MELO3C011803 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011803
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	F-box protein At2g35280-like
Location	chr10: 4635241 .. 4636114 (+)
RNA-Seq Expression	MELO3C011803
Synteny	MELO3C011803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCAATTCAAAAGAAAATCAAAATCTTTGAACTATCAGATTTCAACGTAAGTTTAATTCTTCAATATTGTGTTTACGGAATTTAGTTGTTTAGTTATTATTAATACAATTGTTAATTTTCTTTTTTTCTGATTTATTTTCATGCAGAAGATCAACAAAAATGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCAAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAATGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCGAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATGAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAATACAGTCGAAAACACTTTGCAATAATAGAACTAAATGTAGGGTTAATGAGAGAAGAGATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTATAGTAATTAA

mRNA sequence

ATGGCGAATCAATTCAAAAGAAAATCAAAATCTTTGAACTATCAGATTTCAACAAGATCAACAAAAATGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCAAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAATGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCGAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATGAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAATACAGTCGAAAACACTTTGCAATAATAGAACTAAATGTAGGGTTAATGAGAGAAGAGATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTATAGTAATTAA

Coding sequence (CDS)

ATGGCGAATCAATTCAAAAGAAAATCAAAATCTTTGAACTATCAGATTTCAACAAGATCAACAAAAATGATGTGCAAACCCCTTTCTTCATCCCTCATTGTATCACTCCCAAACGATCTATTAATCGAAGTTCTTGCAAAAGTCGCATCTTCTTCTTACGTTGACTTAGTACGAGCCAAATTAGCCACCAAACTTTTCCTCCATGCATCAAATGACCGATACATATTCCGACACGTGTCGCTTAAAAACGAAAGCTTTAGGAACCTTCTATGGAACAACACCCCCGAATTTTGGTCCTTTGTAGAAACTTGCAATAACAATGAAAATCCAGAGAGTCTATATCGAAAAGGAATGTTGGAATTTTTCACTCATTGTAACGAAGCTTCTGGATTGGCTTGTTTAAAACTATCGGCTCAAAAAGGGTACGTGGATGCTTGTTATGTATATGGCGTCGTTCTGTACGCAGCCGATTTGGTAGATGAAGGACTTGCATATTTGAAGATGTGTGAGGTGAAATTAGGGAATAAGATGGCGGAATGTCGTCGGAGAGTTAAGGAGTTTGTTTGGTATTTTTGGGTAAAGAATAAGATTTCAATACAGTCGAAAACACTTTGCAATAATAGAACTAAATGTAGGGTTAATGAGAGAAGAGATGGTTGGGATTGGAAAGATGAAGACGATTATTATGGAGAACACACGTGTGAAGAGTGTAAATGGAAGAACGAGGTTTCGAGATTTTGTAATATGTTGAGAAGCGGAGGGTATAGTAATTAA

Protein sequence

MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN

Homology

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BLAST of MELO3C011803 vs. NCBI nr
Match: KAA0034134.1 (putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 417.9 bits (1073), Expect = 6.2e-113
Identity = 207/234 (88.46%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 24  MCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
           MCKPLSS LIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  ESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
           ESFRNLLWNNTP+FWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKT 203
           DACYVYGVVLYAADLVDEGLAYLKMCEVKL NKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 LCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 258
                    VNERR+GWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

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BLAST of MELO3C011803 vs. NCBI nr
Match: KAE8648647.1 (hypothetical protein Csa_009058 [Cucumis sativus])

HSP 1 Score: 412.5 bits (1059), Expect = 2.6e-111
Identity = 205/258 (79.46%), Postives = 230/258 (89.15%), Query Frame = 0


Query: 1   MANQFKRKSK-SLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRA 60
           MANQ KRKS+ S N QISTR TK MC+P SSSLIVSLPNDLLIEVLAKVA+SSY+DLV+A
Sbjct: 1   MANQLKRKSEPSFNSQISTR-TKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQA 60

Query: 61  KLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGML 120
           KLATKLFLHASND YIF+HVSL+N+SFRNLLWNNTP+  SF+ET NNNENPESLYRKG +
Sbjct: 61  KLATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTM 120

