MELO3C010265 (gene) Melon (DHL92) v4

Overview
NameMELO3C010265
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionCharged multivesicular body protein 7 isoform X1
Locationchr02: 15993649 .. 15993911 (+)
RNA-Seq ExpressionMELO3C010265
SyntenyMELO3C010265
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGCCATCTCCTCTGCATCGCGATGTTCGGATTTGAAGCGAGCGGACTGTGTTTGCTCCAACCGATGTTTGTCTACGAAGCTCCAACCGTTGTCCTCACATCTCCACGAACCCAGCCAATGCCGTCACGATCTCCCATTCGCATGGAGCTTATTGCACCATCCATCCTCTTCCGTAGCACACTGCCGCACCAGGGCGTGCTCTCCTCACCGTTGAAGAAGCCTCCGTCCTCGAGTAGTCATGTCCCAAGTGTGGATGCATAG

mRNA sequence

TCAGCCATCTCCTCTGCATCGCGATGTTCGGATTTGAAGCGAGCGGACTGTGTTTGCTCCAACCGATGTTTGTCTACGAAGCTCCAACCGTTGTCCTCACATCTCCACGAACCCAGCCAATGCCGTCACGATCTCCCATTCGCATGGAGCTTATTGCACCATCCATCCTCTTCCGTAGCACACTGCCGCACCAGGGCGTGCTCTCCTCACCGTTGAAGAAGCCTCCGTCCTCGAGTAGTCATGTCCCAAGTGTGGATGCATAG

Coding sequence (CDS)

ATGTTCGGATTTGAAGCGAGCGGACTGTGTTTGCTCCAACCGATGTTTGTCTACGAAGCTCCAACCGTTGTCCTCACATCTCCACGAACCCAGCCAATGCCGTCACGATCTCCCATTCGCATGGAGCTTATTGCACCATCCATCCTCTTCCGTAGCACACTGCCGCACCAGGGCGTGCTCTCCTCACCGTTGAAGAAGCCTCCGTCCTCGAGTAGTCATGTCCCAAGTGTGGATGCATAG

Protein sequence

MFGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLSSPLKKPPSSSSHVPSVDA
Homology
BLAST of MELO3C010265 vs. NCBI nr
Match: TYK03645.1 (charged multivesicular body protein 7 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 5.7e-33
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0

Query: 1   MFGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVL 60
           MFGF+ASGLCLLQPMFVYE PTVVLTSPRTQPMPSRSPIRMELIAPSIL RSTLPHQGVL
Sbjct: 103 MFGFKASGLCLLQPMFVYEVPTVVLTSPRTQPMPSRSPIRMELIAPSILLRSTLPHQGVL 162

Query: 61  SSPLKKPPSSSSHVPSVDA 80
           SSPLKKPPSSSSHVPSVDA
Sbjct: 163 SSPLKKPPSSSSHVPSVDA 181

BLAST of MELO3C010265 vs. NCBI nr
Match: KAA0050041.1 (charged multivesicular body protein 7 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 1   MFGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVL 60
           MF F+ASGLCLLQPMFVYE+PTVVLT PRTQPM SRSPIRMELIAPSIL RSTLPHQGVL
Sbjct: 103 MFRFKASGLCLLQPMFVYESPTVVLTPPRTQPMSSRSPIRMELIAPSILLRSTLPHQGVL 162

Query: 61  SSPLKKPPSSSSHVPSVDA 80
           SSPLKKPPSSSSHVPSVDA
Sbjct: 163 SSPLKKPPSSSSHVPSVDA 181

BLAST of MELO3C010265 vs. NCBI nr
Match: KAA0062299.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-22
Identity = 59/75 (78.67%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 5    EASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLSSPL 64
            E SGLCLLQP+F++EA  VV+TSPRT+P PSRSPI MEL+APSIL RSTL HQG+LS PL
Sbjct: 971  EVSGLCLLQPVFIHEASIVVVTSPRTKPPPSRSPICMELVAPSILLRSTLLHQGMLSLPL 1030

Query: 65   KKPPSSSSHVPSVDA 80
            KKPPSSSSHVPSV A
Sbjct: 1031 KKPPSSSSHVPSVGA 1045

BLAST of MELO3C010265 vs. NCBI nr
Match: KAA0059932.1 (GPI mannosyltransferase 1-like isoform X1 [Cucumis melo var. makuwa] >TYK24878.1 GPI mannosyltransferase 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 1.1e-15
Identity = 53/78 (67.95%), Postives = 59/78 (75.64%), Query Frame = 0

Query: 2   FGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLS 61
           FG +ASGLCLLQPMFV+EA T V+ SPRTQ  PSRSPIRME++APSIL  STL HQ VL 
Sbjct: 245 FGSKASGLCLLQPMFVHEASTAVVASPRTQLPPSRSPIRMEIVAPSILLCSTLSHQDVL- 304

Query: 62  SPLKKPPSSSSHVPSVDA 80
                  SSSS+VPSV A
Sbjct: 305 -------SSSSYVPSVGA 314

BLAST of MELO3C010265 vs. NCBI nr
Match: KAA0047344.1 (zinc finger protein ZAT11 [Cucumis melo var. makuwa])

HSP 1 Score: 80.1 bits (196), Expect = 9.4e-12
Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 4   FEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLSSP 63
           F+ASGL LLQ         +V+ S RTQ   SRSPI +EL+APSI+ RSTLPHQGVL+SP
Sbjct: 161 FKASGLRLLQ---------LVVASLRTQSPLSRSPICVELVAPSIILRSTLPHQGVLTSP 220

Query: 64  LKKPPSSSSHVPS 77
           LKKP SSS+HVPS
Sbjct: 221 LKKPSSSSNHVPS 224

BLAST of MELO3C010265 vs. ExPASy TrEMBL
Match: A0A5D3BX22 (Charged multivesicular body protein 7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00750 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0

Query: 1   MFGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVL 60
           MFGF+ASGLCLLQPMFVYE PTVVLTSPRTQPMPSRSPIRMELIAPSIL RSTLPHQGVL
Sbjct: 103 MFGFKASGLCLLQPMFVYEVPTVVLTSPRTQPMPSRSPIRMELIAPSILLRSTLPHQGVL 162

Query: 61  SSPLKKPPSSSSHVPSVDA 80
           SSPLKKPPSSSSHVPSVDA
Sbjct: 163 SSPLKKPPSSSSHVPSVDA 181

BLAST of MELO3C010265 vs. ExPASy TrEMBL
Match: A0A5A7U8W2 (Charged multivesicular body protein 7 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00170 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.7e-31
Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0

Query: 1   MFGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVL 60
           MF F+ASGLCLLQPMFVYE+PTVVLT PRTQPM SRSPIRMELIAPSIL RSTLPHQGVL
Sbjct: 103 MFRFKASGLCLLQPMFVYESPTVVLTPPRTQPMSSRSPIRMELIAPSILLRSTLPHQGVL 162

Query: 61  SSPLKKPPSSSSHVPSVDA 80
           SSPLKKPPSSSSHVPSVDA
Sbjct: 163 SSPLKKPPSSSSHVPSVDA 181

BLAST of MELO3C010265 vs. ExPASy TrEMBL
Match: A0A5A7V9C3 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00450 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.8e-23
Identity = 59/75 (78.67%), Postives = 66/75 (88.00%), Query Frame = 0

Query: 5    EASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLSSPL 64
            E SGLCLLQP+F++EA  VV+TSPRT+P PSRSPI MEL+APSIL RSTL HQG+LS PL
Sbjct: 971  EVSGLCLLQPVFIHEASIVVVTSPRTKPPPSRSPICMELVAPSILLRSTLLHQGMLSLPL 1030

Query: 65   KKPPSSSSHVPSVDA 80
            KKPPSSSSHVPSV A
Sbjct: 1031 KKPPSSSSHVPSVGA 1045

BLAST of MELO3C010265 vs. ExPASy TrEMBL
Match: A0A5D3DMR1 (GPI mannosyltransferase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G001490 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.2e-16
Identity = 53/78 (67.95%), Postives = 59/78 (75.64%), Query Frame = 0

Query: 2   FGFEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLS 61
           FG +ASGLCLLQPMFV+EA T V+ SPRTQ  PSRSPIRME++APSIL  STL HQ VL 
Sbjct: 245 FGSKASGLCLLQPMFVHEASTAVVASPRTQLPPSRSPIRMEIVAPSILLCSTLSHQDVL- 304

Query: 62  SPLKKPPSSSSHVPSVDA 80
                  SSSS+VPSV A
Sbjct: 305 -------SSSSYVPSVGA 314

BLAST of MELO3C010265 vs. ExPASy TrEMBL
Match: A0A5A7TWK4 (Zinc finger protein ZAT11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001660 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.6e-12
Identity = 47/73 (64.38%), Postives = 55/73 (75.34%), Query Frame = 0

Query: 4   FEASGLCLLQPMFVYEAPTVVLTSPRTQPMPSRSPIRMELIAPSILFRSTLPHQGVLSSP 63
           F+ASGL LLQ         +V+ S RTQ   SRSPI +EL+APSI+ RSTLPHQGVL+SP
Sbjct: 161 FKASGLRLLQ---------LVVASLRTQSPLSRSPICVELVAPSIILRSTLPHQGVLTSP 220

Query: 64  LKKPPSSSSHVPS 77
           LKKP SSS+HVPS
Sbjct: 221 LKKPSSSSNHVPS 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK03645.15.7e-3396.20charged multivesicular body protein 7 isoform X1 [Cucumis melo var. makuwa][more]
KAA0050041.11.2e-3092.41charged multivesicular body protein 7 isoform X1 [Cucumis melo var. makuwa][more]
KAA0062299.12.0e-2278.67pol protein [Cucumis melo var. makuwa][more]
KAA0059932.11.1e-1567.95GPI mannosyltransferase 1-like isoform X1 [Cucumis melo var. makuwa] >TYK24878.1... [more]
KAA0047344.19.4e-1264.38zinc finger protein ZAT11 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BX222.8e-3396.20Charged multivesicular body protein 7 isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
A0A5A7U8W25.7e-3192.41Charged multivesicular body protein 7 isoform X1 OS=Cucumis melo var. makuwa OX=... [more]
A0A5A7V9C39.8e-2378.67Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00450 PE... [more]
A0A5D3DMR15.2e-1667.95GPI mannosyltransferase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A5A7TWK44.6e-1264.38Zinc finger protein ZAT11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010265.1MELO3C010265.1mRNA