MELO3C010832.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C010832.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	F-box protein GID2-like
Location	chr03: 28941199 .. 28941954 (-)
RNA-Seq Expression	MELO3C010832.jh1
Synteny	MELO3C010832.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCCCATTCCTCTTCTTTCTATTTCTTCCCCATTTCCCTTTTTTCTCAATAATTTTTCATCTCAAATTCTTCCCCTTTTTCAACCCAATTACCAATGAACAACAAAATCAAGAAATTTAAATCAGATTCAAACCAACAAGAAAAACCAGATGAATCTCAACCACAACCCTCTACCTTTGCAAATTTAGACGACAATTTGTTGTTCGAGGTGTTTAAGCACGTCGATGCAAGGACACTGGCTACCGCCGCCGGCGTCAACAAGCAATGGTTCAAAACAGCTCACGACGAGCGCCTCTGGGAGCTTCTCTGCACCAAACACTGGACCAACCTTGGCTGTGCTAACCAACAGCTACGCTCCGTCGTTCTTGCGCTTGGTGGCTTCCGTCGATTACATTCTCTTTACCCATTTCCCCCTATGATTGGATGTAATCATCCATGGGGCAAAGATGAGGTTCATCTCTCCCTTTCTCTTCTCTCAATTCGCTACTACGAGAAGATGAAGTTTAAAAACAGACCCACATCTTGAAATCCCAAATAATCTAATGTAAGATCACACCAATTGGAGGATGTTCTCTCTCTGTGTTGAAATTGATATTATTATTACTCCTTTTTATTCTACCGTATCGGATCGGATGGATGGATTTGTTTGAATTTAGTTGGTTCTAATTTAACTAACTTATAGATTTTTCTTCTGTCAATTGACTATGGGTTGATTTGCTTGCAATTTTATATTATTTATTCTTATTATTATGTA

mRNA sequence

CTCCCCCATTCCTCTTCTTTCTATTTCTTCCCCATTTCCCTTTTTTCTCAATAATTTTTCATCTCAAATTCTTCCCCTTTTTCAACCCAATTACCAATGAACAACAAAATCAAGAAATTTAAATCAGATTCAAACCAACAAGAAAAACCAGATGAATCTCAACCACAACCCTCTACCTTTGCAAATTTAGACGACAATTTGTTGTTCGAGGTGTTTAAGCACGTCGATGCAAGGACACTGGCTACCGCCGCCGGCGTCAACAAGCAATGGTTCAAAACAGCTCACGACGAGCGCCTCTGGGAGCTTCTCTGCACCAAACACTGGACCAACCTTGGCTGTGCTAACCAACAGCTACGCTCCGTCGTTCTTGCGCTTGGTGGCTTCCGTCGATTACATTCTCTTTACCCATTTCCCCCTATGATTGGATGTAATCATCCATGGGGCAAAGATGAGGTTCATCTCTCCCTTTCTCTTCTCTCAATTCGCTACTACGAGAAGATGAAGTTTAAAAACAGACCCACATCTTGAAATCCCAAATAATCTAATGTAAGATCACACCAATTGGAGGATGTTCTCTCTCTGTGTTGAAATTGATATTATTATTACTCCTTTTTATTCTACCGTATCGGATCGGATGGATGGATTTGTTTGAATTTAGTTGGTTCTAATTTAACTAACTTATAGATTTTTCTTCTGTCAATTGACTATGGGTTGATTTGCTTGCAATTTTATATTATTTATTCTTATTATTATGTA

Coding sequence (CDS)

ATGAACAACAAAATCAAGAAATTTAAATCAGATTCAAACCAACAAGAAAAACCAGATGAATCTCAACCACAACCCTCTACCTTTGCAAATTTAGACGACAATTTGTTGTTCGAGGTGTTTAAGCACGTCGATGCAAGGACACTGGCTACCGCCGCCGGCGTCAACAAGCAATGGTTCAAAACAGCTCACGACGAGCGCCTCTGGGAGCTTCTCTGCACCAAACACTGGACCAACCTTGGCTGTGCTAACCAACAGCTACGCTCCGTCGTTCTTGCGCTTGGTGGCTTCCGTCGATTACATTCTCTTTACCCATTTCCCCCTATGATTGGATGTAATCATCCATGGGGCAAAGATGAGGTTCATCTCTCCCTTTCTCTTCTCTCAATTCGCTACTACGAGAAGATGAAGTTTAAAAACAGACCCACATCTTGA

Protein sequence

MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEVHLSLSLLSIRYYEKMKFKNRPTS

Homology

[Close]

BLAST of MELO3C010832.jh1 vs. NCBI nr
Match: XP_008445558.1 (PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0060929.1 F-box protein GID2-like [Cucumis melo var. makuwa])

HSP 1 Score: 300 bits (767), Expect = 1.08e-102
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60
           MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 143
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

[Close]

BLAST of MELO3C010832.jh1 vs. NCBI nr
Match: XP_004143017.1 (F-box protein GID2 [Cucumis sativus] >KGN62476.1 hypothetical protein Csa_018769 [Cucumis sativus])

HSP 1 Score: 283 bits (725), Expect = 2.66e-96
Identity = 137/143 (95.80%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60
           MNN+IKKFKS SNQQE PD SQPQPSTFANLDDNLLFEVFKHVDARTLAT AGV+KQWFK
Sbjct: 1   MNNRIKKFKSVSNQQE-PDHSQPQPSTFANLDDNLLFEVFKHVDARTLATVAGVSKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 143
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 142

[Close]

BLAST of MELO3C010832.jh1 vs. NCBI nr
Match: KAG6598351.1 (F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029322.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 232 bits (591), Expect = 6.31e-76
Identity = 115/141 (81.56%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 5   IKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHD 64
           +KK KS S +Q+ P    P  S FANLDDNLLFEVFKHVDARTLATAAGV+KQW+KTAHD
Sbjct: 1   MKKIKSVSEEQQSPP---PSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWYKTAHD 60

Query: 65  ERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNH--PWGKDEVHL 124
           E LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP+IG     PWGKDE+HL
Sbjct: 61  EWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIIGSASCIPWGKDELHL 120

Query: 125 SLSLLSIRYYEKMKFKNRPTS 143
           SLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 SLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of MELO3C010832.jh1 vs. NCBI nr
Match: XP_023522812.1 (F-box protein GID2-like [Cucurbita pepo subsp. pepo] >XP_023547045.1 F-box protein GID2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231 bits (590), Expect = 9.27e-76
Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 5   IKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHD 64
           +KK KS S +Q+ P  S    S FANLDDNLLFEVFKHVDARTLATAAGV+KQW+KTAHD
Sbjct: 1   MKKIKSVSQEQQSPPPSSS--SAFANLDDNLLFEVFKHVDARTLATAAGVSKQWYKTAHD 60

Query: 65  ERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNH--PWGKDEVHL 124
           E LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP+IG     PWGKDEVHL
Sbjct: 61  EWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPVIGSASCIPWGKDEVHL 120

Query: 125 SLSLLSIRYYEKMKFKNRPTS 143
           SLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 SLSLLSIRYYEKMKFKNRPTS 139

[Close]

BLAST of MELO3C010832.jh1 vs. NCBI nr
Match: XP_022962352.1 (F-box protein GID2-like [Cucurbita moschata])

HSP 1 Score: 229 bits (583), Expect = 1.05e-74
Identity = 114/141 (80.85%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 5   IKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHD 64
           +KK KS S +Q+ P    P  S FANLDDNLLFEVFKHVDARTLATAAGV+KQW KTAHD
Sbjct: 1   MKKIKSVSEEQQSPP---PSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWCKTAHD 60

Query: 65  ERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNH--PWGKDEVHL 124
           E LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP++G     PWGKDE+HL
Sbjct: 61  EWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIMGSASCIPWGKDELHL 120

Query: 125 SLSLLSIRYYEKMKFKNRPTS 143
           SLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 SLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-39
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 16  EKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHDERLWELLCTKH 75
           +K   ++ +   F+NLD+NL++EV KHVDA+TLA ++ V+K W KTA DERLWEL+CT+H
Sbjct: 20  KKMKSTEEEEIGFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRH 79

Query: 76  WTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHP---WGKDEVHLSLSLLSIRYY 135
           WTN+GC   QLRSVVLALGGFRRLHSLY +P  +   +P   +GKDE+ L+LSLLSIRYY
Sbjct: 80  WTNIGCGQNQLRSVVLALGGFRRLHSLYLWP--LSKPNPRARFGKDELKLTLSLLSIRYY 139

