MELO3C012131.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C012131.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Eukaryotic translation initiation factor 5A
Location	chr10: 2484046 .. 2487033 (+)
RNA-Seq Expression	MELO3C012131.jh1
Synteny	MELO3C012131.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGTTGGGCATGGCCATTGAATTATAAAGATGACTCTTGACCAAAATTTAAATCTAGATAGATTAGATTTGGGGAGTGAAATAGCATTTGGATTTTCTACTGATGAGACTACCTTCTCAATTGTTCTCACCATCCTTGAGAGCGAGTGATTTATATTGTTGACCGATGGCATTCCAGTTGTGGGCTGTGCGGCCAGTAAATCCAAGCCCAAGCCCAAAGCTCATAAAGAAAGAAGCAAAATTTGGCAGATTCTTTATCAACGAAACAGGAGGACAAAAAAAAAATAAAAAAAAATAAAAAACGGGAATTGAACCCGACGTGAATCGAACACGCAACCTTCTGATCTGGAGTCAGACGCGCTACCATTGCGCCACGGATCCGCGGATGAAAGGTACCCTTTGAAACAAACTTATATTGATTGATATAAGTTTCTTTTTACATATGGTTGTTATCGAGTTATTCTACGTACTAAAGTCGAAAGAATTATGGACGCCATATAGAATAATCTTTAAGATCTTATTAGAATAGATTTAGAAGATAAAATTGAAAATAAATGTATCGAGTTATTCTACGTACTATTCAGTCTACAATGTTGCCTGTGCGAAGGCCCAATATAAAGCCAGTGACGAAGTTGAAGCAGTAAAATTTACAAGACTGCTTTCTGGCTTCCTTCGATCTACATGTCCTCAGTGTTTGCTCCACCAAAAATTACCAAACGTGAGGCTTAAAATCTTGAGCAGATTAAAATAAGTTATGTTCTTTACTACTCCTTAAAGCATATATTTATAGTGTTTTAAGGTGGTGTTGGAATCTTTCAACTAGGATGGAAGTGTTAGATGTCGATTGAATTACAAAATATATTTTGCTTCATTCATTCTTCCAATTGTTAAAATAGTGTATGTATTTTTTTATCAAATAATGGTAAAACGTTATTATAATATTATTGAAATGTAAAATCAGATATTTGCCAAATCAACGTCGACCGTTCTCTATAATCGTACGGTTAGTATATTTACAACAGAACGTTTTATTTATTTTCGATTTTCTTTCTTGAAACCCTAGGTTCACACTTCCCTTTTTTGGTTACCTTTGTTCTTCGTTTTTCTCGTATATATAAATTCGCTTCTTTTCTCCAACCCGCTCCGTCGCACGTCCTTACTTTTACGAATCACCCTCTCTTTGAACTTTTTTCCCAACAGAGCCATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAAAATGGATACATTGTCATCAAGGGCAGACCTTGCAAGGTTCTAATCGTTTTCATTCTGATTTCTCAATTCTCACTCATCTGTTTGTCCATTTATTCGCATAAGTTTTGTTTAACATGATATACGCTTTCAATACTCTGCTCCAATTTTTCCTCTTCTTTTTGCGTTGGGTATATAGCTTTTTCAAGGGCTTTCCTTTTTACCCCATACTGTTCTCTTGTTTGTCTTAATTGTGTTTCTGTACTTTTTGGGACGGACTTTTTTCACTTTTCTGCCTTTATTTATTTTTGTCATCTGATTTTACTTCTAGTTGTAGTCGTCTGTGTAATTTAGTTTTCTTGATTAAATTTCTTTCTGTGAAATTGAATTGATGGATAATCTAGTAAGCGGAAGTGGAAGTAATGAATTGATTGAAGCTGAATCATATTTCATTCTGTTGCTTTCTAGGGTTGTCACCTTTGGTGGTTTCAGCATAATTTTATTTACTTTATCTTTTGGTTTCTCAATTAACTATCTTGACTTAAGGCTTATGCATTACGGTTTATAACTTTGTAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAATTGTGATGTATAAATTATTTTCTCCCCTTCGATTTCACATTTTCCTTAGCAAGTTTTAGGTTTGTTTGTGATTTCTGATTCTTGCATCCATGAAACACAGGTTCCACATGTCAGTCGTACTGACTACCAGCTCATTGATATCTCCGAGGATGGATTTGTATGATCAAATTTTATTTCCTTACTTTTTATATCAGTTTCCCTTGGGTATTCATGTATAGCACTGTGGCTAACCCCAATTTCAATTAAAACTTATCAGATTAGCCTGCTGACAGACAGTGGTAGCACCAAGGATGACCTTAGGCTTCCAACCGATGATAATCTGCTGTCCCAGGTAACATTTTCTCATTGGATGTTGATATTTATCTGTGCTGTTGTGTTCTATTGACCTTGAAAATGAAACAATTTTTTTCTCCACTCGTACTGATTCTGGGATTATTAAGATTTCGGACTAAGTCAATACCGATTCTGCGATTATTAGGATTTAGGACTAGGAGTGTGATGGATTCTGTTCTTTTTATAATTTCCTCATTCCTCTATTATGCGTATGTTTTCAACAAATATGGGCTTGAATTTCTTACAAAATGAGGAGATGCGGTTAATTTAAGTACCAGGGTGTACTGTTGAAGATGGGTTTGAATGATGGTGTTTTTAGGATCATGAAATGCTGAAACGGCAAAAATAGACTTATTTATGGTTAATGAACAAGCACTTAATATTTGGATAGTATTGATAGAAAAGGATCACATGATGATACTCTAAATTTTTCTATGAATGGAAAATAAAATTTTAGCAGTTTTCTTTTCTTGTGCACAAGACTAATCTCTAGGCCTCGGTAATCTATAAAATCTATTTCTTGCGAGGTTATGGCTATGGGTAGGTGTAGTTCCTGAGATTGATGGTCTTGTTCCATGTGTTCCATGCAGATCAAGGATGGATTTGCCGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATAGGCCCAAAATAG

mRNA sequence

ATGTCAGACGCGCTACCATTGCGCCACGGATCCGCGGATGAAAGAGCCATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAAAATGGATACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAATTGTGATGTTCCACATGTCAGTCGTACTGACTACCAGCTCATTGATATCTCCGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAGCACCAAGGATGACCTTAGGCTTCCAACCGATGATAATCTGCTGTCCCAGATCAAGGATGGATTTGCCGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATAGGCCCAAAATAG

Coding sequence (CDS)

ATGTCAGACGCGCTACCATTGCGCCACGGATCCGCGGATGAAAGAGCCATGTCGGACGAGGAGCACCACTTCGAGTCCAAGGCCGACGCCGGAGCTTCCAAGACTTATCCCCAGCAGGCTGGAACCATCCGCAAAAATGGATACATTGTCATCAAGGGCAGACCTTGCAAGGTTGTTGAGGTTTCAACCTCAAAGACTGGAAAGCACGGACATGCTAAATGTCACTTTGTTGGCATTGACATTTTCACTGCTAAAAAGCTTGAAGATATCGTCCCCTCTTCACACAATTGTGATGTTCCACATGTCAGTCGTACTGACTACCAGCTCATTGATATCTCCGAGGATGGATTTATTAGCCTGCTGACAGACAGTGGTAGCACCAAGGATGACCTTAGGCTTCCAACCGATGATAATCTGCTGTCCCAGATCAAGGATGGATTTGCCGAGGGGAAGGATCTGATTGTGACTGTCATGTCTTCAATGGGAGAGGAGCAAATCTGCGCTCTCAAGGACATAGGCCCAAAATAG

Protein sequence

MSDALPLRHGSADERAMSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTDDNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK

Homology

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BLAST of MELO3C012131.jh1 vs. NCBI nr
Match: XP_008446407.1 (PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034452.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa] >TYK17682.1 eukaryotic translation initiation factor 5A-2 [Cucumis melo var. makuwa])

HSP 1 Score: 322 bits (824), Expect = 1.41e-110
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. NCBI nr
Match: XP_038893432.1 (eukaryotic translation initiation factor 5A-4 [Benincasa hispida])

HSP 1 Score: 317 bits (812), Expect = 9.52e-109
Identity = 156/159 (98.11%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           ++LLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. NCBI nr
Match: XP_004135157.1 (eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypothetical protein Csa_009020 [Cucumis sativus])

HSP 1 Score: 315 bits (807), Expect = 5.51e-108
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. NCBI nr
Match: XP_022151244.1 (eukaryotic translation initiation factor 5A-4-like [Momordica charantia])

HSP 1 Score: 314 bits (805), Expect = 1.11e-107
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTTKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           ++LLSQIKDGF EGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFNEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. NCBI nr
Match: XP_020549090.1 (eukaryotic translation initiation factor 5A-3 [Sesamum indicum])

HSP 1 Score: 313 bits (802), Expect = 3.19e-107
Identity = 151/159 (94.97%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           +NLLSQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy Swiss-Prot
Match: P24922 (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=4092 GN=EIF-5A2 PE=2 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-82
Identity = 146/159 (91.82%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEH FESKADAGASKTYPQQAGTIRKNG+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           DNLL+QIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy Swiss-Prot
Match: Q9AXJ4 (Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV=2)

HSP 1 Score: 303.9 bits (777), Expect = 1.2e-81
Identity = 143/159 (89.94%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIK RPCKV+EVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLT++G+TKDDLRLPTD
Sbjct: 61  VGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           +NLLSQIKDGFAEGKDL+V+VMS+MGEE+IC+LKDIGPK
Sbjct: 121 ENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy Swiss-Prot
Match: P56336 (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 2.6e-81
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEH FESKADAGASKTYPQQAGTIRK+GYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           D+LLSQIKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy Swiss-Prot
Match: Q9AXQ4 (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.4e-81
Identity = 146/159 (91.82%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFT KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDLRLPTD
Sbjct: 61  VAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           +NLLS IKDGFAEGKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 ENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy Swiss-Prot
Match: Q945F4 (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.8e-81
Identity = 143/159 (89.94%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFE  ADAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIF  KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+GSTKDDL+LPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           D+LL+QIKDGFA+GKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D1G5 (Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00070 PE=3 SV=1)

HSP 1 Score: 322 bits (824), Expect = 6.82e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BFT8 (Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489162 PE=3 SV=1)

HSP 1 Score: 322 bits (824), Expect = 6.82e-111
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KU59 (Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G606480 PE=3 SV=1)

HSP 1 Score: 315 bits (807), Expect = 2.67e-108
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAG IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGAIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSG+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           D LL+QIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 DGLLTQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy TrEMBL
Match: A0A6J1DCF3 (Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LOC111019214 PE=3 SV=1)

HSP 1 Score: 314 bits (805), Expect = 5.38e-108
Identity = 155/159 (97.48%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFT KKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD
Sbjct: 61  VGIDIFTTKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           ++LLSQIKDGF EGKDLIVTVMSSMGEEQICALKDIGPK
Sbjct: 121 ESLLSQIKDGFNEGKDLIVTVMSSMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IIZ4 (Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC111476711 PE=3 SV=1)

HSP 1 Score: 312 bits (800), Expect = 3.22e-107
Identity = 151/159 (94.97%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           VGIDIFTAKKLEDIVPSSHNCDVPHV+RTDYQLIDISEDGF+SLLTD+G+TKDDLRLPTD
Sbjct: 61  VGIDIFTAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 175
           DNLLSQIKDGFAEGKDL+V+VMS+MGEEQICALKDIGPK
Sbjct: 121 DNLLSQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159

[Close]

BLAST of MELO3C012131.jh1 vs. TAIR 10
Match: AT1G13950.1 (eukaryotic elongation factor 5A-1 )

HSP 1 Score: 287.3 bits (734), Expect = 8.0e-78
Identity = 139/159 (87.42%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFT+KKLEDIVPSSHNCDVPHV+RTDYQLIDISEDG++SLLTD+GSTKDDL+LP D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPND 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           D LL QIK GF +GKDL+V+VMS+MGEEQI ALKDIGPK
Sbjct: 121 DTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158

[Close]

BLAST of MELO3C012131.jh1 vs. TAIR 10
Match: AT1G69410.1 (eukaryotic elongation factor 5A-3 )

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-76
Identity = 133/159 (83.65%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFT+KKLEDIVPSSHNCDVPHV+R DYQLIDISEDGF+SLLTD+GSTKDDL+LPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIGPK 176
           + LL+Q+K+GF EGKD++V+VMS+MGEEQ+CALK++GPK
Sbjct: 121 EALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158

[Close]

BLAST of MELO3C012131.jh1 vs. TAIR 10
Match: AT1G26630.1 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 268.1 bits (684), Expect = 5.0e-72
Identity = 126/157 (80.25%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDGF+SLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 137 DNLLSQIKDGFAEGKDLIVTVMSSMGEEQICALKDIG 174
           D L +Q++ GF EGKD++V+VMSSMGEEQICA+K++G
Sbjct: 121 DGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156

[Close]

BLAST of MELO3C012131.jh1 vs. TAIR 10
Match: AT1G26630.2 (Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein )

HSP 1 Score: 223.0 bits (567), Expect = 1.9e-58
Identity = 105/127 (82.68%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 17  MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHF 76
           MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 77  VGIDIFTAKKLEDIVPSSHNCDVPHVSRTDYQLIDISEDGFISLLTDSGSTKDDLRLPTD 136
           V IDIFTAKKLEDIVPSSHNCDVPHV+R DYQLIDI+EDGF+SLLTDSG TKDDL+LPTD
Sbjct: 61  VAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTD 120

Query: 137 DNLLSQI 144
           D L +Q+
Sbjct: 121 DGLTAQL 126

The following BLAST results are available for this feature:

BLAST of MELO3C012131.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446407.1	1.41e-110	100.00	PREDICTED: eukaryotic translation initiation factor 5A-2 [Cucumis melo] >KAA0034...	[more]
XP_038893432.1	9.52e-109	98.11	eukaryotic translation initiation factor 5A-4 [Benincasa hispida]	[more]
XP_004135157.1	5.51e-108	97.48	eukaryotic translation initiation factor 5A-2 [Cucumis sativus] >KGN51957.1 hypo...	[more]
XP_022151244.1	1.11e-107	97.48	eukaryotic translation initiation factor 5A-4-like [Momordica charantia]	[more]
XP_020549090.1	3.19e-107	94.97	eukaryotic translation initiation factor 5A-3 [Sesamum indicum]	[more]

BLAST of MELO3C012131.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24922	1.8e-82	91.82	Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia OX=40...	[more]
Q9AXJ4	1.2e-81	89.94	Eukaryotic translation initiation factor 5A OS=Manihot esculenta OX=3983 PE=2 SV...	[more]
P56336	2.6e-81	91.82	Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum OX=4113 GN=EI...	[more]
Q9AXQ4	3.4e-81	91.82	Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum OX=4081 PE...	[more]
Q945F4	5.8e-81	89.94	Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa OX=3879 PE=2 SV...	[more]

BLAST of MELO3C012131.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D1G5	6.82e-111	100.00	Eukaryotic translation initiation factor 5A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BFT8	6.82e-111	100.00	Eukaryotic translation initiation factor 5A OS=Cucumis melo OX=3656 GN=LOC103489...	[more]
A0A0A0KU59	2.67e-108	97.48	Eukaryotic translation initiation factor 5A OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A6J1DCF3	5.38e-108	97.48	Eukaryotic translation initiation factor 5A OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1IIZ4	3.22e-107	94.97	Eukaryotic translation initiation factor 5A OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of MELO3C012131.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13950.1	8.0e-78	87.42	eukaryotic elongation factor 5A-1	[more]
AT1G69410.1	1.2e-76	83.65	eukaryotic elongation factor 5A-3	[more]
AT1G26630.1	5.0e-72	80.25	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]
AT1G26630.2	1.9e-58	82.68	Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020189	Translation elongation factor, IF5A C-terminal	SMART	SM01376	eIF_5a_2	coord: 101..170 e-value: 1.1E-32 score: 124.5
IPR020189	Translation elongation factor, IF5A C-terminal	PFAM	PF01287	eIF-5a	coord: 101..170 e-value: 1.3E-28 score: 98.9
IPR001884	Translation elongation factor IF5A-like	PIRSF	PIRSF003025	Transl_init_eIF5A	coord: 17..173 e-value: 4.2E-66 score: 219.2
IPR001884	Translation elongation factor IF5A-like	TIGRFAM	TIGR00037	TIGR00037	coord: 33..169 e-value: 1.1E-40 score: 136.4
IPR001884	Translation elongation factor IF5A-like	PANTHER	PTHR11673	TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER	coord: 17..172
None	No IPR available	GENE3D	2.40.50.140		coord: 102..174 e-value: 1.5E-33 score: 116.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR11673:SF42	BNAA07G09420D PROTEIN	coord: 17..172
None	No IPR available	CDD	cd04468	S1_eIF5A	coord: 102..172 e-value: 9.70184E-31 score: 104.542
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 17..101 e-value: 1.9E-43 score: 148.2
IPR019769	Translation elongation factor, IF5A, hypusine site	PROSITE	PS00302	IF5A_HYPUSINE	coord: 66..73
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 31..109
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 102..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012131.jh1.t1	MELO3C012131.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003746	translation elongation factor activity