MELO3C013674 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013674
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-type E3 ubiquitin transferase
Location	chr11: 19435503 .. 19436408 (-)
RNA-Seq Expression	MELO3C013674
Synteny	MELO3C013674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTACATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCATCGTATGCGTCATCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGAACTGTTTTCCGGTCGACCTGCGGTTCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGCCCATGGACTGGAGACCTCGATGATTCGTTTGCTACCAATATCACAGTTCAAAAAGAAAGAAGAATCTGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAATTGATTAAAAACTTACCAAATTGTAATCATTCGTTTCATAGTTCTTGTATCGATGCCTGGTTCCGTGATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTGGAGTTTCTCTACTCCTGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATATTCTACGAGAAAGAGTAGCGCATTATCAAACACTTCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGAATCGATTCAAGGATCAGATCAACGAGACCCAAACCGATGAACAAATCAATAGAGGCCGAGAAGACAGAAATTTGTGATGAAGCCGAGATATGGGCGATTTTTCTTTCAAGTATTTATTCATCTACCAATGCATCGGTGATCAGTAAAAATTTATGAATTTTCATATTTTTTCTTCGAACTTGAAATGATTGATTATATTCGATAGATAGTTTTAATTGAGTTATAGTTTATGTAATCATACTTAAACTTTGTGAAATTTGGGAATTAAATTTGTAATTATTGCAAAACAACACAAACTAATCTAAATCTTTA

mRNA sequence

ATCTTACATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCATCGTATGCGTCATCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGAACTGTTTTCCGGTCGACCTGCGGTTCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGCCCATGGACTGGAGACCTCGATGATTCGTTTGCTACCAATATCACAGTTCAAAAAGAAAGAAGAATCTGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAATTGATTAAAAACTTACCAAATTGTAATCATTCGTTTCATAGTTCTTGTATCGATGCCTGGTTCCGTGATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTGGAGTTTCTCTACTCCTGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATATTCTACGAGAAAGAGTAGCGCATTATCAAACACTTCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGAATCGATTCAAGGATCAGATCAACGAGACCCAAACCGATGAACAAATCAATAGAGGCCGAGAAGACAGAAATTTGTGATGAAGCCGAGATATGGGCGATTTTTCTTTCAAGTATTTATTCATCTACCAATGCATCGGTGATCAGTAAAAATTTATGAATTTTCATATTTTTTCTTCGAACTTGAAATGATTGATTATATTCGATAGATAGTTTTAATTGAGTTATAGTTTATGTAATCATACTTAAACTTTGTGAAATTTGGGAATTAAATTTGTAATTATTGCAAAACAACACAAACTAATCTAAATCTTTA

Coding sequence (CDS)

ATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCATCGTATGCGTCATCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGAACTGTTTTCCGGTCGACCTGCGGTTCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGCCCATGGACTGGAGACCTCGATGATTCGTTTGCTACCAATATCACAGTTCAAAAAGAAAGAAGAATCTGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGTGAATTCGAAGAAGGGGAATTGATTAAAAACTTACCAAATTGTAATCATTCGTTTCATAGTTCTTGTATCGATGCCTGGTTCCGTGATCATTCGAGTTGCCCTCTCTGCAGATTGCAAGTCTGGAGTTTCTCTACTCCTGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATATTCTACGAGAAAGAGTAGCGCATTATCAAACACTTCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGAATCGATTCAAGGATCAGATCAACGAGACCCAAACCGATGA

Protein sequence

MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQFEENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQTLRAQILQHPEFRRDESIQGSDQRDPNR

Homology

[Close]

BLAST of MELO3C013674 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18
Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 25  IVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPA--VQFEENPNNPSLQIHA-HGLETSMI 84
           +VI+ V   L + + LL+   R L      R A  V F  +P+  +  + A  GL+ ++I
Sbjct: 41  VVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVI 100

Query: 85  RLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHS 144
           + LP+  F     S+ T     ECAVCL EFEE E  + LPNC H+FH  CID WF  HS
Sbjct: 101 KSLPVFTF-----SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHS 160

Query: 145 SCPLCRLQVWSFSTPDSSSAMLE 165
           +CPLCR  V S +  +S++A  E
Sbjct: 161 TCPLCRSLVESLAGIESTAAARE 178

[Close]

BLAST of MELO3C013674 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18
Identity = 57/166 (34.34%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAV 64
           PPPPS   D       SS+SP  I+ I I+    +L+S Y L+ + C   H+  S    +
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQT-SSSETL 95

Query: 65  QFEEN-----PNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFE 124
               N      +   +  +  GL  SMI+ + + ++K  +         ++C+VCL EFE
Sbjct: 96  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEFE 155

Query: 125 EGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSS 160
           E E ++ LP CNH+FH  CID W + HS+CPLCR  V   + P +S
Sbjct: 156 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of MELO3C013674 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.7e-18
Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHEL-FSGRPAV 64
           PPPP P+        +S+   +++ I I+   FLL+S Y  + + C   H +   GR ++
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNNP----SLQIHAHGLETSMIRLLPISQFKKK----------EESESTTSFNT 124
            +   N  +P    S ++ + GL+ S+IR +PI +FKK+          E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQV---WSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W +++++CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of MELO3C013674 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-17
Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 6   PPPSPVPDYSSWSP--------------WSISTIVIVCVIFLLLSNYRLLKQLCRVLHEL 65
           PPP P P  +  SP               +I+ I I+   FLL+S Y  + + C   H++
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  FSGRPAVQFEENPNNPSLQIHAH----GLETSMIRLLPISQFKKK-----EESESTTSFN 125
              R   +   +  NP +    H    GL+ S IR +P+ +FKK+     EE +S  S  
Sbjct: 76  DIFRR--RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS-- 135

Query: 126 TECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQV 151
            EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  V
Sbjct: 136 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179

[Close]

BLAST of MELO3C013674 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 7.7e-16
Identity = 54/168 (32.14%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAV 64
           PPPPS   D       S +SP  I+ I I+   F+L+S Y L+ + C       S   A 
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  QFEE-------------------NPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTT 124
                                  NPN         GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCR 148
             +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS+CPLCR
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201

[Close]

BLAST of MELO3C013674 vs. NCBI nr
Match: XP_008448367.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa] >TYK23976.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 424.5 bits (1090), Expect = 5.4e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120
           EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180
           LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDESIQGSDQRDPNR 209
           TLRAQILQHPEFRRDESIQGSDQRDPNR
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRDPNR 208

[Close]

BLAST of MELO3C013674 vs. NCBI nr
Match: XP_031743630.1 (RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical protein Csa_023057 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 189/206 (91.75%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VC++FLLLSNYRLLKQLCRVLH LF+GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPD-SSSAMLETLGRENILRERVAHY 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQV SFSTPD SSSAMLETLGREN+LRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 QTLRAQILQHPEFRRDESIQGSDQRD 206
           QTLRAQILQHPEFRRD SIQG+DQR+
Sbjct: 181 QTLRAQILQHPEFRRDASIQGTDQRN 206

[Close]

BLAST of MELO3C013674 vs. NCBI nr
Match: KAG6570731.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010575.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.9 bits (847), Expect = 8.1e-87
Identity = 165/212 (77.83%), Postives = 183/212 (86.32%), Query Frame = 0


Query: 1   MPSS---PPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPA 60
           MPSS   PPPPSPVPDYSSWSPWSIS I IVC++ LLLSNYR+LK+ CRVLH LF GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVLHGLFCGRFV 60

Query: 61  VQFEENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGEL 120
           VQF+ENPN+PS ++H HGLE S IRLLPISQFKK EE+EST S NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPEVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFS----TPDSSSAMLETLGRENILR 180
           IKNLPNCNHSFHSSCIDAW R+HSSCPLCRL V + S    TPDSSSAMLETLGRE++ R
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLGREDVER 180

Query: 181 ERVAHYQTLRAQILQHPEFRRDESIQGSDQRD 206
           ERV++YQTLRAQILQ+PE RRD S+QGSDQR+
Sbjct: 181 ERVSYYQTLRAQILQNPELRRDASVQGSDQRN 212

[Close]

BLAST of MELO3C013674 vs. NCBI nr
Match: XP_023512261.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.1 bits (832), Expect = 4.4e-85
Identity = 162/212 (76.42%), Postives = 180/212 (84.91%), Query Frame = 0


Query: 1   MPSS---PPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPA 60
           MPSS   PPPPSPVPDYSSWSPWSIS I IVC++ LLLSNYR+LK+ CRV H LF GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVFHGLFCGRSV 60

Query: 61  VQFEENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGEL 120
           VQF+ENPN+PS Q+H HGLE S IRLLPISQFKK EE+EST S NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPQVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFS----TPDSSSAMLETLGRENILR 180
           IKNLPNCNHSFHSSCIDAW R+HSSCPLCRL V + S    TPDSSSAMLETL RE++  
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLSREDVDG 180

Query: 181 ERVAHYQTLRAQILQHPEFRRDESIQGSDQRD 206
           ERV++YQTLRAQILQ+P+ RRD S+QGSDQR+
Sbjct: 181 ERVSYYQTLRAQILQNPDLRRDASVQGSDQRN 212

[Close]

BLAST of MELO3C013674 vs. NCBI nr
Match: XP_031247518.1 (RING-H2 finger protein ATL16-like [Pistacia vera])

HSP 1 Score: 178.3 bits (451), Expect = 6.7e-41
Identity = 95/197 (48.22%), Postives = 121/197 (61.42%), Query Frame = 0


Query: 3   SSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQ--- 62
           SS P P+P+    SW+P  +S + + C IFLL S Y  LK+LC       + R   Q   
Sbjct: 2   SSSPSPAPIYKPPSWNPLVVSLVALTCTIFLLFSYYNYLKKLCCCAFNRGNSRNPDQRQL 61

Query: 63  -FEENPNNPSLQIHAHGLETSMIRLLPISQFKK---KEESESTTSFNTECAVCLGEFEEG 122
             E N ++PSLQ ++HGLE+S+I  LPI+QFKK   KEE E     N+EC VCLGEFEEG
Sbjct: 62  LNEANFDDPSLQFNSHGLESSIIHSLPITQFKKNINKEEEEELQPRNSECGVCLGEFEEG 121

Query: 123 ELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSS----AMLETLGRENI 182
           E +K+LPNC+H+FH  CID WF  HS+CPLCR Q +  + P   S     +LE L RE+ 
Sbjct: 122 EWLKHLPNCSHAFHIPCIDTWFHSHSNCPLCRSQAFDLTIPHECSVSMYTLLENLRREDF 181

Query: 183 LRERVAHYQTLRAQILQ 189
             ER  HYQ LR  +LQ
Sbjct: 182 FHERATHYQILRTAVLQ 198

[Close]

BLAST of MELO3C013674 vs. ExPASy TrEMBL
Match: A0A5A7V3S2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00390 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.6e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120
           EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180
           LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDESIQGSDQRDPNR 209
           TLRAQILQHPEFRRDESIQGSDQRDPNR
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRDPNR 208

[Close]

BLAST of MELO3C013674 vs. ExPASy TrEMBL
Match: A0A1S3BIX6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.6e-115
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120
           EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180
           LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDESIQGSDQRDPNR 209
           TLRAQILQHPEFRRDESIQGSDQRDPNR
Sbjct: 181 TLRAQILQHPEFRRDESIQGSDQRDPNR 208

[Close]

BLAST of MELO3C013674 vs. ExPASy TrEMBL
Match: A0A0A0KCA5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.0e-104
Identity = 189/206 (91.75%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VC++FLLLSNYRLLKQLCRVLH LF+GRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPD-SSSAMLETLGRENILRERVAHY 180
           LPNCNHSFHS CIDAWFR+HSSCPLCRLQV SFSTPD SSSAMLETLGREN+LRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 QTLRAQILQHPEFRRDESIQGSDQRD 206
           QTLRAQILQHPEFRRD SIQG+DQR+
Sbjct: 181 QTLRAQILQHPEFRRDASIQGTDQRN 206

[Close]

BLAST of MELO3C013674 vs. ExPASy TrEMBL
Match: A0A6A6KKG1 (RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 98/198 (49.49%), Postives = 129/198 (65.15%), Query Frame = 0


Query: 1   MPSSPPPPS--PVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAV 60
           MP SP P +   + +   W+P+ I  +V VC   ++ S YR+LK+LC  L+ L   R   
Sbjct: 1   MPLSPTPAAQHQLENSPEWNPYVIGPVVAVCTFIVMFSYYRILKRLCCSLNTLTFSRNRF 60

Query: 61  QF----EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEE 120
           Q     E +  + SLQ  +HGLE++++  LPISQFKK++E ES TS N+ECAVCLGEFEE
Sbjct: 61  QMRRIGENSLGDSSLQYFSHGLESAIMCSLPISQFKKEKEEESRTS-NSECAVCLGEFEE 120

Query: 121 GELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSA--MLETLGRENIL 180
           GE +K+LP C H FH +CID WF+ HS+CPLCR QV+  S   S S   +LETL RE+ L
Sbjct: 121 GEWLKHLPICAHVFHVACIDTWFQTHSNCPLCRSQVYDLSHEYSISVSILLETLRREDFL 180

Query: 181 RERVAHYQTLRAQILQHP 191
            ER  HYQ LR +IL +P
Sbjct: 181 HERAKHYQILRPEILGNP 197

[Close]

BLAST of MELO3C013674 vs. ExPASy TrEMBL
Match: A0A2C9W1B6 (RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G030200 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 94/197 (47.72%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MPSSPPPPSP--VPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAV 60
           MP SP P +P  + +YS W+ + I  ++ VC   +L S YR+L++LC  L+     R   
Sbjct: 1   MPPSPTPEAPLRLENYSQWNAYVIGPVIAVCSSVVLFSYYRMLRRLCCTLNTQTLPRNRA 60

Query: 61  QF----EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEE 120
           Q     + N  + SLQ ++HGLE++++R LPISQFKK+EESE++   N ECAVCLGEFEE
Sbjct: 61  QMSRINQNNLEDSSLQNYSHGLESNIMRSLPISQFKKEEESEAS---NRECAVCLGEFEE 120

Query: 121 GELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSS--AMLETLGRENIL 180
           GE +K+LPNC H FH +CID WF+ HS+CPLCR  V+      S S   +L TL RE+  
Sbjct: 121 GEWLKHLPNCAHVFHVACIDTWFQTHSNCPLCRSHVYDLCHEYSISMDTLLHTLRREDFF 180

Query: 181 RERVAHYQTLRAQILQH 190
            ER  HYQ LR++IL++
Sbjct: 181 NERAEHYQNLRSEILRN 194

[Close]

BLAST of MELO3C013674 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 57/143 (39.86%), Postives = 79/143 (55.24%), Query Frame = 0


Query: 25  IVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPA--VQFEENPNNPSLQIHA-HGLETSMI 84
           +VI+ V   L + + LL+   R L      R A  V F  +P+  +  + A  GL+ ++I
Sbjct: 41  VVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVI 100

Query: 85  RLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHS 144
           + LP+  F     S+ T     ECAVCL EFEE E  + LPNC H+FH  CID WF  HS
Sbjct: 101 KSLPVFTF-----SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHS 160

Query: 145 SCPLCRLQVWSFSTPDSSSAMLE 165
           +CPLCR  V S +  +S++A  E
Sbjct: 161 TCPLCRSLVESLAGIESTAAARE 178

[Close]

BLAST of MELO3C013674 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 57/166 (34.34%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAV 64
           PPPPS   D       SS+SP  I+ I I+    +L+S Y L+ + C   H+  S    +
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQT-SSSETL 95

Query: 65  QFEEN-----PNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFE 124
               N      +   +  +  GL  SMI+ + + ++K  +         ++C+VCL EFE
Sbjct: 96  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEFE 155

Query: 125 EGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSS 160
           E E ++ LP CNH+FH  CID W + HS+CPLCR  V   + P +S
Sbjct: 156 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of MELO3C013674 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19
Identity = 65/195 (33.33%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHEL-FSGRPAV 64
           PPPP P+        +S+   +++ I I+   FLL+S Y  + + C   H +   GR ++
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNNP----SLQIHAHGLETSMIRLLPISQFKKK----------EESESTTSFNT 124
            +   N  +P    S ++ + GL+ S+IR +PI +FKK+          E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQV---WSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W +++++CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of MELO3C013674 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 0


Query: 6   PPPSPVPDYSSWSP--------------WSISTIVIVCVIFLLLSNYRLLKQLCRVLHEL 65
           PPP P P  +  SP               +I+ I I+   FLL+S Y  + + C   H++
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  FSGRPAVQFEENPNNPSLQIHAH----GLETSMIRLLPISQFKKK-----EESESTTSFN 125
              R   +   +  NP +    H    GL+ S IR +P+ +FKK+     EE +S  S  
Sbjct: 76  DIFRR--RRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNS-- 135

Query: 126 TECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCRLQV 151
            EC+VCL EF+E E ++ +PNC H FH  CID W + +++CPLCR  V
Sbjct: 136 QECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSV 179

[Close]

BLAST of MELO3C013674 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.5e-17
Identity = 54/168 (32.14%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAV 64
           PPPPS   D       S +SP  I+ I I+   F+L+S Y L+ + C       S   A 
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  QFEE-------------------NPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTT 124
                                  NPN         GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKNLPNCNHSFHSSCIDAWFRDHSSCPLCR 148
             +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS+CPLCR
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 201

The following BLAST results are available for this feature:

BLAST of MELO3C013674 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	1.7e-18	39.86	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LF64	2.2e-18	34.34	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	3.7e-18	33.33	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	3.1e-17	35.12	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9SRQ8	7.7e-16	32.14	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of MELO3C013674 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448367.1	5.4e-115	100.00	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H...	[more]
XP_031743630.1	1.2e-103	91.75	RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical pro...	[more]
KAG6570731.1	8.1e-87	77.83	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023512261.1	4.4e-85	76.42	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_031247518.1	6.7e-41	48.22	RING-H2 finger protein ATL16-like [Pistacia vera]	[more]

BLAST of MELO3C013674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3S2	2.6e-115	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BIX6	2.6e-115	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 ...	[more]
A0A0A0KCA5	6.0e-104	91.75	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE...	[more]
A0A6A6KKG1	4.7e-40	49.49	RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318...	[more]
A0A2C9W1B6	1.0e-39	47.72	RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G0302...	[more]

BLAST of MELO3C013674 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	1.2e-19	39.86	TOXICOS EN LEVADURA 2	[more]
AT5G17600.1	1.5e-19	34.34	RING/U-box superfamily protein	[more]
AT5G43420.1	2.6e-19	33.33	RING/U-box superfamily protein	[more]
AT1G04360.1	2.2e-18	35.12	RING/U-box superfamily protein	[more]
AT3G03550.1	5.5e-17	32.14	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 105..146 e-value: 8.4E-7 score: 38.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 104..147 e-value: 4.4E-13 score: 49.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 105..147 score: 12.533537
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 64..151 e-value: 3.0E-21 score: 76.9
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 14..158
None	No IPR available	PANTHER	PTHR45676:SF107	RING/U-BOX SUPERFAMILY PROTEIN	coord: 14..158
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 104..147 e-value: 7.47019E-17 score: 69.2529
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013674.1	MELO3C013674.1	mRNA