MELO3C013618 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013618
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	CASP-like protein
Location	chr11: 18184006 .. 18184775 (-)
RNA-Seq Expression	MELO3C013618
Synteny	MELO3C013618

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTACAAAAATTCCACTCTCCACATATTAATATTAATATTCATATTCATATTATTTAGTTTATTAATACGCCGTCGCTGCTTGCCTCCTCAAACAAAATTGCCTTCTACTTTTCTCTTACGCTCTAATTTCTAATTTTCCCTCAAAACACTTTCTCTAATACATACTTTTTCAATATGAAGAAATCGGGTTTCATCGCCGCCTCCGTTGCCGCCGCATCCGCCTCCGCCGCCGTCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACTCAAAAGTTCAATTCCCTCGCCAGGTTTACCATTTTCCCTCTTTAAAAAATCAATCCTCTAAGAATTTGAACCCTCGGTTTTTTTGTTTGATCCTGTAAATTTCTTGTCTTTTGAGATTTGGGATGTTTTAATTATGCAGGAGGGAAAGGAAGGAGAGAACTCTTCTTCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGAACTGCGCCGGCGACGGCGACGTTCGTGGTTGCATTTGCGGAGAAGGGACCCACCGTGGCCGCAACTTTGTATGTTGCCTACCTTTATTGTTAATTCTTCTTCTTCTTCTTCTTCTTCTTTTTTAATTTATGTTGTCAAAAGAAATGATAGATGCTAGGAAATATTGTTGGAAGTCTCTTATTTTGGACATTAAAGAATAATAATTTTTAGTTTATATTTTTCATTATTTTAATGAAAAATTAGCAAAAGATGG

mRNA sequence

AATTACAAAAATTCCACTCTCCACATATTAATATTAATATTCATATTCATATTATTTAGTTTATTAATACGCCGTCGCTGCTTGCCTCCTCAAACAAAATTGCCTTCTACTTTTCTCTTACGCTCTAATTTCTAATTTTCCCTCAAAACACTTTCTCTAATACATACTTTTTCAATATGAAGAAATCGGGTTTCATCGCCGCCTCCGTTGCCGCCGCATCCGCCTCCGCCGCCGTCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACTCAAAAGTTCAATTCCCTCGCCAGGAGGGAAAGGAAGGAGAGAACTCTTCTTCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGAACTGCGCCGGCGACGGCGACGTTCGTGGTTGCATTTGCGGAGAAGGGACCCACCGTGGCCGCAACTTTGTATGTTGCCTACCTTTATTGTTAATTCTTCTTCTTCTTCTTCTTCTTCTTTTTTAATTTATGTTGTCAAAAGAAATGATAGATGCTAGGAAATATTGTTGGAAGTCTCTTATTTTGGACATTAAAGAATAATAATTTTTAGTTTATATTTTTCATTATTTTAATGAAAAATTAGCAAAAGATGG

Coding sequence (CDS)

ATGAAGAAATCGGGTTTCATCGCCGCCTCCGTTGCCGCCGCATCCGCCTCCGCCGCCGTCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACTCAAAAGTTCAATTCCCTCGCCAGGAGGGAAAGGAAGGAGAGAACTCTTCTTCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGA

Protein sequence

MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPKFDGLRFIETLVTAHR

Homology

[Close]

BLAST of MELO3C013618 vs. NCBI nr
Match: XP_004139940.2 (cell wall integrity and stress response component 1 [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 4.5e-24
Identity = 72/86 (83.72%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGEN------------SS 60
          MKKSGFIAASVAAASASAAVASPSSSTLVCN KV FPRQEGKEGEN            SS
Sbjct: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60

Query: 61 SSSSTDKFAPKFDGLRFIETLVTAHR 75
          SSSSTDKFAPKFDGLRFIETLVTAHR
Sbjct: 61 SSSSTDKFAPKFDGLRFIETLVTAHR 86

[Close]

BLAST of MELO3C013618 vs. NCBI nr
Match: XP_038902353.1 (uncharacterized protein LOC120088987 [Benincasa hispida])

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-21
Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPKF 60
          MKKSGFIAASVAAA+ S   ASPSSSTLVCN KVQFPRQEGKEGEN  SSSSTDKFAPKF
Sbjct: 1  MKKSGFIAASVAAAAVS---ASPSSSTLVCNPKVQFPRQEGKEGEN--SSSSTDKFAPKF 60

Query: 61 DGLRFIETLVTAHR 75
          DGLRFIETLVTAHR
Sbjct: 61 DGLRFIETLVTAHR 69

[Close]

BLAST of MELO3C013618 vs. NCBI nr
Match: XP_022140652.1 (uncharacterized protein LOC111011258 [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 2.2e-18
Identity = 62/74 (83.78%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPKF 60
          MKKS FIAASVA ASA A  ASPSSST VCN KVQFPRQEGK  ENSSSS+  DKFAPKF
Sbjct: 1  MKKSAFIAASVAGASA-AVSASPSSSTFVCNPKVQFPRQEGKVEENSSSSA--DKFAPKF 60

Query: 61 DGLRFIETLVTAHR 75
          DGLRFIETLVTAHR
Sbjct: 61 DGLRFIETLVTAHR 71

[Close]

BLAST of MELO3C013618 vs. NCBI nr
Match: KAG7010372.1 (hypothetical protein SDJN02_27165, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102.1 bits (253), Expect = 2.2e-18
Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAA-VASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPK 60
          MKKSGFIAASV AA+A+AA  ASPSSST+ CN KVQ PRQEGKEGEN SSS+  DKFAPK
Sbjct: 1  MKKSGFIAASVVAAAAAAAESASPSSSTIFCNLKVQLPRQEGKEGENPSSSA--DKFAPK 60

Query: 61 FDGLRFIETLVTAHR 75
          FDGL+FI+TLVTAHR
Sbjct: 61 FDGLKFIKTLVTAHR 73

[Close]

BLAST of MELO3C013618 vs. NCBI nr
Match: KAG6570510.1 (hypothetical protein SDJN03_29425, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 1.1e-17
Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPKF 60
          MKKSGFIAASV AA+A +  ASPSSST+ CN KVQ PRQEGKEGEN SSS+  DKFAPKF
Sbjct: 1  MKKSGFIAASVVAAAAES--ASPSSSTIFCNLKVQLPRQEGKEGENPSSSA--DKFAPKF 60

Query: 61 DGLRFIETLVTAHR 75
          DGL+FI+TLVTAHR
Sbjct: 61 DGLKFIKTLVTAHR 70

[Close]

BLAST of MELO3C013618 vs. ExPASy TrEMBL
Match: A0A6J1CHM8 (uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011258 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-18
Identity = 62/74 (83.78%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPKF 60
          MKKS FIAASVA ASA A  ASPSSST VCN KVQFPRQEGK  ENSSSS+  DKFAPKF
Sbjct: 1  MKKSAFIAASVAGASA-AVSASPSSSTFVCNPKVQFPRQEGKVEENSSSSA--DKFAPKF 60

Query: 61 DGLRFIETLVTAHR 75
          DGLRFIETLVTAHR
Sbjct: 61 DGLRFIETLVTAHR 71

[Close]

BLAST of MELO3C013618 vs. ExPASy TrEMBL
Match: A0A6J1I1D6 (uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17
Identity = 61/75 (81.33%), Postives = 65/75 (86.67%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKE-GENSSSSSSTDKFAPK 60
          MKKSGFIAAS+AAASA A  ASPSSSTL C+ K+Q PRQE KE GENSSSS+  DKFAPK
Sbjct: 1  MKKSGFIAASIAAASA-AVSASPSSSTLFCDPKIQLPRQEEKELGENSSSSA--DKFAPK 60

Query: 61 FDGLRFIETLVTAHR 75
          FDGLRFIETLVTAHR
Sbjct: 61 FDGLRFIETLVTAHR 72

[Close]

BLAST of MELO3C013618 vs. ExPASy TrEMBL
Match: E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.2e-15
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQE---GKEGENSSS--SSSTDK 60
          MKKSGF AASVAAASA+ A+++PSSS  +CNSK+Q  R E   GK+ ENS S  SSS D+
Sbjct: 1  MKKSGFFAASVAAASAT-AISAPSSSGFLCNSKIQLSRDEAVAGKDIENSESQRSSSADR 60

Query: 61 FAPKFDGLRFIETLVTAHR 75
          FAP+FDGLRFIETLVTAHR
Sbjct: 61 FAPRFDGLRFIETLVTAHR 78

[Close]

BLAST of MELO3C013618 vs. ExPASy TrEMBL
Match: A0A2C9US41 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G147000 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12
Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 1   MKKSGFIAASVAAASASAAVASPSSST--LVCNSKVQFPRQEGKEGENSSSSSSTDKFAP 60
           MKKSGF AASVAAASA+A  ASPSSST    CNS +    +E    ++   ++ST+KFAP
Sbjct: 44  MKKSGFFAASVAAASATAISASPSSSTSSFSCNSNMHLSPEEASSNKDQQRTASTNKFAP 103

Query: 61  KFDGLRFIETLVTAHR 75
           +FDGLRFIETLVTAHR
Sbjct: 104 RFDGLRFIETLVTAHR 119

[Close]

BLAST of MELO3C013618 vs. ExPASy TrEMBL
Match: A0A6J1AJZ1 (uncharacterized protein LOC110418707 OS=Herrania umbratica OX=108875 GN=LOC110418707 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12
Identity = 51/78 (65.38%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASA--AVASPSSSTLVCNSKVQFPRQEGKEGENSS--SSSSTDKF 60
          MKK G  AASVAAASA+A  A +SPSSS   CNS  QF  +E KE E S+   S S DKF
Sbjct: 1  MKKPGLFAASVAAASATAISASSSPSSSNFACNSNFQFSSEEKKEHEGSAIKKSPSKDKF 60

Query: 61 APKFDGLRFIETLVTAHR 75
          AP+FDGLRFIETL+TAHR
Sbjct: 61 APRFDGLRFIETLITAHR 78

[Close]

BLAST of MELO3C013618 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 3.6e-11
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQ--FPRQEGKEGENSSSSSSTD---- 60
          MKK+G IAAS++ A+++ A+++ S++T V  S  +    RQE KE +     SS D    
Sbjct: 1  MKKTGIIAASISVAASATAISAGSTNTSVSFSSPESNLSRQEAKEKQRKKKGSSEDGGDE 60

Query: 61 KFAPKFDGLRFIETLVTAHR 75
          KFAP+FDGLRFIETLVTAHR
Sbjct: 61 KFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of MELO3C013618 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 2.5e-04
Identity = 34/74 (45.95%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNSKVQFPRQEGKEGENSSSSSSTDKFAPKF 60
          MK S  + ASV A S +A     SSS+++       P    K  E S  ++ +D F P+F
Sbjct: 1  MKVSSGVVASVIAVSTAAL----SSSSIL-------PPVSPKVWE-SRKTNGSDNFEPRF 60

Query: 61 DGLRFIETLVTAHR 75
          DGLRFIETLVTAHR
Sbjct: 61 DGLRFIETLVTAHR 62

The following BLAST results are available for this feature:

BLAST of MELO3C013618 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C013618 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139940.2	4.5e-24	83.72	cell wall integrity and stress response component 1 [Cucumis sativus]	[more]
XP_038902353.1	1.2e-21	89.19	uncharacterized protein LOC120088987 [Benincasa hispida]	[more]
XP_022140652.1	2.2e-18	83.78	uncharacterized protein LOC111011258 [Momordica charantia]	[more]
KAG7010372.1	2.2e-18	80.00	hypothetical protein SDJN02_27165, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570510.1	1.1e-17	78.38	hypothetical protein SDJN03_29425, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C013618 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHM8	1.1e-18	83.78	uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1I1D6	1.2e-17	81.33	uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626...	[more]
E0CTD2	9.2e-15	69.62	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=...	[more]
A0A2C9US41	1.1e-12	63.16	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G147000 PE=4 SV=...	[more]
A0A6J1AJZ1	1.5e-12	65.38	uncharacterized protein LOC110418707 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]

BLAST of MELO3C013618 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28290.1	3.6e-11	51.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G42110.1	2.5e-04	45.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..56
None	No IPR available	PANTHER	PTHR34683	EXPRESSED PROTEIN-RELATED	coord: 1..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013618.1	MELO3C013618.1	mRNA