MELO3C003720.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C003720.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Exostosin domain-containing protein
Location	chr04: 3432884 .. 3433710 (-)
RNA-Seq Expression	MELO3C003720.jh1
Synteny	MELO3C003720.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCATTGTGCGTGCCTTCTACCCAAAATTTTCTTTCAATTTCTTGTGTCGTCTGTTGTGCGTTGTTGCTTGTCGATTCATCTCGCCGAACGTCTTGCCGAACCTCACCTCGTTTAGTGGTTGTGGCCAAACGCTTTCGTCTTTGGCTGTATTGAGTTCACCGTCCACTGGGATTATTAGTTTGCATTTGCGAAGCCACCATACGTTTCTCAATTCTCCACTTGGAAAATTGGCTGGAAATCAATTCTCGATTCTCCACAAGAGAGGAATTTCATTCTAATACCTCGGTTTCGATAGCGACAGAGGAGGTGGCGACGACGAATGTCTCTGTTCTTTCTTTTTCTTCCTCACCACCACCAGTGAACGACGAAAAGCAAAGTCTTCAACTACACCCAGTGAGATTCTTTTTGTATTTATCATTTTGCATGTAGAAATTTTCAAACACAAGGGTTGGAAACTTTAAGACGAATCAAGATTGATTACTGTTTTTTGTGTTTCGAGATCGAGCTGGTGTTAATGTAGCTAATATGGATGTGTGATGATAATGATAGGAACAAAACATGACAAGAGTCAACGAAGATTTGGGAGAAACGGGGACTGCCATTAATGAAGTGATCAAAAACGTTTCTAATGATAGTAGTTATGAATTAGCGGTGAAAGTGAGAGCAAGAAGACAGAGAGAATATACAAAATTGGAGAGGATTGAAGTAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCTAAGTTCCTTAATCAAACACAAGATCCTGACTTCGTTCCTTCTAGTCCAATGTATTGGAATTCTAAGCATTTCACAGGTTAA

mRNA sequence

ACCCATTGTGCGTGCCTTCTACCCAAAATTTTCTTTCAATTTCTTGTGTCGTCTGTTGTGCGTTGTTGCTTGTCGATTCATCTCGCCGAACGTCTTGCCGAACCTCACCTCGTTTAGTGGTTGTGGCCAAACGCTTTCGTCTTTGGCTGTATTGAGTTCACCGTCCACTGGGATTATTAGTTTGCATTTGCGAAGCCACCATACGTTTCTCAATTCTCCACTTGGAAAATTGGCTGGAAATCAATTCTCGATTCTCCACAAGAGAGGAATTTCATTCTAATACCTCGGTTTCGATAGCGACAGAGGAGGTGGCGACGACGAATGTCTCTGTTCTTTCTTTTTCTTCCTCACCACCACCAGTGAACGACGAAAAGCAAAGTCTTCAACTACACCCAGAACAAAACATGACAAGAGTCAACGAAGATTTGGGAGAAACGGGGACTGCCATTAATGAAGTGATCAAAAACGTTTCTAATGATAGTAGTTATGAATTAGCGGTGAAAGTGAGAGCAAGAAGACAGAGAGAATATACAAAATTGGAGAGGATTGAAGTAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCTAAGTTCCTTAATCAAACACAAGATCCTGACTTCGTTCCTTCTAGTCCAATGTATTGGAATTCTAAGCATTTCACAGGTTAA

Coding sequence (CDS)

ATGACAAGAGTCAACGAAGATTTGGGAGAAACGGGGACTGCCATTAATGAAGTGATCAAAAACGTTTCTAATGATAGTAGTTATGAATTAGCGGTGAAAGTGAGAGCAAGAAGACAGAGAGAATATACAAAATTGGAGAGGATTGAAGTAGGGCTAAGAAGAGCAAGAGCCGCCATTAGAGAAGCTAAGTTCCTTAATCAAACACAAGATCCTGACTTCGTTCCTTCTAGTCCAATGTATTGGAATTCTAAGCATTTCACAGGTTAA

Protein sequence

MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIREAKFLNQTQDPDFVPSSPMYWNSKHFTG

Homology

[Close]

BLAST of MELO3C003720.jh1 vs. NCBI nr
Match: KAA0063322.1 (putative glycosyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 173 bits (439), Expect = 2.03e-54
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 60
          MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR
Sbjct: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 60

Query: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88
          EAKFLNQTQDPDFVPSSPMYWNSKHFTG
Sbjct: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88

[Close]

BLAST of MELO3C003720.jh1 vs. NCBI nr
Match: TYK31454.1 (putative glycosyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 172 bits (435), Expect = 8.28e-54
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 60
          MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYT+LERIEVGLRRARAAIR
Sbjct: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTELERIEVGLRRARAAIR 60

Query: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88
          EAKFLNQTQDPDFVPSSPMYWNSKHFTG
Sbjct: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88

[Close]

BLAST of MELO3C003720.jh1 vs. NCBI nr
Match: KAA0025303.1 (putative glycosyltransferase [Cucumis melo var. makuwa] >TYK07365.1 putative glycosyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (383), Expect = 2.22e-41
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 2   TRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIRE 61
           TRVNEDLGET TAIN VI+NVSNDSSYE AVKVRARRQREYTKLERIE GLRRARAAIRE
Sbjct: 96  TRVNEDLGETATAINGVIRNVSNDSSYESAVKVRARRQREYTKLERIEAGLRRARAAIRE 155

Query: 62  AKFLNQTQDPDFVPSSPMYWNSKHF 86
           AKFLNQTQDPDFVPS PMYWNSK F
Sbjct: 156 AKFLNQTQDPDFVPSGPMYWNSKAF 180

[Close]

BLAST of MELO3C003720.jh1 vs. NCBI nr
Match: XP_008462519.1 (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo])

HSP 1 Score: 152 bits (383), Expect = 2.25e-41
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 2   TRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIRE 61
           TRVNEDLGET TAIN VI+NVSNDSSYE AVKVRARRQREYTKLERIE GLRRARAAIRE
Sbjct: 96  TRVNEDLGETATAINGVIRNVSNDSSYESAVKVRARRQREYTKLERIEAGLRRARAAIRE 155

Query: 62  AKFLNQTQDPDFVPSSPMYWNSKHF 86
           AKFLNQTQDPDFVPS PMYWNSK F
Sbjct: 156 AKFLNQTQDPDFVPSGPMYWNSKAF 180

[Close]

BLAST of MELO3C003720.jh1 vs. NCBI nr
Match: XP_004143371.1 (probable glycosyltransferase At5g03795 [Cucumis sativus] >KGN48221.1 hypothetical protein Csa_003050 [Cucumis sativus])

HSP 1 Score: 149 bits (376), Expect = 2.26e-40
Identity = 76/85 (89.41%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 2   TRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIRE 61
           TRVNEDLGET T INEVI+ VSN+SSYE AVKVRARRQREYTKLERIE GLRRARAAIRE
Sbjct: 95  TRVNEDLGETATTINEVIRKVSNESSYESAVKVRARRQREYTKLERIEAGLRRARAAIRE 154

Query: 62  AKFLNQTQDPDFVPSSPMYWNSKHF 86
           AKFLNQTQDPDFVPS PMYWNSK F
Sbjct: 155 AKFLNQTQDPDFVPSGPMYWNSKAF 179

[Close]

BLAST of MELO3C003720.jh1 vs. ExPASy Swiss-Prot
Match: Q9FFN2 (Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03795 PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 5.2e-06
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 2   TRVNEDLGETGTAIN-EVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 61
           T+V    G+    I   +I   +  ++      +  +++R  + LE+IE  L++ARA+I+
Sbjct: 94  TKVESIQGDYNRTIQLNMINVTATSNNVSSTASLEPKKRRVLSNLEKIEFKLQKARASIK 153

Query: 62  EAKFLNQTQDPDFVPSSPMYWNSKHF 87
            A   +   DPD+VP  PMYWN+K F
Sbjct: 154 AASMDDPVDDPDYVPLGPMYWNAKVF 179

[Close]

BLAST of MELO3C003720.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V4Y8 (Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001480 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 9.84e-55
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 60
          MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR
Sbjct: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 60

Query: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88
          EAKFLNQTQDPDFVPSSPMYWNSKHFTG
Sbjct: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88

[Close]

BLAST of MELO3C003720.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E653 (Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007680 PE=4 SV=1)

HSP 1 Score: 172 bits (435), Expect = 4.01e-54
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 60
          MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYT+LERIEVGLRRARAAIR
Sbjct: 1  MTRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTELERIEVGLRRARAAIR 60

Query: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88
          EAKFLNQTQDPDFVPSSPMYWNSKHFTG
Sbjct: 61 EAKFLNQTQDPDFVPSSPMYWNSKHFTG 88

[Close]