Query: 136 EKMKFKNRP 142
           EKM F  RP
Sbjct: 140 EKMSFTKRP 146

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy Swiss-Prot
Match: Q7XAK4 (F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-23
Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 14  QQEKP--DESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHDERLWELL 73
           Q+E+P  D  + +     +L ++L+FEV +  +ARTLA AA V++ W + A DERLWE  
Sbjct: 57  QEEQPPEDAGEGEQPRVPDLGEDLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLWEAA 116

Query: 74  CTKHWTNLGCANQQLRSVVLALGGFRRLHSLY---------PFPPMIGCNHP---WGKDE 133
           C + W NLG + +QLR+VVL+LGGFRRLH++Y           P   G   P    G+D+
Sbjct: 117 CVREWANLGFSERQLRAVVLSLGGFRRLHAVYIRPLQWRGAGVPRQQGRRQPPVRLGRDQ 176

Query: 134 VHLSLSLLSIRYYEKM 136
           V LSLSL SI +++ M
Sbjct: 177 VQLSLSLFSIGFFQNM 192

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy Swiss-Prot
Match: Q9LUB6 (F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.7e-10
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 34  NLLFEVFKHVDARTLATAAGVNKQWFKTAHDERLWELLCTKHWTNLGCANQQLRSVVLAL 93
           ++L E+ + +D  +L +AA V + W   A ++ +WE LC +  +     +  LRSVV AL
Sbjct: 33  DVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEELCFRQVSPR--PSLSLRSVVSAL 92

Query: 94  GGFRRLHSLYPFPPMIGC-NHPWGKDEVHLSLSLLSIRYYEKM 136
           GG+R L+ L   P +       W +D++ LSLSL  + YYE++
Sbjct: 93  GGYRCLYFLCIRPVLARLPKLLWTRDQLQLSLSLYCVHYYERL 133

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V5E1 (F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00620 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 5.23e-103
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60
           MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 143
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BDV6 (F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103488538 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 5.23e-103
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60
           MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 143
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LR75 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G355020 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 1.29e-96
Identity = 137/143 (95.80%), Postives = 139/143 (97.20%), Query Frame = 0


Query: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60
           MNN+IKKFKS SNQQE PD SQPQPSTFANLDDNLLFEVFKHVDARTLAT AGV+KQWFK
Sbjct: 1   MNNRIKKFKSVSNQQE-PDHSQPQPSTFANLDDNLLFEVFKHVDARTLATVAGVSKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120
           TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKNRPTS 143
           HLSLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 142

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HCI1 (F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111462823 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 5.07e-75
Identity = 114/141 (80.85%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 5   IKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHD 64
           +KK KS S +Q+ P    P  S FANLDDNLLFEVFKHVDARTLATAAGV+KQW KTAHD
Sbjct: 1   MKKIKSVSEEQQSPP---PSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWCKTAHD 60

Query: 65  ERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNH--PWGKDEVHL 124
           E LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPFPP++G     PWGKDE+HL
Sbjct: 61  EWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIMGSASCIPWGKDELHL 120

Query: 125 SLSLLSIRYYEKMKFKNRPTS 143
           SLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 SLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of MELO3C010832.jh1 vs. ExPASy TrEMBL
Match: A0A6J1K7I7 (F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111491869 PE=4 SV=1)

HSP 1 Score: 224 bits (570), Expect = 4.85e-73
Identity = 112/141 (79.43%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 5   IKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHD 64
           +KK KS S +Q+ P    P  S FANLDDNLLFEVFKHVDARTLATA+GV+KQW+KTAHD
Sbjct: 1   MKKIKSVSQEQQSPP---PSSSAFANLDDNLLFEVFKHVDARTLATASGVSKQWYKTAHD 60

Query: 65  ERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNH--PWGKDEVHL 124
           E LWELLCTKHW N+GCAN QLRSVVLALGGFRRLHSLYPFPP+IG      WGK EVHL
Sbjct: 61  EWLWELLCTKHWANIGCANPQLRSVVLALGGFRRLHSLYPFPPIIGSASCIAWGKGEVHL 120

Query: 125 SLSLLSIRYYEKMKFKNRPTS 143
           SLSLLSIRYYEKMKFKNRPTS
Sbjct: 121 SLSLLSIRYYEKMKFKNRPTS 138

[Close]

BLAST of MELO3C010832.jh1 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein )

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 79/129 (61.24%), Postives = 100/129 (77.52%), Query Frame = 0


Query: 16  EKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFKTAHDERLWELLCTKH 75
           +K   ++ +   F+NLD+NL++EV KHVDA+TLA ++ V+K W KTA DERLWEL+CT+H
Sbjct: 20  KKMKSTEEEEIGFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRH 79

Query: 76  WTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHP---WGKDEVHLSLSLLSIRYY 135
           WTN+GC   QLRSVVLALGGFRRLHSLY +P  +   +P   +GKDE+ L+LSLLSIRYY
Sbjct: 80  WTNIGCGQNQLRSVVLALGGFRRLHSLYLWP--LSKPNPRARFGKDELKLTLSLLSIRYY 139

Query: 136 EKMKFKNRP 142
           EKM F  RP
Sbjct: 140 EKMSFTKRP 146

[Close]

BLAST of MELO3C010832.jh1 vs. TAIR 10
Match: AT5G48170.1 (F-box family protein )

HSP 1 Score: 65.5 bits (158), Expect = 4.1e-11
Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 34  NLLFEVFKHVDARTLATAAGVNKQWFKTAHDERLWELLCTKHWTNLGCANQQLRSVVLAL 93
           ++L E+ + +D  +L +AA V + W   A ++ +WE LC +  +     +  LRSVV AL
Sbjct: 33  DVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEELCFRQVSPR--PSLSLRSVVSAL 92

Query: 94  GGFRRLHSLYPFPPMIGC-NHPWGKDEVHLSLSLLSIRYYEKM 136
           GG+R L+ L   P +       W +D++ LSLSL  + YYE++
Sbjct: 93  GGYRCLYFLCIRPVLARLPKLLWTRDQLQLSLSLYCVHYYERL 133

The following BLAST results are available for this feature:

BLAST of MELO3C010832.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445558.1	1.08e-102	100.00	PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0060929.1 F-box protein GI...	[more]
XP_004143017.1	2.66e-96	95.80	F-box protein GID2 [Cucumis sativus] >KGN62476.1 hypothetical protein Csa_018769...	[more]
KAG6598351.1	6.31e-76	81.56	F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029322....	[more]
XP_023522812.1	9.27e-76	82.27	F-box protein GID2-like [Cucurbita pepo subsp. pepo] >XP_023547045.1 F-box prote...	[more]
XP_022962352.1	1.05e-74	80.85	F-box protein GID2-like [Cucurbita moschata]	[more]

BLAST of MELO3C010832.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STX3	2.6e-39	61.24	F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1	[more]
Q7XAK4	2.6e-23	43.38	F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1	[more]
Q9LUB6	5.7e-10	34.95	F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1	[more]

BLAST of MELO3C010832.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5E1	5.23e-103	100.00	F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BDV6	5.23e-103	100.00	F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103488538 PE=4 SV=1	[more]
A0A0A0LR75	1.29e-96	95.80	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G355020 PE=4 ...	[more]
A0A6J1HCI1	5.07e-75	80.85	F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111462823 PE=4 SV=1	[more]
A0A6J1K7I7	4.85e-73	79.43	F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111491869 PE=4 SV=1	[more]

BLAST of MELO3C010832.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24210.1	1.9e-40	61.24	F-box family protein	[more]
AT5G48170.1	4.1e-11	34.95	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 27..72 e-value: 1.6E-5 score: 24.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 25..71 score: 9.497469
None	No IPR available	GENE3D	1.20.1280.50		coord: 14..118 e-value: 9.3E-11 score: 43.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR12874:SF22	F-BOX PROTEIN GID2-LIKE	coord: 112..138 coord: 13..106
IPR045118	F-box only protein FBXO9/FBXO48	PANTHER	PTHR12874	F-BOX ONLY PROTEIN 48-RELATED	coord: 13..106
IPR045118	F-box only protein FBXO9/FBXO48	PANTHER	PTHR12874	F-BOX ONLY PROTEIN 48-RELATED	coord: 112..138
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 21..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C010832.jh1.t1	MELO3C010832.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding