MELO3C008755 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTCTGACGACATAATGGGCACACAACCCGAACGTGCAAGTGATGGTAGGAATGCTTCAAACGGATCGAAGAGGAAGCAGGGAAGCCAGCCAGTAGAAACTACGAAAATCATTCGTAGTGCCATGGAATACGCCAATAACCATCTTAACCACATTGCAGACTGGTCGATCATACAACGCCAAGATGCAAGCGTAACATGGCAAGAGGTGTCGTTCTACAGTTACAGGGAATCCTCGAACTGA ATGTCGTCTGACGACATAATGGGCACACAACCCGAACGTGCAAGTGATGGTAGGAATGCTTCAAACGGATCGAAGAGGAAGCAGGGAAGCCAGCCAGTAGAAACTACGAAAATCATTCGTAGTGCCATGGAATACGCCAATAACCATCTTAACCACATTGCAGACTGGTCGATCATACAACGCCAAGATGCAAGCGTAACATGGCAAGAGGTGTCGTTCTACAGTTACAGGGAATCCTCGAACTGA ATGTCGTCTGACGACATAATGGGCACACAACCCGAACGTGCAAGTGATGGTAGGAATGCTTCAAACGGATCGAAGAGGAAGCAGGGAAGCCAGCCAGTAGAAACTACGAAAATCATTCGTAGTGCCATGGAATACGCCAATAACCATCTTAACCACATTGCAGACTGGTCGATCATACAACGCCAAGATGCAAGCGTAACATGGCAAGAGGTGTCGTTCTACAGTTACAGGGAATCCTCGAACTGA MSSDDIMGTQPERASDGRNASNGSKRKQGSQPVETTKIIRSAMEYANNHLNHIADWSIIQRQDASVTWQEVSFYSYRESSN Homology
BLAST of MELO3C008755 vs. NCBI nr
Match: TYK08370.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 3.3e-36 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of MELO3C008755 vs. NCBI nr
Match: KAA0047716.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 3.3e-36 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of MELO3C008755 vs. NCBI nr
Match: KAA0042367.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15486.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of MELO3C008755 vs. NCBI nr
Match: KAA0060529.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK00769.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
BLAST of MELO3C008755 vs. NCBI nr
Match: KAA0036791.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ95858.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 77.4 bits (189), Expect = 6.3e-11 Identity = 37/71 (52.11%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of MELO3C008755 vs. ExPASy TrEMBL
Match: A0A5D3CAJ4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001830 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of MELO3C008755 vs. ExPASy TrEMBL
Match: A0A5A7U0G0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G002300 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.6e-36 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of MELO3C008755 vs. ExPASy TrEMBL
Match: A0A5A7TKY0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00690 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.2e-13 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of MELO3C008755 vs. ExPASy TrEMBL
Match: A0A5A7V469 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00340 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.4e-13 Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
BLAST of MELO3C008755 vs. ExPASy TrEMBL
Match: A0A5D3C2D3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00220 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11 Identity = 40/71 (56.34%), Postives = 51/71 (71.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|