MELO3C009303.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C009303.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Isoleucine--tRNA ligase
Location	chr04: 32795812 .. 32798331 (+)
RNA-Seq Expression	MELO3C009303.jh1
Synteny	MELO3C009303.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTGGATGCAGACTAGGGAACGAATTCTTGGTTTCAATCTGGAGTTGGAATCTTTGCCGCGATGCTAGTCGGAACCATAATCGCACCTCGTAGCTTTTTCTCAGGAAACAAACGGAAATCATCTTCGTCCTCATCGTCATTGTCTTCTTCTTCGCCGGTGATTCCTCTGTGTTCGGGGAGAAGGCCTAAAGATCCTCGAAAAGATGACGATAATGACGATCAGACACGTATGGCATCGGTATCCTTTTCTCTCTTTTGCGGATTTTAAGTTCTGCTTCGTTGATGACCTCTCTAGCTTCTTTGGATTTTAGTTTGAGCTGTGAGGGAGAAAAGCAAGAATCAAATAGAACTTTGTTCTAAGTAACTACTCGAAAGGGCTTAGAGGCTCAAAGTAGCTTAGTATTGAAAAATGTTTTTCGTTCTTTTCCCGCCTTTTTGAGTCTGATCGGATGTATTTAGAACGGAGTTACATTTTGGTGCTGAGATCTAGATTTATGTATTGTCTAAAATTAGATTTAGGACTTCATTTCATCTGTTTTTGAGTACTAGTTAGTTGCCGATGAAGGTCTTTAACTTGATCTCTTGTTGACAAAAGCATAATGCGTCCAAATTACAGGGAAAATTCATTTGGCGTATAAAAAATTGACGAACAATTTTCTTCTTAATGTCTTGACTACGGGCATCGAAAAATCAATAGGTTTCCATCTCTAGAACGAACAAAAATATGATAATGCTTTTGATCAAATTGCTTTTCAATGGGTTAAATATGTTTTAGCTTTATAATGCTCTTAATCGCTCAGATAAAGGCATGTTACTTTCAATTTGCACTTTAGAGAAGCTGCTGATTCTTCTTAATATAACTTGGCACGCTGCACAACAGCATTTCTTCTGTACCCTTCATTTTGGATAGTTGCTTACTCAAGATTAAGGAGGCATTTGGGGCATTGAGTTGATTAATATAGTGAGTGGTTTTTATAGCTTGTGGGTTATAATAATGTCTGTCTAAGGTGCAAACTATTTAGTACGAGTTGTAATAGTCCAATAAGAAATAGTAAATAGGGTAACGAGAGAGATTTTAAATAGTATGATTATAGTTAATTATGAGTTATAATAGTTGAAAACACAAACTATTATAATTGGAGGTTCAAGCACGGAATGAGCTATAATAGTCCGCTCTGTCCAATTGAAGTTGGGGGGCAAACGGTCCCTAAGAGTTACATGTCCCAGTCCTAGCATCTCAAGCAAGATCATTTGGTTCCTAAAGAAGAGATAAAATCAGGTATTATTTTTAGTATGACCAGCTCGCTTTTGAAGCACTAGATTCTCAAGAGAAGTCTAGGATTCATCTACCAATTGTTAGTATTAACTATAACCTGTGTTATAGATCAGTTAGTCTTTTATCAGTCTGTTAGCTATTTACCTAAATAGGTAACTTGTTGTTTATAGTAGTGTGTAATCATATGTACTAATTGGAGTTTTAACTCCTGAAATATAATAAGAATACTTTCCCCTTGGTGTTGGTTAGTAGTGCGGATAAAATCCCTTGTTGATTTTAGGCTAGAAAAAAAATGAAATTCATGGAAAATGCATGAGTTCTATTATCCAAAGTGGACAATATCATACCACTGTGAATATATGTAGAGGTTTGATTGCCCTTAGTATAAGTTGGTTTATATCTAGTTTGTAACTTTGAGTTTTTTTCTTAAAAAAAGTGTAAAAGAGTTTTTGGATTCTTTGTTCTCTCCGAGTTTAATTTGAAGAAAGCATGAACTTTAAATTATGTTAAGTTATAAACTTAGAAAATTGAATTCAAGACTTGAAGGGTATGTTCGAACATCCCAAGCCCTTGAATTAGGACACCATTGAGAGTAACTAACTCAAGTGCTTCTATTTTGTAAGCTGATTATTTGAAAATTTTCAATATCAAATGTAGGATCAAGTTTATATTTAGCATTAAGGCTAACAATTATTGTTTGAATTACCAATAATGTGAATCAGGTGATAAGCTCTCAACAGACTGGGACAAGGCATGGTCCAAGTTCAAAAAGCGAGGAAAAAAGACGATATTCTCTGATTTCTCTCCCGACAAATATGTAAGCTGGAATCCGCGAAGGTCAGAATATCCATTATCTGAAGAAGTAGATCCCATTAAAAGAACAGAGAGATCAAACCTGATGCTGTGGACTAGTCCAAGATTTACTCTAGCAGGTGCAATTGTAATTATCATATTCTTGTTGGTCTACACCATTCTTGCACCAATTAATAAGTGATTTTTGTTGCTGTGTTGAACTTTCTTCTTATATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTAATGATGTTTATGATTGTAGAAAGGTTTGTAAATTTGTATGGAAATTCAATGGAATGTGTGCTTTGTGTTTTGCTTGCTTTCTATGGGAAGATGCCATACCTTGCACTAGCTAATGCATGTTATGATTTGCTTTCTAGTCTTCATAAATTAAAATTTATAACACTTCAATCCTTCTTGTGAAA

mRNA sequence

CAGTGGATGCAGACTAGGGAACGAATTCTTGGTTTCAATCTGGAGTTGGAATCTTTGCCGCGATGCTAGTCGGAACCATAATCGCACCTCGTAGCTTTTTCTCAGGAAACAAACGGAAATCATCTTCGTCCTCATCGTCATTGTCTTCTTCTTCGCCGGTGATTCCTCTGTGTTCGGGGAGAAGGCCTAAAGATCCTCGAAAAGATGACGATAATGACGATCAGACACGTGATAAGCTCTCAACAGACTGGGACAAGGCATGGTCCAAGTTCAAAAAGCGAGGAAAAAAGACGATATTCTCTGATTTCTCTCCCGACAAATATGTAAGCTGGAATCCGCGAAGGTCAGAATATCCATTATCTGAAGAAGTAGATCCCATTAAAAGAACAGAGAGATCAAACCTGATGCTGTGGACTAGTCCAAGATTTACTCTAGCAGGTGCAATTGTAATTATCATATTCTTGTTGGTCTACACCATTCTTGCACCAATTAATAAGTGATTTTTGTTGCTGTGTTGAACTTTCTTCTTATATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTAATGATGTTTATGATTGTAGAAAGGTTTGTAAATTTGTATGGAAATTCAATGGAATGTGTGCTTTGTGTTTTGCTTGCTTTCTATGGGAAGATGCCATACCTTGCACTAGCTAATGCATGTTATGATTTGCTTTCTAGTCTTCATAAATTAAAATTTATAACACTTCAATCCTTCTTGTGAAA

Coding sequence (CDS)

ATGCTAGTCGGAACCATAATCGCACCTCGTAGCTTTTTCTCAGGAAACAAACGGAAATCATCTTCGTCCTCATCGTCATTGTCTTCTTCTTCGCCGGTGATTCCTCTGTGTTCGGGGAGAAGGCCTAAAGATCCTCGAAAAGATGACGATAATGACGATCAGACACGTGATAAGCTCTCAACAGACTGGGACAAGGCATGGTCCAAGTTCAAAAAGCGAGGAAAAAAGACGATATTCTCTGATTTCTCTCCCGACAAATATGTAAGCTGGAATCCGCGAAGGTCAGAATATCCATTATCTGAAGAAGTAGATCCCATTAAAAGAACAGAGAGATCAAACCTGATGCTGTGGACTAGTCCAAGATTTACTCTAGCAGGTGCAATTGTAATTATCATATTCTTGTTGGTCTACACCATTCTTGCACCAATTAATAAGTGA

Protein sequence

MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIIIFLLVYTILAPINK

Homology

[Close]

BLAST of MELO3C009303.jh1 vs. NCBI nr
Match: XP_008442626.1 (PREDICTED: uncharacterized protein LOC103486442 [Cucumis melo])

HSP 1 Score: 281 bits (719), Expect = 2.64e-95
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVIIIFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIIIFLLVYTILAPINK 145

[Close]

BLAST of MELO3C009303.jh1 vs. NCBI nr
Match: XP_038906326.1 (uncharacterized protein LOC120092168 [Benincasa hispida])

HSP 1 Score: 267 bits (683), Expect = 8.15e-90
Identity = 136/145 (93.79%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           ML+GTIIAPRSFFS NK+KSSSSSSS SSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKKTIFSDFSP+KYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 145

[Close]

BLAST of MELO3C009303.jh1 vs. NCBI nr
Match: XP_004137799.1 (uncharacterized protein LOC101211971 [Cucumis sativus] >KGN58925.1 hypothetical protein Csa_002393 [Cucumis sativus])

HSP 1 Score: 265 bits (677), Expect = 6.70e-89
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           MLVGTIIAPRSFFS NK+KS SS SS SSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSRNKQKSPSSLSSSSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFKKRGKKT+FSDFSP+KYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVII FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIITFLLVYTILAPINK 145

[Close]

BLAST of MELO3C009303.jh1 vs. NCBI nr
Match: XP_022145494.1 (uncharacterized protein LOC111014931 [Momordica charantia])

HSP 1 Score: 249 bits (636), Expect = 1.85e-82
Identity = 130/150 (86.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 3   VGTIIAPRSFFSGNKRKSSSSSSSLSSSS-------PVIPLCSGRRPKDPRKDDDNDDQT 62
           +GTIIAP SFFS NK+KSSSS SS SSSS       PV+PLC GRRPKDP KDDDNDDQT
Sbjct: 9   IGTIIAPHSFFSRNKQKSSSSPSSSSSSSSSVYNCSPVVPLCLGRRPKDPPKDDDNDDQT 68

Query: 63  RDKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM 122
           RDK STDWDKAWSKF+KRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM
Sbjct: 69  RDKFSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM 128

Query: 123 LWTSPRFTLAGAIVIIIFLLVYTILAPINK 145
           LWTSPRFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 129 LWTSPRFTLAGAIVIVTFLLVYTILAPINK 158

[Close]

BLAST of MELO3C009303.jh1 vs. NCBI nr
Match: XP_022983966.1 (uncharacterized protein LOC111482428 [Cucurbita maxima])

HSP 1 Score: 248 bits (633), Expect = 3.20e-82
Identity = 127/145 (87.59%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           ML+GT+IAPR FFS NK+KSS+SS    SSSPV+PLCSGRRP+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKQKSSASSPF--SSSPVVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKKTIFSDFSP+KYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]

BLAST of MELO3C009303.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B6W3 (uncharacterized protein LOC103486442 OS=Cucumis melo OX=3656 GN=LOC103486442 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 1.28e-95
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVIIIFLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIIIFLLVYTILAPINK 145

[Close]

BLAST of MELO3C009303.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LAB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736730 PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 3.24e-89
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           MLVGTIIAPRSFFS NK+KS SS SS SSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS
Sbjct: 1   MLVGTIIAPRSFFSRNKQKSPSSLSSSSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKFKKRGKKT+FSDFSP+KYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVII FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIITFLLVYTILAPINK 145

[Close]

BLAST of MELO3C009303.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CVE7 (uncharacterized protein LOC111014931 OS=Momordica charantia OX=3673 GN=LOC111014931 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 8.96e-83
Identity = 130/150 (86.67%), Postives = 135/150 (90.00%), Query Frame = 0


Query: 3   VGTIIAPRSFFSGNKRKSSSSSSSLSSSS-------PVIPLCSGRRPKDPRKDDDNDDQT 62
           +GTIIAP SFFS NK+KSSSS SS SSSS       PV+PLC GRRPKDP KDDDNDDQT
Sbjct: 9   IGTIIAPHSFFSRNKQKSSSSPSSSSSSSSSVYNCSPVVPLCLGRRPKDPPKDDDNDDQT 68

Query: 63  RDKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM 122
           RDK STDWDKAWSKF+KRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM
Sbjct: 69  RDKFSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLM 128

Query: 123 LWTSPRFTLAGAIVIIIFLLVYTILAPINK 145
           LWTSPRFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 129 LWTSPRFTLAGAIVIVTFLLVYTILAPINK 158

[Close]

BLAST of MELO3C009303.jh1 vs. ExPASy TrEMBL
Match: A0A6J1J3V4 (uncharacterized protein LOC111482428 OS=Cucurbita maxima OX=3661 GN=LOC111482428 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 1.55e-82
Identity = 127/145 (87.59%), Postives = 136/145 (93.79%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           ML+GT+IAPR FFS NK+KSS+SS    SSSPV+PLCSGRRP+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKQKSSASSPF--SSSPVVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKKTIFSDFSP+KYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]

BLAST of MELO3C009303.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F162 (uncharacterized protein LOC111441439 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441439 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 6.31e-82
Identity = 126/145 (86.90%), Postives = 135/145 (93.10%), Query Frame = 0


Query: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSSSPVIPLCSGRRPKDPRKDDDNDDQTRDKLS 60
           ML+GT+IAPR FFS NK KSS+SS S  SSSP +PLCSGRRP+DPRKDDDNDDQ RDK S
Sbjct: 1   MLIGTVIAPRYFFSRNKLKSSASSPS--SSSPAVPLCSGRRPRDPRKDDDNDDQKRDKPS 60

Query: 61  TDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKRTERSNLMLWTSP 120
           TDWDKAWSKF+KRGKKTIFSDFSP+KYVSWNPRRS+YPLSEEVDPIKRTERSNLMLWTSP
Sbjct: 61  TDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSP 120

Query: 121 RFTLAGAIVIIIFLLVYTILAPINK 145
           RFTLAGAIVI+ FLLVYTILAPINK
Sbjct: 121 RFTLAGAIVIVTFLLVYTILAPINK 143

[Close]

BLAST of MELO3C009303.jh1 vs. TAIR 10
Match: AT3G53470.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-35
Identity = 74/107 (69.16%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 37  CSGRRPKDPRKDDDNDDQTRDKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSE 96
           CS   P  PRK ++++    DK STDWDKAW  FKK+ KK++FS F+ DKYV+WNP RSE
Sbjct: 30  CSNNEP--PRKGNESNGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRSE 89

Query: 97  YPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIIIFLLVYTILAPI 144
           + LSEEVDPIKRTERSNLMLWTSPRFTL GAIVI+ FLL+YTILAP+
Sbjct: 90  FDLSEEVDPIKRTERSNLMLWTSPRFTLVGAIVIVSFLLLYTILAPV 134

[Close]

BLAST of MELO3C009303.jh1 vs. TAIR 10
Match: AT3G53470.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 75/108 (69.44%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 37  CSGRRPKDPRK-DDDNDDQTRDKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRS 96
           CS   P  PRK ++ N     DK STDWDKAW  FKK+ KK++FS F+ DKYV+WNP RS
Sbjct: 30  CSNNEP--PRKGNESNAGGGGDKASTDWDKAWKNFKKQSKKSLFSQFNVDKYVTWNPPRS 89

Query: 97  EYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIIIFLLVYTILAPI 144
           E+ LSEEVDPIKRTERSNLMLWTSPRFTL GAIVI+ FLL+YTILAP+
Sbjct: 90  EFDLSEEVDPIKRTERSNLMLWTSPRFTLVGAIVIVSFLLLYTILAPV 135

The following BLAST results are available for this feature:

BLAST of MELO3C009303.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442626.1	2.64e-95	100.00	PREDICTED: uncharacterized protein LOC103486442 [Cucumis melo]	[more]
XP_038906326.1	8.15e-90	93.79	uncharacterized protein LOC120092168 [Benincasa hispida]	[more]
XP_004137799.1	6.70e-89	94.48	uncharacterized protein LOC101211971 [Cucumis sativus] >KGN58925.1 hypothetical ...	[more]
XP_022145494.1	1.85e-82	86.67	uncharacterized protein LOC111014931 [Momordica charantia]	[more]
XP_022983966.1	3.20e-82	87.59	uncharacterized protein LOC111482428 [Cucurbita maxima]	[more]

BLAST of MELO3C009303.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C009303.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B6W3	1.28e-95	100.00	uncharacterized protein LOC103486442 OS=Cucumis melo OX=3656 GN=LOC103486442 PE=...	[more]
A0A0A0LAB4	3.24e-89	94.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736730 PE=4 SV=1	[more]
A0A6J1CVE7	8.96e-83	86.67	uncharacterized protein LOC111014931 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1J3V4	1.55e-82	87.59	uncharacterized protein LOC111482428 OS=Cucurbita maxima OX=3661 GN=LOC111482428...	[more]
A0A6J1F162	6.31e-82	86.90	uncharacterized protein LOC111441439 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MELO3C009303.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53470.1	2.4e-35	69.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53470.2	2.6e-34	69.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..59
None	No IPR available	PANTHER	PTHR36043	2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE	coord: 16..143
None	No IPR available	PANTHER	PTHR36043:SF1	2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE	coord: 16..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009303.jh1.t1	MELO3C009303.jh1.t1	mRNA