SUBFAMILY NOT NAMEDcoord: 1..93
IPR039617CLAVATA3/ESR (CLE)-related proteinPANTHERPTHR36016CLAVATA3/ESR (CLE)-RELATED PROTEIN 7coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014424.1MELO3C014424.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment