MELO3C012623.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C012623.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Zinc finger protein CONSTANS-LIKE 5
Location	chr01: 20511647 .. 20513798 (+)
RNA-Seq Expression	MELO3C012623.jh1
Synteny	MELO3C012623.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCACAAAACACACACACACACACACACACACATATATCTTCTATATGTGTATATATTTATATCCATGATCTAAAAGCAAACATCCAATCCCAAAAGAACCAAAACCAAACCCTTTGTCTTTTTTATTTTTCAATTTGTAGTTCCCATTACCCCAACAATTGTATGGCTTCAATTATTCCCGATCAATTCTACTATGACGATCACTACACATCCTCTGCAGCTCCTCCTCCAACGGCGGCGTCTGTCGGCGGCCCATTCTGGGGAGATCATGATGAAACTGCTGATAATTTAGTTCCTTTGTTGGAGGATGATAATTTTGGGGCTCTTCATCGTCGTCGTCGTCATCATCAACCTTATACTGATCATCATAATCAATATTATCCTTCTTCTGATATTATTGATCCGGCTACGTGGTCGTTTCCTCAACAAGACATGCTACCCTCGTTTCCTTCCCATTCCCATCAGAATAATAATAATAATGCAAGAGGATCATCATGTCAAGATTTTAATTGCCATCTTGGATGTCAATTACCATACCATCAATTGTTCTATGAATTTCAGGACGATTGTTTCGGATTGGTGCCTGAGATCAAACCATCATTTTATAATAATAATCCTCTCCCTACCCATAATGGGGTATGTTATGTATCCTCTCTTGATCGCTTCTTTTCTCGTATAATTATTATTAAATTTATGTTTCAGAGGAATAATTTTAATGATTTGCTCATTTCTTCCTCATCAATTAATAATAATGATTTGAGATTATATAGGACAACCAAAGCAATCAAGTTTCTGTAGCTGAGGACTCAAACATGAAAGTCGGCCGCTATTCTGAAGAAGTAAGAAAACAAAGGATCCTGCGTTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATCAAGGTATCTACTTCTCTCTCTTTCTCAACAATAATTAGTTGTAATAATCTCCTCTCATGTATACAATATAACACCATAATAATTAAACCATAACTATCATCTATATATGATTTTCATTGGACTTATAATAATAGTAAAATTGTCAAAAATAGAAAAATTAACAAAATATTTACAAAAATTTTATAGTTTGTTTGCTTTTTTCTAGTTTTGAAAAAAATCCCATAATAATATAATAATTAAATTTATCATAGTAGCACACTAGGCTTTTAACCATTCAGTAATGGGATTTTACAAACCAATTCTGAAGTGGACAATTAAAATCAACCTCAAATATTTTTGTAATCATTCAAAAAAAAAAAAAAAGATTTTGATGATTATATAAAATTTTTATTTAAAATAGTAAATTTTAATATTACATTAATTGGAAGTGATTAAAGAGGTTTTCAAAACAATGTTTTGAACTTGAGAAAAGTATTATTTTCAACCATTTTAAATTACTCTCAAATATAACACTAAGAGTAGGAGTGAATTAAAGTATAAATATAATTAAATTTAATATAACCCATCGACTTTTAATACAGTATGCATGTCGGAAAACCTTAGCAGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAATGAAGCAATATCTGATCAAGAAGTTAATCCAACGACAATGAATAATGACACTACTATTCAAAAAGACACTGAATTACTATACAACCACCATGATTTTGGTGTCCAGGTATCTAATTTAATATTATAATTTCTTAATATTAGAAAGAGTGATGATTTTTTTATTATAATGAATGAGAAAAGGAAAAAGATTCGTAAATTGATAAAACATTTTATGGTTTGAATAATTTTTGCAGATGAAAAGGGACGAGGAAGAATGGCTACAAGAAATCTCGAGCATAATGTATCTACCATATATCAGTAGTTGAGATATGGAAATTGATGAAGATGATCCAAAGGAGCGGCAAAAAAGAGGAAACTCTTCAAATATTATAAACTATTATAATTGGTGGTGGTAGCTATATTTATATATAGCGTATTTTAATTAATTGATTAATTTGACCAACTAAAACTGTTTCCCGATTATGTGTTAATTTTAATTTTAAGGACATTCCTAGAATTTTGAAACATAGGAGAGACTAACACACACAATACAAGGAATCTAATTATGTTTTCGACTTCGTCTTTTGAGGTCGATTAATTAATTTGAATGAATGATTTTAT

mRNA sequence

CCCACAAAACACACACACACACACACACACACATATATCTTCTATATGTGTATATATTTATATCCATGATCTAAAAGCAAACATCCAATCCCAAAAGAACCAAAACCAAACCCTTTGTCTTTTTTATTTTTCAATTTGTAGTTCCCATTACCCCAACAATTGTATGGCTTCAATTATTCCCGATCAATTCTACTATGACGATCACTACACATCCTCTGCAGCTCCTCCTCCAACGGCGGCGTCTGTCGGCGGCCCATTCTGGGGAGATCATGATGAAACTGCTGATAATTTAGTTCCTTTGTTGGAGGATGATAATTTTGGGGCTCTTCATCGTCGTCGTCGTCATCATCAACCTTATACTGATCATCATAATCAATATTATCCTTCTTCTGATATTATTGATCCGGCTACGTGGTCGTTTCCTCAACAAGACATGCTACCCTCGTTTCCTTCCCATTCCCATCAGAATAATAATAATAATGCAAGAGGATCATCATGTCAAGATTTTAATTGCCATCTTGGATGTCAATTACCATACCATCAATTGTTCTATGAATTTCAGGACGATTGTTTCGGATTGGTGCCTGAGATCAAACCATCATTTTATAATAATAATCCTCTCCCTACCCATAATGGGGACAACCAAAGCAATCAAGTTTCTGTAGCTGAGGACTCAAACATGAAAGTCGGCCGCTATTCTGAAGAAGTAAGAAAACAAAGGATCCTGCGTTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATCAAGTATGCATGTCGGAAAACCTTAGCAGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAATGAAGCAATATCTGATCAAGAAGTTAATCCAACGACAATGAATAATGACACTACTATTCAAAAAGACACTGAATTACTATACAACCACCATGATTTTGGTGTCCAGATGAAAAGGGACGAGGAAGAATGGCTACAAGAAATCTCGAGCATAATGTATCTACCATATATCAGTAGTTGAGATATGGAAATTGATGAAGATGATCCAAAGGAGCGGCAAAAAAGAGGAAACTCTTCAAATATTATAAACTATTATAATTGGTGGTGGTAGCTATATTTATATATAGCGTATTTTAATTAATTGATTAATTTGACCAACTAAAACTGTTTCCCGATTATGTGTTAATTTTAATTTTAAGGACATTCCTAGAATTTTGAAACATAGGAGAGACTAACACACACAATACAAGGAATCTAATTATGTTTTCGACTTCGTCTTTTGAGGTCGATTAATTAATTTGAATGAATGATTTTAT

Coding sequence (CDS)

ATGGCTTCAATTATTCCCGATCAATTCTACTATGACGATCACTACACATCCTCTGCAGCTCCTCCTCCAACGGCGGCGTCTGTCGGCGGCCCATTCTGGGGAGATCATGATGAAACTGCTGATAATTTAGTTCCTTTGTTGGAGGATGATAATTTTGGGGCTCTTCATCGTCGTCGTCGTCATCATCAACCTTATACTGATCATCATAATCAATATTATCCTTCTTCTGATATTATTGATCCGGCTACGTGGTCGTTTCCTCAACAAGACATGCTACCCTCGTTTCCTTCCCATTCCCATCAGAATAATAATAATAATGCAAGAGGATCATCATGTCAAGATTTTAATTGCCATCTTGGATGTCAATTACCATACCATCAATTGTTCTATGAATTTCAGGACGATTGTTTCGGATTGGTGCCTGAGATCAAACCATCATTTTATAATAATAATCCTCTCCCTACCCATAATGGGGACAACCAAAGCAATCAAGTTTCTGTAGCTGAGGACTCAAACATGAAAGTCGGCCGCTATTCTGAAGAAGTAAGAAAACAAAGGATCCTGCGTTATTTGAAGAAAAGAAACCAAAGAAATTTCAACAAAACCATCAAGTATGCATGTCGGAAAACCTTAGCAGACAGAAGGATTCGAGTCCGAGGGAGATTTGCAAGGAACAATGAAGCAATATCTGATCAAGAAGTTAATCCAACGACAATGAATAATGACACTACTATTCAAAAAGACACTGAATTACTATACAACCACCATGATTTTGGTGTCCAGATGAAAAGGGACGAGGAAGAATGGCTACAAGAAATCTCGAGCATAATGTATCTACCATATATCAGTAGTTGA

Protein sequence

MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS

Homology

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BLAST of MELO3C012623.jh1 vs. NCBI nr
Match: XP_008447123.1 (PREDICTED: uncharacterized protein LOC103489646 [Cucumis melo])

HSP 1 Score: 591 bits (1524), Expect = 2.00e-213
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRR 60
           MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRR
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRR 60

Query: 61  HHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLG 120
           HHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLG
Sbjct: 61  HHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLG 120

Query: 121 CQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSE 180
           CQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSE
Sbjct: 121 CQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSE 180

Query: 181 EVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMN 240
           EVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMN
Sbjct: 181 EVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMN 240

Query: 241 NDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
           NDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS
Sbjct: 241 NDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284

[Close]

BLAST of MELO3C012623.jh1 vs. NCBI nr
Match: KAA0051090.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa])

HSP 1 Score: 582 bits (1500), Expect = 1.02e-209
Identity = 283/287 (98.61%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVG---GPFWGDHDETADNLVPLLEDDNFGALHR 60
           MASIIPDQFYYDDHYTSSAAPPPTAASVG   GPFWGDHDETADNLVPLLEDDNFGALHR
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120
           RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180
           HLGCQLP HQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240
           YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT
Sbjct: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
           TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 287

[Close]

BLAST of MELO3C012623.jh1 vs. NCBI nr
Match: TYK02679.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa])

HSP 1 Score: 528 bits (1361), Expect = 6.77e-189
Identity = 260/287 (90.59%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVG---GPFWGDHDETADNLVPLLEDDNFGALHR 60
           MASIIPDQFYYDDHYTSSAAPPPTAASVG   GPFWGDHDETADNLVPLLEDDNFGALHR
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120
           RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180
           HLGCQLP HQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240
           YSEE                       YACRKTLADRRIRVRGRFARNNEAISDQEVNPT
Sbjct: 181 YSEE-----------------------YACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
           TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 264

[Close]

BLAST of MELO3C012623.jh1 vs. NCBI nr
Match: XP_011659034.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KAE8646103.1 hypothetical protein Csa_016552 [Cucumis sativus])

HSP 1 Score: 456 bits (1174), Expect = 3.28e-160
Identity = 245/286 (85.66%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETAD-NLVPLLEDDNFGALHRRR 60
           MASI PDQFY+DD YTS AAPPPT  SVG   WGD  ETAD NLVPLLEDDNFGALH   
Sbjct: 3   MASI-PDQFYHDDQYTSLAAPPPTTPSVGIG-WGD--ETADDNLVPLLEDDNFGALH--- 62

Query: 61  RHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPS-HSHQNNNNNARGSSCQDFNCH 120
             HQPYT H NQYY SS++ID ATWSFPQQDMLP FPS HSHQNN N ARGSSCQDFN H
Sbjct: 63  --HQPYT-HPNQYYCSSNVIDSATWSFPQQDMLPPFPSAHSHQNNKN-ARGSSCQDFNSH 122

Query: 121 LGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRY 180
           LGCQLP HQLF EF DDCFGLVPEIKPSFYNN PLPTHN DNQSNQVSVAEDSNMKVGRY
Sbjct: 123 LGCQLPDHQLFSEFHDDCFGLVPEIKPSFYNN-PLPTHNWDNQSNQVSVAEDSNMKVGRY 182

Query: 181 SEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTT 240
           SEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR NEAISDQE+NPT 
Sbjct: 183 SEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKNEAISDQELNPTI 242

Query: 241 MNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
            NNDTTIQKDTELLYNHHDFGVQMK DEEEWLQ+ISS+MYLPYISS
Sbjct: 243 KNNDTTIQKDTELLYNHHDFGVQMKGDEEEWLQDISSLMYLPYISS 276

[Close]

BLAST of MELO3C012623.jh1 vs. NCBI nr
Match: XP_038888885.1 (two-component response regulator-like APRR1 [Benincasa hispida])

HSP 1 Score: 327 bits (839), Expect = 3.02e-109
Identity = 204/305 (66.89%), Postives = 221/305 (72.46%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVG---GPFWGDHDETADNLVPLLEDDNFGALHR 60
           MASI   QFY D + +  AAPP TAASVG   GPFWG+ D+T  NLVPLL+D  FG LH 
Sbjct: 1   MASI--PQFYCDQYSSVVAAPPSTAASVGTGGGPFWGE-DQT--NLVPLLDD--FGLLH- 60

Query: 61  RRRHHQPYTDHHNQYYPSSDII-------DPATWSFPQQDMLPSFPS-----------HS 120
                    D   QY  +SD I       DPAT SF QQDML +FP            H 
Sbjct: 61  ---------DQPTQYSSNSDKIIIPALPIDPATTSFSQQDML-AFPQLNIIPSSMCGIHD 120

Query: 121 HQNNNNNARGSSCQDFNCHLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGD 180
           H   N  A     Q+F CHLGCQ P HQ FYEF DDCFGLVPEIKP ++   PLP HN +
Sbjct: 121 H---NAAAPAEGSQNF-CHLGCQ-PDHQ-FYEFSDDCFGLVPEIKPLYH---PLPPHNWE 180

Query: 181 NQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR 240
           NQSNQV VAEDSNMKVGRYSEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR
Sbjct: 181 NQSNQVPVAEDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR 240

Query: 241 GRFARNNEAISDQEVNPTTMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYL 284
           GRFARNNEA SDQE+NPTT N DT+I KDTELLYN+HDFGVQMKRDEEEWLQEI+S+M L
Sbjct: 241 GRFARNNEA-SDQEINPTTKN-DTSIHKDTELLYNNHDFGVQMKRDEEEWLQEITSLMCL 276

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 7.6e-06
Identity = 30/79 (37.97%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 153 LPTHNGDNQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLA 212
           +P  N +N  N+ ++   +     + S   R+ R+LRY +KR  R F KTI+YA RK  A
Sbjct: 255 VPDGNTNNSVNRSTITSSTTGGDHQASSMDREARVLRYREKRKNRKFEKTIRYASRKAYA 314

Query: 213 DRRIRVRGRFARNNEAISD 232
           + R R++GRFA+  E  +D
Sbjct: 315 ESRPRIKGRFAKRTETEND 333

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 183 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVN 236
           R+ R+LRY +K+  R F KTI+YA RK  A++R R++GRFA+  +   D+E N
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDV--DEEAN 336

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 183 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 229
           R+ R+LRY +KR  R F KTI+YA RK  A+ R R++GRFA+  ++
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDS 274

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-04
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 183 RKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEV 235
           R+ R++RY +KR  R F KTI+YA RK  A+ R R++GRFA+  +     +V
Sbjct: 295 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDV 346

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BG50 (uncharacterized protein LOC103489646 OS=Cucumis melo OX=3656 GN=LOC103489646 PE=4 SV=1)

HSP 1 Score: 591 bits (1524), Expect = 9.68e-214
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRR 60
           MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRR
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETADNLVPLLEDDNFGALHRRRR 60

Query: 61  HHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLG 120
           HHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLG
Sbjct: 61  HHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNCHLG 120

Query: 121 CQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSE 180
           CQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSE
Sbjct: 121 CQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSE 180

Query: 181 EVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMN 240
           EVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMN
Sbjct: 181 EVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMN 240

Query: 241 NDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
           NDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS
Sbjct: 241 NDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy TrEMBL
Match: A0A5A7U7B4 (Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00300 PE=4 SV=1)

HSP 1 Score: 582 bits (1500), Expect = 4.94e-210
Identity = 283/287 (98.61%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVG---GPFWGDHDETADNLVPLLEDDNFGALHR 60
           MASIIPDQFYYDDHYTSSAAPPPTAASVG   GPFWGDHDETADNLVPLLEDDNFGALHR
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120
           RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180
           HLGCQLP HQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240
           YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT
Sbjct: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
           TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 287

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BX03 (Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00030 PE=4 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 3.28e-189
Identity = 260/287 (90.59%), Postives = 260/287 (90.59%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVG---GPFWGDHDETADNLVPLLEDDNFGALHR 60
           MASIIPDQFYYDDHYTSSAAPPPTAASVG   GPFWGDHDETADNLVPLLEDDNFGALHR
Sbjct: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGIGGGPFWGDHDETADNLVPLLEDDNFGALHR 60

Query: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120
           RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC
Sbjct: 61  RRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPSHSHQNNNNNARGSSCQDFNC 120

Query: 121 HLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180
           HLGCQLP HQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR
Sbjct: 121 HLGCQLPDHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGR 180

Query: 181 YSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240
           YSEE                       YACRKTLADRRIRVRGRFARNNEAISDQEVNPT
Sbjct: 181 YSEE-----------------------YACRKTLADRRIRVRGRFARNNEAISDQEVNPT 240

Query: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
           TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS
Sbjct: 241 TMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 264

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy TrEMBL
Match: A0A0A0K3I7 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV=1)

HSP 1 Score: 456 bits (1174), Expect = 1.48e-160
Identity = 245/286 (85.66%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAAPPPTAASVGGPFWGDHDETAD-NLVPLLEDDNFGALHRRR 60
           MASI PDQFY+DD YTS AAPPPT  SVG   WGD  ETAD NLVPLLEDDNFGALH   
Sbjct: 1   MASI-PDQFYHDDQYTSLAAPPPTTPSVGIG-WGD--ETADDNLVPLLEDDNFGALH--- 60

Query: 61  RHHQPYTDHHNQYYPSSDIIDPATWSFPQQDMLPSFPS-HSHQNNNNNARGSSCQDFNCH 120
             HQPYT H NQYY SS++ID ATWSFPQQDMLP FPS HSHQNN N ARGSSCQDFN H
Sbjct: 61  --HQPYT-HPNQYYCSSNVIDSATWSFPQQDMLPPFPSAHSHQNNKN-ARGSSCQDFNSH 120

Query: 121 LGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRY 180
           LGCQLP HQLF EF DDCFGLVPEIKPSFYNN PLPTHN DNQSNQVSVAEDSNMKVGRY
Sbjct: 121 LGCQLPDHQLFSEFHDDCFGLVPEIKPSFYNN-PLPTHNWDNQSNQVSVAEDSNMKVGRY 180

Query: 181 SEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTT 240
           SEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFAR NEAISDQE+NPT 
Sbjct: 181 SEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARKNEAISDQELNPTI 240

Query: 241 MNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
            NNDTTIQKDTELLYNHHDFGVQMK DEEEWLQ+ISS+MYLPYISS
Sbjct: 241 KNNDTTIQKDTELLYNHHDFGVQMKGDEEEWLQDISSLMYLPYISS 274

[Close]

BLAST of MELO3C012623.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JLF7 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486274 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 3.55e-76
Identity = 159/296 (53.72%), Postives = 194/296 (65.54%), Query Frame = 0


Query: 1   MASIIPDQFYYDDHYTSSAA---------PPPTAASVGGP-FWGDHDETADNLVPLLEDD 60
           MASI   QF+Y D+  +++          PPPTA  +GG   WG+     + LVPL +D 
Sbjct: 1   MASI--PQFFYTDYTATTSLIPNDFCEQRPPPTAPPLGGGVLWGE-----ETLVPLFDD- 60

Query: 61  NFGALHRRRRHHQPYTDHHNQYYPSSDIIDPATWSFPQQDM--LPSFPSHSHQNNNNNAR 120
            FG       HHQP     +QY      + P   SFP QDM  LP   + S    NN A 
Sbjct: 61  -FGL------HHQPPISP-SQYSSHKPGLTPT--SFPHQDMIALPELNTPSMCATNNAA- 120

Query: 121 GSSCQDFNCHLGCQLPYHQLFYEFQDDCFGLVPEIKPSFYNNNPLPTHNGDNQSNQVSVA 180
              CQ+F C +G Q   H LF ++ DDCF LVPE +P ++   PLP  N + QSNQV V+
Sbjct: 121 --PCQNF-C-VGYQPDDHPLF-QYPDDCFRLVPETEPLYH---PLPPDNWEIQSNQVPVS 180

Query: 181 EDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 240
           EDSNMKVGRYSEEVRK+RILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA
Sbjct: 181 EDSNMKVGRYSEEVRKERILRYLKKRNQRNFNKTIKYACRKTLADRRIRVRGRFARNNEA 240

Query: 241 ISDQEVNPTTMNNDTTIQKDTELLYNHHDFGVQMKRDEEEWLQEISSIMYLPYISS 284
             DQ++NPT +N+ +  + DT+LLYN    G Q K+DEEEW++E++ +MYLPYISS
Sbjct: 241 C-DQQLNPTKINHTSIHKVDTQLLYNQDHVGAQRKKDEEEWVEEMTGLMYLPYISS 268

[Close]

BLAST of MELO3C012623.jh1 vs. TAIR 10
Match: AT3G12890.1 (activator of spomin::LUC2 )

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-25
Identity = 68/140 (48.57%), Postives = 87/140 (62.14%), Query Frame = 0


Query: 137 FGLVPEIKPSFYNNNPLPTHNGDNQSN-QVSVAEDSNMKVGRYSEEVRKQRILRYLKKRN 196
           +G  PEIKP F      P     +  N +  +  + N KVGRYS E RK RI+RYLKK+N
Sbjct: 97  YGFSPEIKPLF-----RPATGEQSWGNSEGGIQAEPNTKVGRYSVEERKDRIMRYLKKKN 156

Query: 197 QRNFNKTIKYACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMNNDTTIQKDTELLYNH 256
           QRNFNKTIKY CRKTLADRR+RVRGRFARNN+   +Q       NN +  +K+ ++    
Sbjct: 157 QRNFNKTIKYVCRKTLADRRVRVRGRFARNNDTCEEQPHMSKNHNNHS--EKEEDMFSGS 216

Query: 257 HDFGVQMKRDEEEWLQEISS 276
            D+ +QM+ D + WL E  S
Sbjct: 217 DDYLIQMEHD-DGWLHEAMS 228

[Close]

BLAST of MELO3C012623.jh1 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-17
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 0


Query: 160 NQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRIRVR 219
           ++++ +  +E+ N KVGRYS E RK++I +Y  KRNQRNF KTIKYACRKTLAD R R+R
Sbjct: 192 SENSTMPFSEEQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIR 251

Query: 220 GRFARNNEAI 230
           GRFARN+E +
Sbjct: 252 GRFARNDEVV 261

[Close]

BLAST of MELO3C012623.jh1 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-16
Identity = 65/147 (44.22%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 102 NNNNNARGSSCQDFNCHLGCQL-PYHQLFYEFQDDCFGLV--PEIKPSFYNNNPLPTH-- 161
           N  N   GS     N HLG    P H    E Q D  GL     IKP F   NP   H  
Sbjct: 189 NMMNTGLGSGFYSGNIHLGSDFKPSHDQLMEIQADNGGLFCPDPIKPIF---NPGDHHLQ 248

Query: 162 ---NGDNQSNQVS-------------VAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFN 221
                +NQ++ V+             + + S  KVG+ S E RK++I RY+KKRN+RNF+
Sbjct: 249 GLDGVENQNHMVAQPVLPQLGTEITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFS 308

Query: 222 KTIKYACRKTLADRRIRVRGRFARNNE 228
           K IKYACRKTLAD R RVRGRFA+N+E
Sbjct: 309 KKIKYACRKTLADSRPRVRGRFAKNDE 332

[Close]

BLAST of MELO3C012623.jh1 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 82.4 bits (202), Expect = 6.4e-16
Identity = 57/131 (43.51%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 116 NCHLGCQL-PYHQLFYEFQDDCFG-LVPEIKPSFYNNNPLPTHNGDNQSNQ--------- 175
           N H+G ++   H    +FQ D  G   P+     +N   L    G    NQ         
Sbjct: 225 NIHVGSEINKPHDPLMDFQADNGGFFCPDSIKRMFNPEDLQKALGGGAENQSHLVTPQAH 284

Query: 176 -------VSVAEDSNM-KVGRYSEEVRKQRILRYLKKRNQRNFNKTIKYACRKTLADRRI 228
                  ++  EDS + KVG+ S E RK++I RY+KKRN+RNFNK IKYACRKTLAD R 
Sbjct: 285 PALGPVDINGLEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRP 344

[Close]

BLAST of MELO3C012623.jh1 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-15
Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 0


Query: 145 PSFYNNNPLPTHNGDNQSNQVSVAEDSNMKVGRYSEEVRKQRILRYLKKRNQRNFNKTIK 204
           P    ++P    +GD QS          ++VGRYS E RK++I +Y  KR QRNF KTIK
Sbjct: 164 PLAAESSPTTVFSGDEQS----------LRVGRYSSEERKEKISKYRAKRTQRNFTKTIK 223

Query: 205 YACRKTLADRRIRVRGRFARNNEAISDQEVNPTTMNNDTTIQKDTEL 252
           YACRKTLAD R RVRGRFARN+E       NP   ++ T  + D +L
Sbjct: 224 YACRKTLADNRPRVRGRFARNDEVFE----NPKIASSFTRQENDDDL 256

The following BLAST results are available for this feature:

BLAST of MELO3C012623.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447123.1	2.00e-213	100.00	PREDICTED: uncharacterized protein LOC103489646 [Cucumis melo]	[more]
KAA0051090.1	1.02e-209	98.61	zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa]	[more]
TYK02679.1	6.77e-189	90.59	zinc finger protein CONSTANS-LIKE 5 [Cucumis melo var. makuwa]	[more]
XP_011659034.1	3.28e-160	85.66	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KAE8646103.1 hypothetical...	[more]
XP_038888885.1	3.02e-109	66.89	two-component response regulator-like APRR1 [Benincasa hispida]	[more]

BLAST of MELO3C012623.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHH8	7.6e-06	37.97	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
O50055	8.4e-05	47.17	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9SK53	2.4e-04	50.00	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q940T9	2.4e-04	44.23	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]

BLAST of MELO3C012623.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BG50	9.68e-214	100.00	uncharacterized protein LOC103489646 OS=Cucumis melo OX=3656 GN=LOC103489646 PE=...	[more]
A0A5A7U7B4	4.94e-210	98.61	Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BX03	3.28e-189	90.59	Zinc finger protein CONSTANS-LIKE 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0K3I7	1.48e-160	85.66	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G237850 PE=4 SV...	[more]
A0A6J1JLF7	3.55e-76	53.72	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of MELO3C012623.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12890.1	2.6e-25	48.57	activator of spomin::LUC2	[more]
AT5G41380.1	2.0e-17	61.43	CCT motif family protein	[more]
AT1G04500.1	1.3e-16	44.22	CCT motif family protein	[more]
AT2G33350.1	6.4e-16	43.51	CCT motif family protein	[more]
AT1G63820.1	1.1e-15	47.66	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 183..225 e-value: 3.1E-16 score: 59.2
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 183..225 score: 14.802668
None	No IPR available	PANTHER	PTHR31717:SF56	ACTIVATOR OF SPOMIN::LUC2	coord: 1..284
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012623.jh1.t1	MELO3C012623.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding