MELO3C007465.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.CGTGCAGTTTCCTTAGGTTTTTGTATGAAGGTAAAAAAAAGTCCAAAAATAAATAAAATAAAAATCCAGGTAACCGTTCGGCTCTTCGGCAGAAGAAATGGCTTCAACTTCAACTTCAGCTTTCTCAGTTTCTTCTCAAATTGAACTTCCCGGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAACTTTCGATTTAGCATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTATTCACCGAAAATTTTTCATTCCCCCATTCACAATACCCTCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTCTACCTCACCCCAGATAAAACTTTCGAAGTATATCGTTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATTTAAGATATGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCCGAAAAAGCTCAAATTCCAGAGGGGGATAGTGAAGAGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGACTTTTGTTGGCTCTTTGTTATGAGACATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCACGTAAGGTTTTTGCTCAACCGTGTGATATGAAAATAGATTTATGTTTCAATAGACTGATAGTCTTGGTTTTAATGTCATTTGGTGCAAATGTTAGATGAAGTTGTTATTTGTGTACTAAACCAATGTGATGTTTACATTAGAAATTGTTTTGGAAAAAATTGAAAGTAATGTTAAGACATCAGTTTTTGAGCAAGAACTGCTAGGAAATGACTTCTATGAGAATAGTTGATGTGGTTTTTTCCGCTCTATGATTTCTAGTTCTCCTTATAATTTAAGCATTGGTTTCTTTTCATTATATCAATGAAAAGTTTTGTTTCCAATTAAAAAGAAGTTGATATGACTTTTACCCTAAAGTTTTATTTGAACTTGAATTATTACATCATGCTGGCTAAATTTTCTGAAGGTATTGTAGTTGTGAAGGCAATTTTTGTTCTTCAGTCCTATTCATGTTATTCAAGCATGATGTAAGATATTGTCTTAGAAATCTTTTAACTTCTCAAGGGAAGATACTAACTAACATGTTAGTATGTAATAAAAACTTCAATATTGTCATCTCGTCTGTGGGCTGCCTTGCTAGTATGAAGCTGCAACCTTTTATGGCTTTTCTAAATGTTTTTAATAAGGTAAGTCAATGCTTAATTTGAAACTTTCAATTTGCACTTTCTTCAGGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCGCTAGATATTGCTCGTGATGAGAAAAAACTTGCCGAACATAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCATTTGCTACTTAGGACATGTTTGGATTGACTTTCTAAGTGCTTAATAAATACTTTTTCTTCAACTTAACACTTTTTCAATATTTAGAACGTCATTCAAATAGGCTCTTGTGTCTTCCCTGTTTGAAAATGTAACTTTTTGGTTGAGTCCATATTTTTCTTTCTCACTATGTTCAACCCTTGGGGATTTCCTGCTTCTTACACTGTATCCATCTAGTAGAAGGGTGCAAATGTTTGGATGCCTAGCATTGGAAAATTATTTGTCTAACTGGCTGTTATATGCATTTGAATTACTCCAAAAAGTTGTTGAGACTAAAGTTATGAAAGACTGGATTGTACATTGACAAGTACCAGATAAAAAAAATGTCATTATGTATTCCTATTTTTAAGGTCTAGGTGGTATAATCCTCAGTGTTCTAAGGTTGCTTTCATTTTTGTTAATTATGCTGTTTTGTGGAAAAGGCGTAAAGCTAAGACTTTGCCAGTCAACACAGATTGCTTGAAATGCTAGAGAGAAATCACATAACTTTTATGGAAATGTGGAGATGGCAATGGCAATTTAGATCTGGCTTGTTATGTGGCCTCTAGATAAAGTTCCTTCTCTTGCCTTTCTAAATTTCTTTTTTTTTATTAATTGATTACCAATTCTTGAACTTTTCTGTTATTATTTTGAATCTTTAAGCATTTGAGAATTTCTAATTTTCCACCTTAATGCTCCGGATTCTTGTCCAACAACGTAGTTTGGCTTTCAGGGGGAACTGGAAGAGGGTTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGTTCTGACATAATCTTCAGACTACCTATCTTTTTTATCATAATTTTGGATTAGTCCATTTCCACACTGCATGTCTAATGACTCAGCGAGTCAGCGTACTAGGGCACTCATGTGTCACGTTAATATGGAGGAAACTATACTTTTTCTTTGTCAAGAACTGGTATGAATGTTCTGAGATTGTTGGCATTCATTTCAACTAAATGAACTGCACCAAAGATATGGTTGTCTGTATTTGAAACATTTATAATTAATGTTATGGGTTTGATTCAACTGAATAATATGAATAGAGAATTGATGAGTGGGAAAAGTAAGATGAAAATGAAAGTAGGATTTAGCCAAGCATCACAATTCGCATAGTAAGAAAAATATGATCATTTAGCTTATTGAAGAGGAAATTTTTCTTTGGGGGAAAGGATGAAATACTGAAATGAAAGATATCTAACTATATGCATTTCTTTCTTGCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAATATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATCGATGACATTATGTTGTCGGCTACGACTGCATCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGAAGCCAAGAAGAAAAGGGTTCTCTGGTTATTAGTTTGAGAGTTTATAGAATGGGTCCATACCACTGCCAACACACCTGACCACTAAAACTCTGTAGTTAACCGTGCTTGTGCCATGTCGGGCAAACAAAAGTTGTTGAGGGTGATCGGTAACGTTGGTAGTGAAATCTGGTTGTAATGGCTAAAATAGAAACTATGGATTCGTATTGGCTGTTTGATAAGAACGAACAAGAAAGACTGCACGCACTGGAGCGGTAAGTAGGAATGGAGATTATCTGGAGCTGTTTTTATCAGTGCAGTGGAGTAATGGTTGGTTCAAAATAGTTGCACAAGTTGCATTTGAAGTAGTTCAGCGAGTAAACGGACCTGATTTTTTGCTTTAAACGGACTCTCTCGATCTTTCTCTCTCTCTCTCTCTCACACCGTTCTTTTGAATCTTTTCCATTTATGAGAGTTTTCCATTTATGAGAGTTCTGAGTTATCTTAATCTGGTGTGTCTGAAATTACACCTCGATTTTAATATATACTCGTCAATTCTTGTACATAATCATTTAATTCCTATCATGGAAAGTACTATTATATTTGAACTAATTTATTACA CGTGCAGTTTCCTTAGGTTTTTGTATGAAGGTAAAAAAAAGTCCAAAAATAAATAAAATAAAAATCCAGGTAACCGTTCGGCTCTTCGGCAGAAGAAATGGCTTCAACTTCAACTTCAGCTTTCTCAGTTTCTTCTCAAATTGAACTTCCCGGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAACTTTCGATTTAGCATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTATTCACCGAAAATTTTTCATTCCCCCATTCACAATACCCTCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTCTACCTCACCCCAGATAAAACTTTCGAAGTATATCGTTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATTTAAGATATGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCCGAAAAAGCTCAAATTCCAGAGGGGGATAGTGAAGAGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGACTTTTGTTGGCTCTTTGTTATGAGACATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCACGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCGCTAGATATTGCTCGTGATGAGAAAAAACTTGCCGAACATAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGTTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAATATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATCGATGACATTATGTTGTCGGCTACGACTGCATCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGAAGCCAAGAAGAAAAGGGTTCTCTGGTTATTAGTTTGAGAGTTTATAGAATGGGTCCATACCACTGCCAACACACCTGACCACTAAAACTCTGTAGTTAACCGTGCTTGTGCCATGTCGGGCAAACAAAAGTTGTTGAGGGTGATCGGTAACGTTGGTAGTGAAATCTGGTTGTAATGGCTAAAATAGAAACTATGGATTCGTATTGGCTGTTTGATAAGAACGAACAAGAAAGACTGCACGCACTGGAGCGGTAAGTAGGAATGGAGATTATCTGGAGCTGTTTTTATCAGTGCAGTGGAGTAATGGTTGGTTCAAAATAGTTGCACAAGTTGCATTTGAAGTAGTTCAGCGAGTAAACGGACCTGATTTTTTGCTTTAAACGGACTCTCTCGATCTTTCTCTCTCTCTCTCTCTCACACCGTTCTTTTGAATCTTTTCCATTTATGAGAGTTTTCCATTTATGAGAGTTCTGAGTTATCTTAATCTGGTGTGTCTGAAATTACACCTCGATTTTAATATATACTCGTCAATTCTTGTACATAATCATTTAATTCCTATCATGGAAAGTACTATTATATTTGAACTAATTTATTACA ATGGCTTCAACTTCAACTTCAGCTTTCTCAGTTTCTTCTCAAATTGAACTTCCCGGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAACTTTCGATTTAGCATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTATTCACCGAAAATTTTTCATTCCCCCATTCACAATACCCTCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTCTACCTCACCCCAGATAAAACTTTCGAAGTATATCGTTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATTTAAGATATGCCAGGGCATTGCCTGCTCAGACAAGCAGCAAAAACCCAACATTGGCCGAAAAAGCTCAAATTCCAGAGGGGGATAGTGAAGAGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGGAGGCCATTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGACTTTTGTTGGCTCTTTGTTATGAGACATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCACGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCGCTAGATATTGCTCGTGATGAGAAAAAACTTGCCGAACATAGGAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGTTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAATATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATCGATGACATTATGTTGTCGGCTACGACTGCATCACGGGAACAGTTTCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGA MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYSPKIFHSPIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTSSKNPTLAEKAQIPEGDSEEMWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLIDLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTNKK Homology
BLAST of MELO3C007465.jh1 vs. NCBI nr
Match: XP_008440127.1 (PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo] >TYK12974.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa]) HSP 1 Score: 697 bits (1798), Expect = 1.27e-252 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. NCBI nr
Match: XP_004141968.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical protein Csa_003836 [Cucumis sativus]) HSP 1 Score: 635 bits (1638), Expect = 3.29e-228 Identity = 330/362 (91.16%), Postives = 341/362 (94.20%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. NCBI nr
Match: XP_038880966.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 583 bits (1502), Expect = 1.71e-207 Identity = 311/362 (85.91%), Postives = 331/362 (91.44%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. NCBI nr
Match: XP_022132537.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia]) HSP 1 Score: 506 bits (1304), Expect = 1.69e-177 Identity = 272/361 (75.35%), Postives = 304/361 (84.21%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. NCBI nr
Match: XP_023517290.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497 bits (1279), Expect = 1.03e-173 Identity = 268/357 (75.07%), Postives = 299/357 (83.75%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 8.1e-37 Identity = 97/279 (34.77%), Postives = 158/279 (56.63%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy Swiss-Prot
Match: O06917 (TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0263 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04 Identity = 29/102 (28.43%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy Swiss-Prot
Match: Q58741 (TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1345 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04 Identity = 27/115 (23.48%), Postives = 58/115 (50.43%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CPL4 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005710 PE=4 SV=1) HSP 1 Score: 697 bits (1798), Expect = 6.13e-253 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy TrEMBL
Match: A0A1S3B0E6 (LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484686 PE=4 SV=1) HSP 1 Score: 697 bits (1798), Expect = 6.13e-253 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KHZ0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 PE=4 SV=1) HSP 1 Score: 635 bits (1638), Expect = 1.59e-228 Identity = 330/362 (91.16%), Postives = 341/362 (94.20%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BU39 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005371 PE=4 SV=1) HSP 1 Score: 506 bits (1304), Expect = 8.17e-178 Identity = 272/361 (75.35%), Postives = 304/361 (84.21%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. ExPASy TrEMBL
Match: A0A6J1HF02 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463369 PE=4 SV=1) HSP 1 Score: 496 bits (1276), Expect = 1.43e-173 Identity = 268/357 (75.07%), Postives = 299/357 (83.75%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-80 Identity = 152/286 (53.15%), Postives = 214/286 (74.83%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein ) HSP 1 Score: 156.0 bits (393), Expect = 5.7e-38 Identity = 97/279 (34.77%), Postives = 158/279 (56.63%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37 Identity = 100/287 (34.84%), Postives = 155/287 (54.01%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 153.3 bits (386), Expect = 3.7e-37 Identity = 101/280 (36.07%), Postives = 160/280 (57.14%), Query Frame = 0
BLAST of MELO3C007465.jh1 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 141.4 bits (355), Expect = 1.5e-33 Identity = 74/208 (35.58%), Postives = 130/208 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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