MELO3C012512.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C012512.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	protein RADIALIS-like 1
Location	chr01: 18070009 .. 18070810 (+)
RNA-Seq Expression	MELO3C012512.jh1
Synteny	MELO3C012512.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATGTCCTCACATGGCTCAAATGCATGGACTAAAATGCAAAACAAGACGTTTGAAAAGGCTTTGGCTGAGTATGATCAAGACACTCCTGAAAGATGGGTGAATGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGAGGCATTACCAACTTCTCCTTCATGATGTCAAACATATCGAGTCTGGCAATGTCCCTTTTCCCTATCCAACAACCTCGAGCGATGATGATTTGCCGAGGAAAAGAGGTGTCATTTGAATTTCATCCTATTTGATATGATGTTTCTCGTTTCTGGTTTTCAATCTCTCTATGAAACAAACTTTGTACCTGCTCTTGGTTTCTTGTGGTTTCTTGTTTTCCATTATTCAAAAATTACGTGTTTTCAAAATTGTGAAGAAGGTTTATGGCAACAATAAAATCCAAAGTTTTTTGTTTTCCGATGTCTTTATCTCGTTTGTTATATTATTTTTTCTTTACTTTTAAATTGCATAAGAAACTGTTCATTTTAAATTTTATATACCAAGTCCTCCTTTGATTATATTATTTATTCTTCTTCTTTTTTTGTTTTTTCTTCTCAGGATGAGTAAGAACAAGGCCTTCATTGATCGAGCTAGTGCAATACTTTGAAGAATATAAAAGAAGAACGAACCATCCCTTTAAATGCAGTTTTACTAATGATGAAAGAATAAATAAGAGTTTAATTATTTGAAATTTTGTTCCTCTCTGAGAGTATGAGAGTTCTTGTTATATGGTACGACATTCATATCTATAAGGAATGTTTAATTTAATA

mRNA sequence

ATGGCTTCAATGTCCTCACATGGCTCAAATGCATGGACTAAAATGCAAAACAAGACGTTTGAAAAGGCTTTGGCTGAGTATGATCAAGACACTCCTGAAAGATGGGTGAATGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGAGGCATTACCAACTTCTCCTTCATGATGTCAAACATATCGAGTCTGGCAATGTCCCTTTTCCCTATCCAACAACCTCGAGCGATGATGATTTGCCGAGGAAAAGAGGTGTCGATGAGTAAGAACAAGGCCTTCATTGATCGAGCTAGTGCAATACTTTGAAGAATATAAAAGAAGAACGAACCATCCCTTTAAATGCAGTTTTACTAATGATGAAAGAATAAATAAGAGTTTAATTATTTGAAATTTTGTTCCTCTCTGAGAGTATGAGAGTTCTTGTTATATGGTACGACATTCATATCTATAAGGAATGTTTAATTTAATA

Coding sequence (CDS)

ATGGCTTCAATGTCCTCACATGGCTCAAATGCATGGACTAAAATGCAAAACAAGACGTTTGAAAAGGCTTTGGCTGAGTATGATCAAGACACTCCTGAAAGATGGGTGAATGTTGCTAAGGCTGTTGGTGAAAAAACTGAAGAGGAAGTCAAGAGGCATTACCAACTTCTCCTTCATGATGTCAAACATATCGAGTCTGGCAATGTCCCTTTTCCCTATCCAACAACCTCGAGCGATGATGATTTGCCGAGGAAAAGAGGTGTCGATGAGTAA

Protein sequence

MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHDVKHIESGNVPFPYPTTSSDDDLPRKRGVDE

Homology

[Close]

BLAST of MELO3C012512.jh1 vs. NCBI nr
Match: XP_008447294.1 (PREDICTED: protein RADIALIS-like 2 [Cucumis melo])

HSP 1 Score: 182 bits (461), Expect = 1.00e-57
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88
          VKHIESGNVPFPYPTTSSDDDLPRKRGV
Sbjct: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88

[Close]

BLAST of MELO3C012512.jh1 vs. NCBI nr
Match: KAA0036174.1 (protein RADIALIS-like 2 [Cucumis melo var. makuwa] >TYK19719.1 protein RADIALIS-like 2 [Cucumis melo var. makuwa])

HSP 1 Score: 182 bits (461), Expect = 1.00e-57
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88
          VKHIESGNVPFPYPTTSSDDDLPRKRGV
Sbjct: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88

[Close]

BLAST of MELO3C012512.jh1 vs. NCBI nr
Match: XP_011659078.1 (protein RADIALIS-like 2 [Cucumis sativus] >KAE8646141.1 hypothetical protein Csa_015657 [Cucumis sativus])

HSP 1 Score: 173 bits (439), Expect = 2.14e-54
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSSHGSNAWTKMQNKTFE ALAEYDQDTPERWVNVAKAVGEKTEEEVK HYQLLLHD
Sbjct: 1  MASMSSHGSNAWTKMQNKTFEMALAEYDQDTPERWVNVAKAVGEKTEEEVKMHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRG 87
          VKHIESGNVPFPYPTTSS+DDLPRKRG
Sbjct: 61 VKHIESGNVPFPYPTTSSNDDLPRKRG 87

[Close]

BLAST of MELO3C012512.jh1 vs. NCBI nr
Match: XP_038888638.1 (protein RADIALIS-like 1 [Benincasa hispida])

HSP 1 Score: 159 bits (402), Expect = 8.93e-49
Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSSHGSNAWT MQNKTFEKALA YDQDTPERW+NVAKAVGEKTEEEVKRHYQLLL D
Sbjct: 1  MASMSSHGSNAWTAMQNKTFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLDD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRG 87
          VKHIESGNVPFPYP  SS DDLPRKRG
Sbjct: 61 VKHIESGNVPFPYP--SSSDDLPRKRG 85

[Close]

BLAST of MELO3C012512.jh1 vs. NCBI nr
Match: XP_022952273.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG7011709.1 Protein RADIALIS-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 153 bits (387), Expect = 1.73e-46
Identity = 77/87 (88.51%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSS GSNAWT MQNK FEKALA YDQDTPERW+NVAKAVGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRG 87
          VKHIESGNVPFPY  +S  DDLPRKRG
Sbjct: 61 VKHIESGNVPFPYRNSS--DDLPRKRG 85

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.0e-22
Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 3  SMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHDVK 62
          SMSS+GS +WT  QNK FE+ALA YDQDTP+RW NVA+AVG KT EE KR Y LL+ D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGNVPFP-YPTTSSDDDLPRKR 87
           IE+G+VPFP Y TT+ + +  R R
Sbjct: 65 SIENGHVPFPDYKTTTGNSNRGRLR 89

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 2  ASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHDV 61
          +SMSS  S +WT  QNK FE+ALA YDQDTP RW NVAK VG KT EEVKRHY+LL+ D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGNVPFPYPTTS 78
            IE+G+VPFP   TS
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-19
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MAS S   S++WT  QNK FE+ALA YD+DTP+RW NVAKAVG K+ EEVKRHY +L+ D
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGNVPFP-YPTTSSDDDLPRKRGVDE 91
          + +IE   VP P Y T    D   + RG+D+
Sbjct: 61 LMNIEQDLVPLPKYKTV---DVGSKSRGIDD 88

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.2e-19
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MAS S   S +WT+ +NK FE+ALA YDQDTP+RW NVA+AVG K+ EEV+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKHIESGNVPFP 73
          V  IESG  P P
Sbjct: 61 VNDIESGRYPHP 72

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-18
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MAS    G   W+  +NK FE+ALA YD+DTP+RW NVA+AV  +T EEVK+HY++L+ D
Sbjct: 1  MASTRGSG-RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 60

Query: 61 VKHIESGNVPFP-YPTTSSDDDLPRKR 87
          +K+IESG VPFP Y TT  +     KR
Sbjct: 61 IKYIESGKVPFPNYRTTGGNMKTDEKR 86

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D8F6 (Protein RADIALIS-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold214G00200 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 4.84e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88
          VKHIESGNVPFPYPTTSSDDDLPRKRGV
Sbjct: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BHZ4 (protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103489762 PE=4 SV=1)

HSP 1 Score: 182 bits (461), Expect = 4.84e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88
          VKHIESGNVPFPYPTTSSDDDLPRKRGV
Sbjct: 61 VKHIESGNVPFPYPTTSSDDDLPRKRGV 88

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GK35 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 8.40e-47
Identity = 77/87 (88.51%), Postives = 79/87 (90.80%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSS GSNAWT MQNK FEKALA YDQDTPERW+NVAKAVGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRG 87
          VKHIESGNVPFPY  +S  DDLPRKRG
Sbjct: 61 VKHIESGNVPFPYRNSS--DDLPRKRG 85

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I517 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471073 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 3.42e-46
Identity = 76/87 (87.36%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSS GSNAWT MQNK FEKALA YDQDTPERW+NVAK VGEKTEEEVKRHYQLLLHD
Sbjct: 1  MASMSSRGSNAWTPMQNKAFEKALAVYDQDTPERWLNVAKVVGEKTEEEVKRHYQLLLHD 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRG 87
          VKHIESGNVPFPY  +S  DDLPRKRG
Sbjct: 61 VKHIESGNVPFPYRNSS--DDLPRKRG 85

[Close]

BLAST of MELO3C012512.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C6U4 (protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007913 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 2.79e-43
Identity = 72/87 (82.76%), Postives = 78/87 (89.66%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MASMSS GS+AWT MQNK FE+ALA YDQDTPERW+NVAKAVGEKTEEEVKRHYQLL+ D
Sbjct: 1  MASMSSRGSSAWTAMQNKAFEEALAVYDQDTPERWLNVAKAVGEKTEEEVKRHYQLLVED 60

Query: 61 VKHIESGNVPFPYPTTSSDDDLPRKRG 87
          VKHIESG+VPFPY T S+DDD P KRG
Sbjct: 61 VKHIESGHVPFPYQT-SNDDDFPTKRG 86

[Close]

BLAST of MELO3C012512.jh1 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 5.0e-23
Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 0


Query: 3  SMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHDVK 62
          SMSS+GS +WT  QNK FE+ALA YDQDTP+RW NVA+AVG KT EE KR Y LL+ D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGNVPFP-YPTTSSDDDLPRKR 87
           IE+G+VPFP Y TT+ + +  R R
Sbjct: 65 SIENGHVPFPDYKTTTGNSNRGRLR 89

[Close]

BLAST of MELO3C012512.jh1 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 103.6 bits (257), Expect = 8.5e-23
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 2  ASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHDV 61
          +SMSS  S +WT  QNK FE+ALA YDQDTP RW NVAK VG KT EEVKRHY+LL+ D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGNVPFPYPTTS 78
            IE+G+VPFP   TS
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of MELO3C012512.jh1 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-20
Identity = 50/91 (54.95%), Postives = 63/91 (69.23%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MAS S   S++WT  QNK FE+ALA YD+DTP+RW NVAKAVG K+ EEVKRHY +L+ D
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGNVPFP-YPTTSSDDDLPRKRGVDE 91
          + +IE   VP P Y T    D   + RG+D+
Sbjct: 61 LMNIEQDLVPLPKYKTV---DVGSKSRGIDD 88

[Close]

BLAST of MELO3C012512.jh1 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-19
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MAS S    + WT  QNK FE+ALA YD+DTP+RW NVAKAVG KT EEVKRHY +L+ D
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGNVPFP-YPTTSSD 80
          + +IE+G VP P Y T  S+
Sbjct: 61 LINIETGRVPLPNYKTFESN 80

[Close]

BLAST of MELO3C012512.jh1 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 91.7 bits (226), Expect = 3.3e-19
Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 1  MASMSSHGSNAWTKMQNKTFEKALAEYDQDTPERWVNVAKAVGEKTEEEVKRHYQLLLHD 60
          MAS S    + WT  QNK FE+ALA YD+DTP+RW NVAKAVG KT EEVKRHY +L+ D
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGNVPFP-YPTTSSD 80
          + +IE+G VP P Y T  S+
Sbjct: 61 LINIETGRVPLPNYKTFESN 80

The following BLAST results are available for this feature:

BLAST of MELO3C012512.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447294.1	1.00e-57	100.00	PREDICTED: protein RADIALIS-like 2 [Cucumis melo]	[more]
KAA0036174.1	1.00e-57	100.00	protein RADIALIS-like 2 [Cucumis melo var. makuwa] >TYK19719.1 protein RADIALIS-...	[more]
XP_011659078.1	2.14e-54	96.55	protein RADIALIS-like 2 [Cucumis sativus] >KAE8646141.1 hypothetical protein Csa...	[more]
XP_038888638.1	8.93e-49	91.95	protein RADIALIS-like 1 [Benincasa hispida]	[more]
XP_022952273.1	1.73e-46	88.51	protein RADIALIS-like 1 [Cucurbita moschata] >XP_023511439.1 protein RADIALIS-li...	[more]

BLAST of MELO3C012512.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIJ5	7.0e-22	61.18	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
F4JVB8	1.2e-21	65.79	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q8GW75	5.5e-19	54.95	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]
Q6NNN0	7.2e-19	62.50	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q58FS3	2.1e-18	54.02	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]

BLAST of MELO3C012512.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D8F6	4.84e-58	100.00	Protein RADIALIS-like 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHZ4	4.84e-58	100.00	protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103489762 PE=4 SV=1	[more]
A0A6J1GK35	8.40e-47	88.51	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111455002 PE=4 SV=1	[more]
A0A6J1I517	3.42e-46	87.36	protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471073 PE=4 SV=1	[more]
A0A6J1C6U4	2.79e-43	82.76	protein RADIALIS-like 1 OS=Momordica charantia OX=3673 GN=LOC111007913 PE=4 SV=1	[more]

BLAST of MELO3C012512.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21650.1	5.0e-23	61.18	Homeodomain-like superfamily protein	[more]
AT4G39250.1	8.5e-23	65.79	RAD-like 1	[more]
AT1G19510.1	3.9e-20	54.95	RAD-like 5	[more]
AT1G75250.1	3.3e-19	60.00	RAD-like 6	[more]
AT1G75250.2	3.3e-19	60.00	RAD-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 2.5E-8 score: 43.7
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..58 score: 6.39984
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 11..58 e-value: 4.25099E-7 score: 40.6366
None	No IPR available	GENE3D	1.10.10.60		coord: 3..71 e-value: 4.8E-22 score: 79.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..90
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 2..80
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 10..58 e-value: 1.5E-6 score: 28.3
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..80
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012512.jh1.t1	MELO3C012512.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity