MELO3C004302 (gene) Melon (DHL92) v4

Overview
NameMELO3C004302
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionTMV resistance protein N-like isoform X1
Locationchr05: 26036022 .. 26036650 (-)
RNA-Seq ExpressionMELO3C004302
SyntenyMELO3C004302
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCCACTGGTTGCGAATCGTTGGCTAGAAGTCCTGAGAACTTGGTAGATGTAATATCAGGAAAACAGGTTCATCTCTTTCCATTCAATTGGTTTCTATCTTGTAAACAATTTTATGGATATGCATTCTTATTCTACAGGACCTTACATTGGGTGAGATTTCAAGAGAGTTCTTTCTAACGGGCATTGAGATTCCAGAATGGTTCAGTTATAAGTCTACTACAAATTCTGTGACTGCTAGCATTCGTCACTATCCAGATATGGAAAGGACTTTGGCTGCCTGTGTTAGTTTCACAGTGAATGGAGATTCGTCTACAAGGGGAGCCCTAATTTCATGCAATATATTCATCTGCAATCAACTCTATTGTTCTTTTTCAAGATCATTTCTTCCATCAAAATCAGAGTATATGTGGTTAGTAACAACTTCTCTAGCTCGGGAATCCATGGAGGTGCAGGATTGGAATAAAGTTTTGATCTGGTTTGAAGCACAAGATGAGGTGAATGTAACTATGAGAAGCTGTGGTGTCCATGTCACAGAAGAGCTCCATGGGTTACAAACGGATCTCAACTGGCCGGTGGTAACTTTTGCTGATTTTTATCAACCGGAGAAATTGCCAGATCTGTAA

mRNA sequence

ATGGATGCCACTGGTTGCGAATCGTTGGCTAGAAGTCCTGAGAACTTGGTAGATGTAATATCAGGAAAACAGGACCTTACATTGGGTGAGATTTCAAGAGAGTTCTTTCTAACGGGCATTGAGATTCCAGAATGGTTCAGTTATAAGTCTACTACAAATTCTGTGACTGCTAGCATTCGTCACTATCCAGATATGGAAAGGACTTTGGCTGCCTGTGTTAGTTTCACAGTGAATGGAGATTCGTCTACAAGGGGAGCCCTAATTTCATGCAATATATTCATCTGCAATCAACTCTATTGTTCTTTTTCAAGATCATTTCTTCCATCAAAATCAGAGTATATGTGGTTAGTAACAACTTCTCTAGCTCGGGAATCCATGGAGGTGCAGGATTGGAATAAAGTTTTGATCTGGTTTGAAGCACAAGATGAGGTGAATGTAACTATGAGAAGCTGTGGTGTCCATGTCACAGAAGAGCTCCATGGGTTACAAACGGATCTCAACTGGCCGGTGGTAACTTTTGCTGATTTTTATCAACCGGAGAAATTGCCAGATCTGTAA

Coding sequence (CDS)

ATGGATGCCACTGGTTGCGAATCGTTGGCTAGAAGTCCTGAGAACTTGGTAGATGTAATATCAGGAAAACAGGACCTTACATTGGGTGAGATTTCAAGAGAGTTCTTTCTAACGGGCATTGAGATTCCAGAATGGTTCAGTTATAAGTCTACTACAAATTCTGTGACTGCTAGCATTCGTCACTATCCAGATATGGAAAGGACTTTGGCTGCCTGTGTTAGTTTCACAGTGAATGGAGATTCGTCTACAAGGGGAGCCCTAATTTCATGCAATATATTCATCTGCAATCAACTCTATTGTTCTTTTTCAAGATCATTTCTTCCATCAAAATCAGAGTATATGTGGTTAGTAACAACTTCTCTAGCTCGGGAATCCATGGAGGTGCAGGATTGGAATAAAGTTTTGATCTGGTTTGAAGCACAAGATGAGGTGAATGTAACTATGAGAAGCTGTGGTGTCCATGTCACAGAAGAGCTCCATGGGTTACAAACGGATCTCAACTGGCCGGTGGTAACTTTTGCTGATTTTTATCAACCGGAGAAATTGCCAGATCTGTAA

Protein sequence

MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIRHYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTSLARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPEKLPDL
Homology
BLAST of MELO3C004302 vs. NCBI nr
Match: KAA0063682.1 (TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0

Query: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
           MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60

Query: 61  HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
           HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61  HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120

Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
           LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180

Query: 181 KLPDL 186
           KLPDL
Sbjct: 181 KLPDL 185

BLAST of MELO3C004302 vs. NCBI nr
Match: TYK18345.1 (TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 376.7 bits (966), Expect = 1.1e-100
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0

Query: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
           MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60

Query: 61  HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
           HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61  HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120

Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
           LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180

Query: 181 KLPDL 186
           KLPDL
Sbjct: 181 KLPDL 185

BLAST of MELO3C004302 vs. NCBI nr
Match: XP_008455151.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0

Query: 1    MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
            MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 1006 MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 1065

Query: 61   HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
            HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 1066 HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 1125

Query: 121  LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
            LA  SMEV DWNKVL+WF   EA  EVN T+  CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 1126 LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 1185

Query: 181  QPEKLPDL 186
            Q EKL  L
Sbjct: 1186 QLEKLQSL 1193

BLAST of MELO3C004302 vs. NCBI nr
Match: XP_008455159.1 (PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0

Query: 1    MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
            MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 819  MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 878

Query: 61   HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
            HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 879  HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 938

Query: 121  LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
            LA  SMEV DWNKVL+WF   EA  EVN T+  CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 939  LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 998

Query: 181  QPEKLPDL 186
            Q EKL  L
Sbjct: 999  QLEKLQSL 1006

BLAST of MELO3C004302 vs. NCBI nr
Match: XP_038877835.1 (LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida])

HSP 1 Score: 298.9 bits (764), Expect = 3.0e-77
Identity = 144/188 (76.60%), Postives = 164/188 (87.23%), Query Frame = 0

Query: 1    MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
            +DA+GCESLARSP N+VD+IS KQDLTLGEISREF LT IEIPEWF YK+TTN ++AS R
Sbjct: 978  LDASGCESLARSPNNIVDIISKKQDLTLGEISREFLLTDIEIPEWFGYKTTTNLISASFR 1037

Query: 61   HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
            HYPDMERTLAACV+F VNGDSS R AL+SC+IFICN+L+CSF+R FLPSKSEYMWLVTTS
Sbjct: 1038 HYPDMERTLAACVNFKVNGDSSKRVALVSCSIFICNRLHCSFTRPFLPSKSEYMWLVTTS 1097

Query: 121  LARESMEVQDWNKVLIWFEAQD---EVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
            LA  SMEVQDWNKVL+ FE  +   EVNVT+RS G+HVTEELHG+QTDL WPVV +ADFY
Sbjct: 1098 LAWGSMEVQDWNKVLVRFEVHEEHVEVNVTIRSYGIHVTEELHGMQTDLKWPVVNYADFY 1157

Query: 181  QPEKLPDL 186
            Q EKL +L
Sbjct: 1158 QMEKLQNL 1165

BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match: A0A5D3D473 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00600 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.5e-101
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0

Query: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
           MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60

Query: 61  HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
           HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61  HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120

Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
           LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180

Query: 181 KLPDL 186
           KLPDL
Sbjct: 181 KLPDL 185

BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match: A0A5A7V617 (TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002010 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 5.5e-101
Identity = 182/185 (98.38%), Postives = 184/185 (99.46%), Query Frame = 0

Query: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
           MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR
Sbjct: 1   MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60

Query: 61  HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
           HYPDMERTLAACVSFTVNGDSSTR ALISCNIFICN+LYCSFSRSFLPSKSEYMWLVTTS
Sbjct: 61  HYPDMERTLAACVSFTVNGDSSTRVALISCNIFICNRLYCSFSRSFLPSKSEYMWLVTTS 120

Query: 121 LARESMEVQDWNKVLIWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180
           LARESMEVQDWNKVL+WFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE
Sbjct: 121 LARESMEVQDWNKVLVWFEAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFYQPE 180

Query: 181 KLPDL 186
           KLPDL
Sbjct: 181 KLPDL 185

BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match: A0A1S3C088 (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0

Query: 1    MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
            MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 1006 MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 1065

Query: 61   HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
            HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 1066 HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 1125

Query: 121  LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
            LA  SMEV DWNKVL+WF   EA  EVN T+  CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 1126 LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 1185

Query: 181  QPEKLPDL 186
            Q EKL  L
Sbjct: 1186 QLEKLQSL 1193

BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match: A0A1S3C093 (TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 145/188 (77.13%), Postives = 162/188 (86.17%), Query Frame = 0

Query: 1    MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
            MDA+GCESLAR+P+N+VD+IS KQDLTLGEISREF LTGIEIPEWFSYK+T+N VTAS R
Sbjct: 819  MDASGCESLARNPDNIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTSNLVTASFR 878

Query: 61   HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
            HYPDMERTLAACVSF VNGDSS RGA ISC+IFIC++L+ SFSR FLPSKSEYMWLVTTS
Sbjct: 879  HYPDMERTLAACVSFKVNGDSSKRGAQISCSIFICSKLHSSFSRPFLPSKSEYMWLVTTS 938

Query: 121  LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
            LA  SMEV DWNKVL+WF   EA  EVN T+  CGVHVTEELHG+Q D+ WP+V +ADFY
Sbjct: 939  LAWGSMEVNDWNKVLVWFEVHEAHSEVNATITRCGVHVTEELHGIQMDVKWPMVNYADFY 998

Query: 181  QPEKLPDL 186
            Q EKL  L
Sbjct: 999  QLEKLQSL 1006

BLAST of MELO3C004302 vs. ExPASy TrEMBL
Match: A0A0A0LJM0 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022270 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.0e-75
Identity = 142/188 (75.53%), Postives = 158/188 (84.04%), Query Frame = 0

Query: 1    MDATGCESLARSPENLVDVISGKQDLTLGEISREFFLTGIEIPEWFSYKSTTNSVTASIR 60
            MDA GCESLAR P+N+VD+IS KQDLT+GEISREF LTGIEIPEWFSYK+T+N V+AS R
Sbjct: 941  MDACGCESLARIPDNIVDIISKKQDLTMGEISREFLLTGIEIPEWFSYKTTSNLVSASFR 1000

Query: 61   HYPDMERTLAACVSFTVNGDSSTRGALISCNIFICNQLYCSFSRSFLPSKSEYMWLVTTS 120
            HYPDMERTLAACVSF VNG+SS RGA ISCNIF+CN+LY S SR FLPSKSEYMWLVTTS
Sbjct: 1001 HYPDMERTLAACVSFKVNGNSSERGARISCNIFVCNRLYFSLSRPFLPSKSEYMWLVTTS 1060

Query: 121  LARESMEVQDWNKVLIWF---EAQDEVNVTMRSCGVHVTEELHGLQTDLNWPVVTFADFY 180
            LA  SMEV DWNKVL+WF   EA  EVN T+   GVHVTEELH +QTD+ WP+V +ADFY
Sbjct: 1061 LALGSMEVNDWNKVLVWFEVHEAHSEVNATITRYGVHVTEELHAIQTDVKWPMVNYADFY 1120

Query: 181  QPEKLPDL 186
            Q EKL  L
Sbjct: 1121 QLEKLQSL 1128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0063682.11.1e-10098.38TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa][more]
TYK18345.11.1e-10098.38TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa][more]
XP_008455151.11.4e-7777.13PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
XP_008455159.11.4e-7777.13PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo][more]
XP_038877835.13.0e-7776.60LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D4735.5e-10198.38TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7V6175.5e-10198.38TMV resistance protein N-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3C0886.6e-7877.13TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388... [more]
A0A1S3C0936.6e-7877.13TMV resistance protein N-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495388... [more]
A0A0A0LJM01.0e-7575.53TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022270 PE=4 SV... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004302.1MELO3C004302.1mRNA