BLAST of MELO3C003720.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C7C8 (Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00850 PE=3 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.07e-41
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 2   TRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIRE 61
           TRVNEDLGET TAIN VI+NVSNDSSYE AVKVRARRQREYTKLERIE GLRRARAAIRE
Sbjct: 96  TRVNEDLGETATAINGVIRNVSNDSSYESAVKVRARRQREYTKLERIEAGLRRARAAIRE 155

Query: 62  AKFLNQTQDPDFVPSSPMYWNSKHF 86
           AKFLNQTQDPDFVPS PMYWNSK F
Sbjct: 156 AKFLNQTQDPDFVPSGPMYWNSKAF 180

[Close]

BLAST of MELO3C003720.jh1 vs. ExPASy TrEMBL
Match: A0A1S3CH59 (probable glycosyltransferase At5g03795 OS=Cucumis melo OX=3656 GN=LOC103500858 PE=3 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.09e-41
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 2   TRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIRE 61
           TRVNEDLGET TAIN VI+NVSNDSSYE AVKVRARRQREYTKLERIE GLRRARAAIRE
Sbjct: 96  TRVNEDLGETATAINGVIRNVSNDSSYESAVKVRARRQREYTKLERIEAGLRRARAAIRE 155

Query: 62  AKFLNQTQDPDFVPSSPMYWNSKHF 86
           AKFLNQTQDPDFVPS PMYWNSK F
Sbjct: 156 AKFLNQTQDPDFVPSGPMYWNSKAF 180

[Close]

BLAST of MELO3C003720.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KKC9 (Exostosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449280 PE=3 SV=1)

HSP 1 Score: 149 bits (376), Expect = 1.09e-40
Identity = 76/85 (89.41%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 2   TRVNEDLGETGTAINEVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIRE 61
           TRVNEDLGET T INEVI+ VSN+SSYE AVKVRARRQREYTKLERIE GLRRARAAIRE
Sbjct: 95  TRVNEDLGETATTINEVIRKVSNESSYESAVKVRARRQREYTKLERIEAGLRRARAAIRE 154

Query: 62  AKFLNQTQDPDFVPSSPMYWNSKHF 86
           AKFLNQTQDPDFVPS PMYWNSK F
Sbjct: 155 AKFLNQTQDPDFVPSGPMYWNSKAF 179

[Close]

BLAST of MELO3C003720.jh1 vs. TAIR 10
Match: AT5G03795.1 (Exostosin family protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.7e-07
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 2   TRVNEDLGETGTAIN-EVIKNVSNDSSYELAVKVRARRQREYTKLERIEVGLRRARAAIR 61
           T+V    G+    I   +I   +  ++      +  +++R  + LE+IE  L++ARA+I+
Sbjct: 94  TKVESIQGDYNRTIQLNMINVTATSNNVSSTASLEPKKRRVLSNLEKIEFKLQKARASIK 153

Query: 62  EAKFLNQTQDPDFVPSSPMYWNSKHF 87
            A   +   DPD+VP  PMYWN+K F
Sbjct: 154 AASMDDPVDDPDYVPLGPMYWNAKVF 179

The following BLAST results are available for this feature:

BLAST of MELO3C003720.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063322.1	2.03e-54	100.00	putative glycosyltransferase [Cucumis melo var. makuwa]	[more]
TYK31454.1	8.28e-54	98.86	putative glycosyltransferase [Cucumis melo var. makuwa]	[more]
KAA0025303.1	2.22e-41	91.76	putative glycosyltransferase [Cucumis melo var. makuwa] >TYK07365.1 putative gly...	[more]
XP_008462519.1	2.25e-41	91.76	PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo]	[more]
XP_004143371.1	2.26e-40	89.41	probable glycosyltransferase At5g03795 [Cucumis sativus] >KGN48221.1 hypothetica...	[more]

BLAST of MELO3C003720.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFN2	5.2e-06	32.56	Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03...	[more]

BLAST of MELO3C003720.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4Y8	9.84e-55	100.00	Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3E653	4.01e-54	98.86	Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3C7C8	1.07e-41	91.76	Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CH59	1.09e-41	91.76	probable glycosyltransferase At5g03795 OS=Cucumis melo OX=3656 GN=LOC103500858 P...	[more]
A0A0A0KKC9	1.09e-40	89.41	Exostosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G449280 P...	[more]

BLAST of MELO3C003720.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03795.1	3.7e-07	32.56	Exostosin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11062:SF206	EXOSTOSIN FAMILY PROTEIN	coord: 31..87
IPR004263	Exostosin-like	PANTHER	PTHR11062	EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED	coord: 31..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C003720.jh1.t1	MELO3C003720.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
molecular_function	GO:0016757	glycosyltransferase activity