MELO3C012239.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCGTCTATCCGTTGAAACTTAAAACAAACTCATTACAAAATAAAAGATAAAGAAAAAAAGAGAAAGAAACCCTAATTCTTTTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTGATGGAGAATCCAAATTCCAAGAAGCGGGATCGGGACGACTCGGCCGAGTCAGAAACCGGTTCGCCCGAGGTGAAGCGGCTCAGAGACGACCTTCTAGGTTTCTTCGACGAATCCGATCCTGAACCAGCCACTCAGGATCTCGATTCCTTGATGAGAAGCTTCGAGGAAGAAATCGCTACCGCATCGTCTTCTCCGGTGCCGGTGGTTGATTTGACGGCGGATTCCGGTGAGTCTCAACCGGAGTTAGGTTACCTCTTGGAAGCCTCCGACGATGAGCTCGGTCTGCCGCCTTCCAATAGCCAAGAGGAATTTGCTCGAATATCGACTGATTCGTCTGACATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCTTTCGAACTCGAAGGCGGAGATGTATACAGTGGCAGTGATACGGCGGAGTATGTGGCGTTCGATGGGCTGTTGGAGTATTCGAATCTGTGCTTTGATTTGTCGGATAACTCCGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAGGTAGAAACGTCGATCTGTAAATGTTTTTGGTTTAGATTTGTTGGTGCGTAGGACTAGATTGATACAGATGATGCTGATGAATATAGGAATTGGTTCGTTTTTTCTTTCTTTCAAGTTCGAATACACATGATTTCATATAGTGGAATTCTAATCTTTCTTTCTTTTCCGTTCTTGTTTATGTCTTGTGGTTTGTGTGTGAATTCTTGAAAATGATTTTGCGTTGCCCTA ATCGCGTCTATCCGTTGAAACTTAAAACAAACTCATTACAAAATAAAAGATAAAGAAAAAAAGAGAAAGAAACCCTAATTCTTTTCTCTCTCTCTCTCCTTTTTTTTTTTTTTTGATGGAGAATCCAAATTCCAAGAAGCGGGATCGGGACGACTCGGCCGAGTCAGAAACCGGTTCGCCCGAGGTGAAGCGGCTCAGAGACGACCTTCTAGGTTTCTTCGACGAATCCGATCCTGAACCAGCCACTCAGGATCTCGATTCCTTGATGAGAAGCTTCGAGGAAGAAATCGCTACCGCATCGTCTTCTCCGGTGCCGGTGGTTGATTTGACGGCGGATTCCGGTGAGTCTCAACCGGAGTTAGGTTACCTCTTGGAAGCCTCCGACGATGAGCTCGGTCTGCCGCCTTCCAATAGCCAAGAGGAATTTGCTCGAATATCGACTGATTCGTCTGACATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCTTTCGAACTCGAAGGCGGAGATGTATACAGTGGCAGTGATACGGCGGAGTATGTGGCGTTCGATGGGCTGTTGGAGTATTCGAATCTGTGCTTTGATTTGTCGGATAACTCCGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAGGTAGAAACGTCGATCTGTAAATGTTTTTGGTTTAGATTTGTTGGTGCGTAGGACTAGATTGATACAGATGATGCTGATGAATATAGGAATTGGTTCGTTTTTTCTTTCTTTCAAGTTCGAATACACATGATTTCATATAGTGGAATTCTAATCTTTCTTTCTTTTCCGTTCTTGTTTATGTCTTGTGGTTTGTGTGTGAATTCTTGAAAATGATTTTGCGTTGCCCTA ATGGAGAATCCAAATTCCAAGAAGCGGGATCGGGACGACTCGGCCGAGTCAGAAACCGGTTCGCCCGAGGTGAAGCGGCTCAGAGACGACCTTCTAGGTTTCTTCGACGAATCCGATCCTGAACCAGCCACTCAGGATCTCGATTCCTTGATGAGAAGCTTCGAGGAAGAAATCGCTACCGCATCGTCTTCTCCGGTGCCGGTGGTTGATTTGACGGCGGATTCCGGTGAGTCTCAACCGGAGTTAGGTTACCTCTTGGAAGCCTCCGACGATGAGCTCGGTCTGCCGCCTTCCAATAGCCAAGAGGAATTTGCTCGAATATCGACTGATTCGTCTGACATCGGTGAGATGTGGAGGTTTGAGGATCAGATCCCGAACTACGACGCTTTCGAACTCGAAGGCGGAGATGTATACAGTGGCAGTGATACGGCGGAGTATGTGGCGTTCGATGGGCTGTTGGAGTATTCGAATCTGTGCTTTGATTTGTCGGATAACTCCGATTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAGTAG MENPNSKKRDRDDSAESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPPSNSQEEFARISTDSSDIGEMWRFEDQIPNYDAFELEGGDVYSGSDTAEYVAFDGLLEYSNLCFDLSDNSDFLWRQESLPAQ Homology
BLAST of MELO3C012239.jh1 vs. NCBI nr
Match: XP_008446589.1 (PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo] >KAA0034548.1 uncharacterized protein E6C27_scaffold65G005630 [Cucumis melo var. makuwa] >TYK09102.1 uncharacterized protein E5676_scaffold475G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 346 bits (888), Expect = 5.38e-120 Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. NCBI nr
Match: XP_004135103.1 (uncharacterized protein LOC101221594 [Cucumis sativus] >KGN52073.1 hypothetical protein Csa_007819 [Cucumis sativus]) HSP 1 Score: 335 bits (859), Expect = 1.42e-115 Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. NCBI nr
Match: XP_038891554.1 (uncharacterized protein LOC120080940 [Benincasa hispida]) HSP 1 Score: 334 bits (857), Expect = 2.87e-115 Identity = 168/178 (94.38%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. NCBI nr
Match: KAG7013029.1 (hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 306 bits (783), Expect = 8.31e-104 Identity = 163/190 (85.79%), Postives = 169/190 (88.95%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. NCBI nr
Match: KAG6573972.1 (hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305 bits (781), Expect = 1.68e-103 Identity = 163/190 (85.79%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SV83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00920 PE=4 SV=1) HSP 1 Score: 346 bits (888), Expect = 2.61e-120 Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BEX2 (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1) HSP 1 Score: 346 bits (888), Expect = 2.61e-120 Identity = 176/178 (98.88%), Postives = 176/178 (98.88%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KR57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608610 PE=4 SV=1) HSP 1 Score: 335 bits (859), Expect = 6.89e-116 Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HYB6 (uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 6.66e-103 Identity = 161/190 (84.74%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. ExPASy TrEMBL
Match: A0A6J1G1T4 (uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC111449910 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 6.66e-103 Identity = 162/190 (85.26%), Postives = 168/190 (88.42%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36 Identity = 89/188 (47.34%), Postives = 118/188 (62.77%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29 Identity = 76/169 (44.97%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 125.2 bits (313), Expect = 5.4e-29 Identity = 75/166 (45.18%), Postives = 102/166 (61.45%), Query Frame = 0
BLAST of MELO3C012239.jh1 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24 Identity = 78/184 (42.39%), Postives = 102/184 (55.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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