MELO3C012038.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TAGGCATAATTAAGCAAATTGCACTGCAGCTCGAAGTTGAACCCAAGTGCTCGAGCGCGGGCGGTGGGTTGTCTCCCCTTGGGCTTGAGTCCAGATCCCGGCAAATTAGTTAATTATCGTTGTACTTCGTTGCAATGGAAGCGGGAATTTTCTTCGCCGTCACTCCAATTCCATGGACTTCCAATTTCAAGCGCACTCACTCTTCCCTTCGTCGTTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCCACTTCACAGCGAAGTTACAGGGGCCCGAAGCCTTCAACTGATTTGGTGGCCGATTGGGTGTCCAACAACGATGATACCGTTCGGAGTTCGCCCATTTACGTCGGTGGAATTTCTCTCTTGCTCGTGCTCTTTAATCGCGCCGTTTCCGGCATTGCTCCCGTCGCCGATGCCAGCAGGTTCGTTCAAGTTAAACCAATTTATCCATTATCGAATGCTGTTTACTTCCACTAGTCAATTTGTATTTGCTTTTTCTGGAATATTATAAATGCATCGCTATAATTAGTTTTAAATTGAGAGAAGAAATCAATAATTCGTTGAGGCAAGAATGGAAATTCTAATCTTCGATAATGGTGCTTTCCTAATTTGGTGGGATTGTTCTGCAAATAATATTTGCTTTGAGCTTGTTCTTTACGTAATTGGTTGTTCTATTTATATTGATGAACTTTTTTAATTCCGGCAGTTCACAGTCAAGAGCTGATCTGTTAACCCTAGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTGAGGAGTTTACGATAAGATTTTCATACTTAACCTCTCCTCTCTCGCTGCAACAATCAGCTCAGGAGTAGCCTGTTTCTACTTATTTTCTTATTTGTTACCCCTAATTTCATTTTCCGTATCAGGTAAATCCACTAGGAGTAGAATATGAGTGGATTTGCTCCAGTCTCCCTGATCGTGTAACATCTGAGTTGTTATGGTAAAGACTATAGAATTTTCCTCTATGATATTTTAAAACTGTGTCGCTAAGATCATTGAAAATCACCTTTTGATACTTGGGATGTTTGGTTGGCTTAGTTAATGGAGATTGATGAGCGAAACATGATGGTTTTGGAATTGTATAATCCATATGTCATTTTGTCTCCCCTCATTGTCACATGATCGTGCAAATTTTTAATGATGGAGAAAGCCAACTTCATATGCCATGTATCTCATAAAAAGGGAAATCCTGGACTAGGTGGTAAATGGTTACTTTTTGCTGCCATTACGTAGGGTATGGAAGTCTCTGTCAGAAGTAACATGCTGCCGGTCTCTGGTTGTTGTTTATGATGGCAAGTGTATACTTCAAGTTGGTTTTGCTGCTGAATCAGCCGAGGGTGATGGTGAGGCTGAACGTGTTGAAGCTGGTAAACTGATGCAGGGATTGCTCTATAAGGGAGTCCTCAAATCTCAAGCTCGTGAGTAGTAAATGACCTGTGCACAGAGACCATCACAGAATGTACTACTTGATTGCCGTGCAGTTGTAAATATCTGTAACCATTCGTTTTGAGAAACTATCCTTCCTATTTCTGCAGAGAGCTACTTGGCCAATCTCTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGTACTTTGCTTAATACTATCCAGGTCGCTGTTAGATTTGTTCCTTTTTTCTGTTTTCTTATCTTTCTAGAATAATCAACTGGTACACAGCTTTACAGTGCTTCATTTTTTGGCATTTATTACTCTTATAAATAATATAACTAGCAGACATATAAACTAATTGGGAGTTCAGAGGTCTTTTCTATGCCCACTTACTCTTCTTGTTCGTTGGAACGAGGGTCTGCTACTCGGTAAAGTACAGAGGAATGAGATAAATTTTTCTATTCAATTTGTATTTTTTGAGGTTCTATCAGTTAAATAGGATTTATTTCCTCACTTGGTTACTTATGGGCTTCCTTATTTGGAAGGCGGTAGCCAATTTAATACCTGAAAACTTGGAATTTTGTCAGTCCTAAGAGACTGTAGCTGGTCTGTTGATCTGTTTCTAATAAACTAATCGTCATTGAACTTGAGCTCCCTTGCTCACACTGTGTTTGTGAAGGTGGAATTATTTTCTTTAGAAGT TAGGCATAATTAAGCAAATTGCACTGCAGCTCGAAGTTGAACCCAAGTGCTCGAGCGCGGGCGGTGGGTTGTCTCCCCTTGGGCTTGAGTCCAGATCCCGGCAAATTAGTTAATTATCGTTGTACTTCGTTGCAATGGAAGCGGGAATTTTCTTCGCCGTCACTCCAATTCCATGGACTTCCAATTTCAAGCGCACTCACTCTTCCCTTCGTCGTTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCCACTTCACAGCGAAGTTACAGGGGCCCGAAGCCTTCAACTGATTTGGTGGCCGATTGGGTGTCCAACAACGATGATACCGTTCGGAGTTCGCCCATTTACGTCGGTGGAATTTCTCTCTTGCTCGTGCTCTTTAATCGCGCCGTTTCCGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTGTTAACCCTAGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACTAGGAGTAGAATATGAGTGGATTTGCTCCAGTCTCCCTGATCGTGTAACATCTGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTAACATGCTGCCGGTCTCTGGTTGTTGTTTATGATGGCAAGTGTATACTTCAAGTTGGTTTTGCTGCTGAATCAGCCGAGGGTGATGGTGAGGCTGAACGTGTTGAAGCTGGTAAACTGATGCAGGGATTGCTCTATAAGGGAGTCCTCAAATCTCAAGCTCAGAGCTACTTGGCCAATCTCTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGTACTTTGCTTAATACTATCCAGGTCGCTGTTAGATTTGTTCCTTTTTTCTGTTTTCTTATCTTTCTAGAATAATCAACTGGTACACAGCTTTACAGTGCTTCATTTTTTGGCATTTATTACTCTTATAAATAATATAACTAGCAGACATATAAACTAATTGGGAGTTCAGAGGTCTTTTCTATGCCCACTTACTCTTCTTGTTCGTTGGAACGAGGGTCTGCTACTCGGTAAAGTACAGAGGAATGAGATAAATTTTTCTATTCAATTTGTATTTTTTGAGGTTCTATCAGTTAAATAGGATTTATTTCCTCACTTGGTTACTTATGGGCTTCCTTATTTGGAAGGCGGTAGCCAATTTAATACCTGAAAACTTGGAATTTTGTCAGTCCTAAGAGACTGTAGCTGGTCTGTTGATCTGTTTCTAATAAACTAATCGTCATTGAACTTGAGCTCCCTTGCTCACACTGTGTTTGTGAAGGTGGAATTATTTTCTTTAGAAGT ATGGAAGCGGGAATTTTCTTCGCCGTCACTCCAATTCCATGGACTTCCAATTTCAAGCGCACTCACTCTTCCCTTCGTCGTTCTTTCCCGCGTATCATAAGGGCTTCTTCTTCCACTTCACAGCGAAGTTACAGGGGCCCGAAGCCTTCAACTGATTTGGTGGCCGATTGGGTGTCCAACAACGATGATACCGTTCGGAGTTCGCCCATTTACGTCGGTGGAATTTCTCTCTTGCTCGTGCTCTTTAATCGCGCCGTTTCCGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTGTTAACCCTAGGACTTGCTGTTACGAATGTCTTGGCTGGTTTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACTAGGAGTAGAATATGAGTGGATTTGCTCCAGTCTCCCTGATCGTGTAACATCTGAGTTGTTATGGGTATGGAAGTCTCTGTCAGAAGTAACATGCTGCCGGTCTCTGGTTGTTGTTTATGATGGCAAGTGTATACTTCAAGTTGGTTTTGCTGCTGAATCAGCCGAGGGTGATGGTGAGGCTGAACGTGTTGAAGCTGGTAAACTGATGCAGGGATTGCTCTATAAGGGAGTCCTCAAATCTCAAGCTCAGAGCTACTTGGCCAATCTCTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGTACTTTGCTTAATACTATCCAGGTCGCTGTTAGATTTGTTCCTTTTTTCTGTTTTCTTATCTTTCTAG MEAGIFFAVTPIPWTSNFKRTHSSLRRSFPRIIRASSSTSQRSYRGPKPSTDLVADWVSNNDDTVRSSPIYVGGISLLLVLFNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVWLSIRPKSITPVNPLGVEYEWICSSLPDRVTSELLWVWKSLSEVTCCRSLVVVYDGKCILQVGFAAESAEGDGEAERVEAGKLMQGLLYKGVLKSQAQSYLANLSLYPGKSELPFLPSNTQVLCLILSRSLLDLFLFSVFLSF Homology
BLAST of MELO3C012038.jh1 vs. NCBI nr
Match: XP_008446278.1 (PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucumis melo] >KAA0034354.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 [Cucumis melo var. makuwa] >TYK15565.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 [Cucumis melo var. makuwa]) HSP 1 Score: 588 bits (1517), Expect = 8.11e-212 Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. NCBI nr
Match: XP_004135215.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucumis sativus]) HSP 1 Score: 548 bits (1411), Expect = 1.16e-195 Identity = 279/300 (93.00%), Postives = 285/300 (95.00%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. NCBI nr
Match: XP_038892078.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 526 bits (1354), Expect = 5.64e-187 Identity = 270/300 (90.00%), Postives = 274/300 (91.33%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. NCBI nr
Match: XP_022984820.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 515 bits (1327), Expect = 7.33e-183 Identity = 265/299 (88.63%), Postives = 273/299 (91.30%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. NCBI nr
Match: XP_022956789.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata] >KAG6601389.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 515 bits (1327), Expect = 7.33e-183 Identity = 265/299 (88.63%), Postives = 273/299 (91.30%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. ExPASy Swiss-Prot
Match: Q6NQK9 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB4 PE=1 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 1.1e-103 Identity = 199/288 (69.10%), Postives = 233/288 (80.90%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. ExPASy TrEMBL
Match: A0A5A7ST12 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00590 PE=4 SV=1) HSP 1 Score: 588 bits (1517), Expect = 3.93e-212 Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BFC6 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489053 PE=4 SV=1) HSP 1 Score: 588 bits (1517), Expect = 3.93e-212 Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KQF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603980 PE=4 SV=1) HSP 1 Score: 548 bits (1411), Expect = 5.63e-196 Identity = 279/300 (93.00%), Postives = 285/300 (95.00%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J9M5 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482990 PE=4 SV=1) HSP 1 Score: 515 bits (1327), Expect = 3.55e-183 Identity = 265/299 (88.63%), Postives = 273/299 (91.30%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. ExPASy TrEMBL
Match: A0A6J1H029 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458387 PE=4 SV=1) HSP 1 Score: 515 bits (1327), Expect = 3.55e-183 Identity = 265/299 (88.63%), Postives = 273/299 (91.30%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. TAIR 10
Match: AT1G59840.1 (cofactor assembly of complex C ) HSP 1 Score: 377.9 bits (969), Expect = 7.7e-105 Identity = 199/288 (69.10%), Postives = 233/288 (80.90%), Query Frame = 0
BLAST of MELO3C012038.jh1 vs. TAIR 10
Match: AT1G59840.2 (cofactor assembly of complex C ) HSP 1 Score: 377.9 bits (969), Expect = 7.7e-105 Identity = 199/288 (69.10%), Postives = 233/288 (80.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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