Query: 121 EFFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAE 180
           EFF+H  EASGL+ LK SAQKGYVDACYVYGVV+YAA+L +EG+ YLKMCE KLGNKMAE
Sbjct: 121 EFFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAE 180

Query: 181 CRRRVKEFVWYFWVKNKISIQSKTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKW 240
           CRRRVKEFVWYFW+KN+IS+ SK +C+N   C+VNER +GWDWKDEDDYYGEHTCE+CKW
Sbjct: 181 CRRRVKEFVWYFWIKNRISM-SKEICSN-VNCKVNERSNGWDWKDEDDYYGEHTCEQCKW 240

Query: 241 KNEVSRFCNMLRSGGYSN 258
            NEV RFCNMLR GGYSN
Sbjct: 241 SNEVLRFCNMLRRGGYSN 255

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BLAST of MELO3C011803 vs. NCBI nr
Match: XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 170/234 (72.65%), Postives = 193/234 (82.48%), Query Frame = 0


Query: 29  SSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRN 88
           S S+I SLPNDLLIEVLAKVA+SSY DLV+AKLATK FL  SN+ YIFRHVSL N  F  
Sbjct: 6   SPSVIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGN--FSK 65

Query: 89  LLWNNTPEFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYVDACYV 148
           LLWNN+PEFWS +ETCNNNENPESLYRKGMLEFFTHC EASGL  LK SA+K Y+DACYV
Sbjct: 66  LLWNNSPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACYV 125

Query: 149 YGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKTL---- 208
           YGVVLYA +L +EGL +L+ CE KLGNKM+ECRRRVKEFVW  W+KNK+S+  K      
Sbjct: 126 YGVVLYATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGRR 185

Query: 209 -CNN--RTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGY 256
            C+N  +  C +NE+R+GWDWKDEDD+YGEHTCEECKWK EVSRFCNMLR+G Y
Sbjct: 186 YCSNVIKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAY 237

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BLAST of MELO3C011803 vs. NCBI nr
Match: XP_004137554.1 (putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical protein Csa_013173 [Cucumis sativus])

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-92
Identity = 178/259 (68.73%), Postives = 208/259 (80.31%), Query Frame = 0


Query: 3   NQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLA 62
           NQ KR S +L+ QIS  + K     LS ++I SLPNDLL EVLAKVA+SSY+DL++AKLA
Sbjct: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63

Query: 63  TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFF 122
           TK FL ASNDRYIF+HVSL N  FRNLLWNN+P+FWSF+ETCNN+ENPESLYRKGMLEFF
Sbjct: 64  TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123

Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRR 182
           THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK  EVKLGNKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183

Query: 183 RVKEFVWYFWVKNKISIQS-----KTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEEC 242
           RVKEFV Y W+KNKIS+          C+    CRVNE+ + WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243

Query: 243 KWKNEVSRFCNMLRSGGYS 257
           KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of MELO3C011803 vs. NCBI nr
Match: XP_008453691.1 (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 5.1e-91
Identity = 178/260 (68.46%), Postives = 198/260 (76.15%), Query Frame = 0


Query: 1   MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MAN  K KS   +  IS  + K     LS ++I SLPNDLL EVLAKVA+SSYVDLV+AK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS DRYIF+HVSL N  F N LWNN+PEFWSF+ETCNNNENPESLYRKGMLE
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASGLA LKLSAQKGYVDACYV  V+LYA+   DEG  +LK  E KL NKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180

Query: 181 RRRVKEFVWYFWVKNKISIQSK----TLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEE 240
           R RVK FV Y W+KN+IS   +      C+    CRVNERR+ WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240

Query: 241 CKWKNEVSRFCNMLRSGGYS 257
           CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of MELO3C011803 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-14
Identity = 67/242 (27.69%), Postives = 114/242 (47.11%), Query Frame = 0


Query: 9   SKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLH 68
           S SL+   S R +K      +S  + SLP DLL+E+ +   +SS   +   +L +K F  
Sbjct: 4   SLSLHASSSIRKSKTK----ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRR 63

Query: 69  ASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFFTHCNEA 128
             +++Y+F  +SLK   F  L W+       F+E C  + NPE+L++KG + +F    + 
Sbjct: 64  ICDEKYVFYRLSLKEIEF--LPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQD 123

Query: 129 SGLACLKLSAQKGYVDACYVYGVVL--YAADLVDEGL----AYLKMCEVKLGNKMAECRR 188
            GL  L  +A+KG  +A YVYGV+L         +G     + +K       N++ E R 
Sbjct: 124 RGLEYLAEAAEKGIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRY 183

Query: 189 RVKEFVWYFWVKNKISIQ--------SKTLCNNRTKCRVNERRDGWD-WKDEDDYYGEHT 236
           ++++  + FW  +   ++         K  C+ +T+  +     GW  + DE D      
Sbjct: 184 KIQKIRYGFWWSDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSA 237

[Close]

BLAST of MELO3C011803 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.6e-05
Identity = 38/142 (26.76%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 31  SLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLL 90
           S + +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L 
Sbjct: 9   SRLEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL- 68

Query: 91  WNNTPEFWSFVETCNNNENPESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYV 150
             +  +    ++ C  N NP++ Y KG++ +F   HC+    L  + ++A  G  +A Y+
Sbjct: 69  --SCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYM 128

Query: 151 YGVVLYAADLVDEGLAYLKMCE 171
           Y ++L      +EG  Y+   E
Sbjct: 129 YAMLLLCRGRTEEGKTYMSQLE 145

[Close]

BLAST of MELO3C011803 vs. ExPASy TrEMBL
Match: A0A5A7SSE7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002890 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113
Identity = 207/234 (88.46%), Postives = 209/234 (89.32%), Query Frame = 0


Query: 24  MCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 83
           MCKPLSS LIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN
Sbjct: 1   MCKPLSSPLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKN 60

Query: 84  ESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 143
           ESFRNLLWNNTP+FWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV
Sbjct: 61  ESFRNLLWNNTPKFWSFVETCNNNENPESLYRKGMLEFFTHCNEASGLACLKLSAQKGYV 120

Query: 144 DACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRRRVKEFVWYFWVKNKISIQSKT 203
           DACYVYGVVLYAADLVDEGLAYLKMCEVKL NKMAECRRRVKEFVW              
Sbjct: 121 DACYVYGVVLYAADLVDEGLAYLKMCEVKLRNKMAECRRRVKEFVW-------------- 180

Query: 204 LCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 258
                    VNERR+GWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN
Sbjct: 181 ---------VNERRNGWDWKDEDDYYGEHTCEECKWKNEVSRFCNMLRSGGYSN 211

[Close]

BLAST of MELO3C011803 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.7e-93
Identity = 178/259 (68.73%), Postives = 208/259 (80.31%), Query Frame = 0


Query: 3   NQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLA 62
           NQ KR S +L+ QIS  + K     LS ++I SLPNDLL EVLAKVA+SSY+DL++AKLA
Sbjct: 4   NQPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLA 63

Query: 63  TKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFF 122
           TK FL ASNDRYIF+HVSL N  FRNLLWNN+P+FWSF+ETCNN+ENPESLYRKGMLEFF
Sbjct: 64  TKHFLEASNDRYIFQHVSLGN--FRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFF 123

Query: 123 THCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAECRR 182
           THC EASG+A LK SAQKGYVDACYV+GV+LYA++L DEGL +LK  EVKLGNKM ECR+
Sbjct: 124 THCKEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQ 183

Query: 183 RVKEFVWYFWVKNKISIQS-----KTLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEEC 242
           RVKEFV Y W+KNKIS+          C+    CRVNE+ + WD KDEDDYYG++TCEEC
Sbjct: 184 RVKEFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEEC 243

Query: 243 KWKNEVSRFCNMLRSGGYS 257
           KW NEV RFC MLR+G +S
Sbjct: 244 KWNNEVLRFCKMLRTGRFS 260

[Close]

BLAST of MELO3C011803 vs. ExPASy TrEMBL
Match: A0A1S3BXN2 (putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.5e-91
Identity = 178/260 (68.46%), Postives = 198/260 (76.15%), Query Frame = 0


Query: 1   MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MAN  K KS   +  IS  + K     LS ++I SLPNDLL EVLAKVA+SSYVDLV+AK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS DRYIF+HVSL N  F N LWNN+PEFWSF+ETCNNNENPESLYRKGMLE
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGN--FENHLWNNSPEFWSFIETCNNNENPESLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASGLA LKLSAQKGYVDACYV  V+LYA+   DEG  +LK  E KL NKMAEC
Sbjct: 121 FFTHCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAEC 180

Query: 181 RRRVKEFVWYFWVKNKISIQSK----TLCNNRTKCRVNERRDGWDWKDEDDYYGEHTCEE 240
           R RVK FV Y W+KN+IS   +      C+    CRVNERR+ WDWKDEDDYYGE+TCE+
Sbjct: 181 RWRVKRFVSYLWIKNRISSSGEDPNDRKCDKNINCRVNERRNSWDWKDEDDYYGEYTCEK 240

Query: 241 CKWKNEVSRFCNMLRSGGYS 257
           CKW NEV RFC MLR+G YS
Sbjct: 241 CKWNNEVFRFCKMLRTGRYS 258

[Close]

BLAST of MELO3C011803 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 5.7e-88
Identity = 171/262 (65.27%), Postives = 198/262 (75.57%), Query Frame = 0


Query: 1   MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MA   KRKS++L  QIS R TK      S   I SLPNDLLIE+LAKVA+SSY DLV+AK
Sbjct: 1   MAGSLKRKSQALGSQIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS+  YIF+H SL+N  F  LLWNN+ EFWSF+E CNNN NPE+LYRKGMLE
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASG+  LK+SAQKGY +ACYVYG++LYA  + DEG+ +LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWVKNKISIQSKTL-----CNNRTK--CRVNERRDGWDWKDEDDYYGEHT 240
           RRRVKEFV + WVKNKIS+Q K       C N  K  C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEECKWKNEVSRFCNMLRSGGY 256
           CE CKW  EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of MELO3C011803 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 9.7e-88
Identity = 171/262 (65.27%), Postives = 197/262 (75.19%), Query Frame = 0


Query: 1   MANQFKRKSKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAK 60
           MA   KRKS+SL   IS R TK      S   I SLPNDLLIE+LAKVA+SSY DLV+AK
Sbjct: 1   MAGSLKRKSQSLGSHIS-RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60

Query: 61  LATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLE 120
           LATK FL AS+  YIF+H SL+N  F  LLWNN+ EFWSF+E CNNN NPE+LYRKGMLE
Sbjct: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120

Query: 121 FFTHCNEASGLACLKLSAQKGYVDACYVYGVVLYAADLVDEGLAYLKMCEVKLGNKMAEC 180
           FFTHC EASG+  LK+SAQKGY +ACYVYG++LYA  + DEG+ +LK+CE KLG K+AEC
Sbjct: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180

Query: 181 RRRVKEFVWYFWVKNKISIQSKTL-----CNNRTK--CRVNERRDGWDWKDEDDYYGEHT 240
           RRRVKEFV + WVKNKIS+Q K       C N  K  C+ N RR GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240

Query: 241 CEECKWKNEVSRFCNMLRSGGY 256
           CE CKW  EV RFCNMLR+G Y
Sbjct: 241 CEACKWNGEVLRFCNMLRTGSY 259

[Close]

BLAST of MELO3C011803 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.2e-15
Identity = 67/242 (27.69%), Postives = 114/242 (47.11%), Query Frame = 0


Query: 9   SKSLNYQISTRSTKMMCKPLSSSLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLH 68
           S SL+   S R +K      +S  + SLP DLL+E+ +   +SS   +   +L +K F  
Sbjct: 4   SLSLHASSSIRKSKTK----ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRR 63

Query: 69  ASNDRYIFRHVSLKNESFRNLLWNNTPEFWSFVETCNNNENPESLYRKGMLEFFTHCNEA 128
             +++Y+F  +SLK   F  L W+       F+E C  + NPE+L++KG + +F    + 
Sbjct: 64  ICDEKYVFYRLSLKEIEF--LPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQD 123

Query: 129 SGLACLKLSAQKGYVDACYVYGVVL--YAADLVDEGL----AYLKMCEVKLGNKMAECRR 188
            GL  L  +A+KG  +A YVYGV+L         +G     + +K       N++ E R 
Sbjct: 124 RGLEYLAEAAEKGIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRY 183

Query: 189 RVKEFVWYFWVKNKISIQ--------SKTLCNNRTKCRVNERRDGWD-WKDEDDYYGEHT 236
           ++++  + FW  +   ++         K  C+ +T+  +     GW  + DE D      
Sbjct: 184 KIQKIRYGFWWSDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSA 237

[Close]

BLAST of MELO3C011803 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 0


Query: 38  NDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLLWNNTPEF 97
           N   I ++  V SSS  +    +L +K F   SNDRYI + +SL       L W N  +F
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPL--LPWRNRKKF 76

Query: 98  WSFVETCNNNENPESLYRKGMLEFF---THCNEAS-GLACLKLSAQKGYVDACYVYGVVL 157
            +F + C  + N E++YRKG++++F   +H  +   GL  +  +A  G  +A YVYG++L
Sbjct: 77  HNFFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLIL 136

Query: 158 --YAADLVDEGLAYLKMCE--VKLGN---KMAECRRRVKEFVWY----FWVKNKISIQSK 217
                     G   L      + L N   +M + R  ++   W+         K  ++  
Sbjct: 137 ICLGGKTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNMWWWGEPMMRHLQKSYVREN 196

Query: 218 TLCNNRTKCRVN---ERRDGWDWKDEDDYYGEHTCEECKWKNEVSRF 247
             C+ RT+   N     R G    ++DD      CE C   +EV  F
Sbjct: 197 CNCDGRTEIFPNYCFRHRFG----EDDDMLTSSACEICLCHHEVKLF 237

[Close]

BLAST of MELO3C011803 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-06
Identity = 38/142 (26.76%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 31  SLIVSLPNDLLIEVLAKVASSSYVDLVRAKLATKLFLHASNDRYIFRHVSLKNESFRNLL 90
           S + +LP DLL E++AK+   S  D     L+ K    ++ND  + + ++L     + L 
Sbjct: 9   SRLEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL- 68

Query: 91  WNNTPEFWSFVETCNNNENPESLYRKGMLEFFT--HCNEASGLACLKLSAQKGYVDACYV 150
             +  +    ++ C  N NP++ Y KG++ +F   HC+    L  + ++A  G  +A Y+
Sbjct: 69  --SCRKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHCD--VDLHHIGIAANGGQKEAIYM 128

Query: 151 YGVVLYAADLVDEGLAYLKMCE 171
           Y ++L      +EG  Y+   E
Sbjct: 129 YAMLLLCRGRTEEGKTYMSQLE 145

The following BLAST results are available for this feature:

BLAST of MELO3C011803 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034134.1	6.2e-113	88.46	putative F-box protein [Cucumis melo var. makuwa] >TYK15785.1 putative F-box pro...	[more]
KAE8648647.1	2.6e-111	79.46	hypothetical protein Csa_009058 [Cucumis sativus]	[more]
XP_038891683.1	1.9e-93	72.65	putative F-box protein At1g67623 [Benincasa hispida]	[more]
XP_004137554.1	1.6e-92	68.73	putative F-box protein At1g67623 [Cucumis sativus] >KGN63874.1 hypothetical prot...	[more]
XP_008453691.1	5.1e-91	68.46	PREDICTED: putative F-box protein At1g67623 [Cucumis melo]	[more]

BLAST of MELO3C011803 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXC7	3.1e-14	27.69	Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE...	[more]
Q1PEW8	7.6e-05	26.76	F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1	[more]

BLAST of MELO3C011803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSE7	3.0e-113	88.46	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A0A0LS96	7.7e-93	68.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1	[more]
A0A1S3BXN2	2.5e-91	68.46	putative F-box protein At1g67623 OS=Cucumis melo OX=3656 GN=LOC103494339 PE=4 SV...	[more]
A0A6J1JRX4	5.7e-88	65.27	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=...	[more]
A0A6J1JRV1	9.7e-88	65.27	putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=...	[more]

BLAST of MELO3C011803 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67623.1	2.2e-15	27.69	F-box family protein	[more]
AT1G74875.1	1.1e-11	27.75	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G35280.1	5.4e-06	26.76	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040338	Putative F-box protein At1g67623-like	PANTHER	PTHR33784	OS05G0482100 PROTEIN	coord: 30..251
None	No IPR available	PANTHER	PTHR33784:SF31	F-BOX PROTEIN	coord: 30..251
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 24..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011803.1	MELO3C011803.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding