MELO3C002252 (gene) Melon (DHL92) v4

Overview


Name	MELO3C002252
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Spermidine synthase 1-like
Location	chr12: 23916762 .. 23919285 (+)
RNA-Seq Expression	MELO3C002252
Synteny	MELO3C002252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCACAATACTCCATCTCTTTAGTTCATCACATTATCTATATCTATATATCTAAATATATATCAAAAATGGCATTTCAAAATGGTGTCTCCTCTTCTCCCATTAAAGCTATGCTCCATGTCCCTACCATTGAGACCAACCGTAATGAACCTATAGAAATCATTTCTTTTTCTCCTATTCAAAATGGCACCCAAAACGGAGTTCAAGATGGGGATTCTTTTTCGCCTGTTTTTCCAGGATGTTACGTCGATATTGCTCCATTCTATCCTGGTACTTTTTTTTAGATAAAATATTATATATTTTGATTATTGAATTCCAAGACTTTTTCAATTTCAGTATCTATACTCTCAGTAAACCTCAAATTTAGTTTCTCAAAACTAATTTTTACTAGAATTTGTTAAATAATAATAAATAACTTTTTAGGCAAGGAAAAATACCATATGTGAATTTGTTTTCAAAATATAGTAAAAATTCTAACAAATAACAAAAAGTTAAGATTTTAAAAAGTATCCACCATAAAATTTAAGATTTATTGAAAGTAAAAGATCAAAATCGGAGATTTCAAAGTTCTATCGATTCACAATTAATTAAAGGGTTAAAAGGGCTAAACTATAATAACTAGTGTTGTTTTTGTTTTTTTTGTTTTTTTTGCATATTATTCATAATCTATGATTATCCACTCTCTAATGATGTAATTTAAATTAATAGAGCAAGGACATGTCTATAAGGTAGAGAAGGTCATATTCAAAGGAAAATCCCAATATCAAGATCTTTTTGTTTTTCAGGTAATTTTTTTCCATTTCCACTTTTTTATTTTACTTTTCTTAATTAATTGTTGTTTTGTTTAATTAATTAATTTTACTAAAGTTTAATTTTTTTTAGACATCAACACATGGGAAGGTTGTTATTTTGGATGGGTCACTTCAACTAACAGAGAAGGATGAATTTGCTTATCAAGAAATGCTCACTCATCTCCCGCTTTGTTCTATTCCCAATCCCAAAAAGGTCATTGTCTTCTTCATATCTATATATATATATATATATATATATATATATCACATAGCTAAAGTTTCTAAGTGTCTACCGAGTTTCATTAACACTTTACCTTATAGGTCTTGCTCATTGGAGGTGGAGATGGAGGGATTCTTCGAGAAGTATCTCGACATGCTTGTGTCGAGCAAATCGACATTTGTGATCTCGACAAAATGGTGATTGATGTAAGCTATACTCCAAAATATGATATGTTTTAGATCAAATCAAAAGTTAAGCTTAGCTTGTATTAAATAAATCCATAAACTTTAAAGACTTAGTTCATCCAAAAATTAAGAATTAATTATGTTTTAAGCTTCAATTTTACTGGATGAAATTATGAAAGAGTAAGTAATATGTAAGGAAAAGAATAATTAGTTAGTGATTAAATATAATGTTGTTTGGTTTAGGTTTACAAGAAGCATTTCCCAGACATTGCTATCGGATACAAGGATCCTCGTGTGAATTCATACATAGGCGACGGTAGGAAACATAGAACTACATGTCGTTTCGAGGATTGTTGTCGTGTTTTTTGTTTGTTAATTTCCGTCTAATTGTCGTAAAGTTTGTTGTTTCAGGTGTGGCCTTCATCAAATCTGTTCCTCCAGCCACCTATGATGCTATCATAATTGATGCATTTCAAGGCATGGGTATGTTATAATTTTTTTAATTTAAATTTTAACGTATAGTTCTGCTCACTATACAAAATGAGAAGTTGAAGCCTATATAATTGAATGTGGATATCAGGGGCTTATGCAACAGAGCTTTCAAACGAAGACATACTTAAATCAATAGCAAAGGCGTTGAAGCCCGGCGGAGTGATGTCGGCTCCGGCCGACAGCATATGGCTGAATAATTTCGCCATGGAAGACACCATAACCCTTTGTCGTAACATCTTCAAAGGCTCTGTAAACTATGCTTGGACCTCTGTTCCTTCATATGCAAGGCAAACCTATCCAAAACGAACCCTATATATTACCCTTTTTTCATTTCCAAACTTCTTGAATTTTTATTTTTATGCACAATCTGCACTTTTCTGATTGGTTTCTTTCCCCTGCTAAATGATCCAAATTCAGTGGCTCCATTGGCTTCATGCTCTGTTCAACTGACGGTCCATCAGTCGACTTCAAACGCCCAGTGAATCCGCTGGATCCAAGTAATTTTGGTGTTGCGAAAGGACCCCCCAAGTTCTACAACTCAGAGGTGGTTTCTTCTTTCTTTTGCTCACAATTATTCATAGGCCCTTATAAATTCCAACTAATTTGGCTGTTTAATTCTGCTGTTTAGATTCATAGTGCAGCGTTTAGTCTTCCTGCATTTGCAAAATCGGCGATGGGTTCCAAATACGCATGATAAACTCGCATGTAAACAAATTATGGTTCTTCAACTGCAGGCTGTAATGTCAAAGTGAAAAAGAGAAACTGATGTTGTCTATTGAACGTTTTGTAATATAAATGAATAACTCATCTATCACAATGGGAGATGTTTGGTTTCA

mRNA sequence

ACTCACAATACTCCATCTCTTTAGTTCATCACATTATCTATATCTATATATCTAAATATATATCAAAAATGGCATTTCAAAATGGTGTCTCCTCTTCTCCCATTAAAGCTATGCTCCATGTCCCTACCATTGAGACCAACCGTAATGAACCTATAGAAATCATTTCTTTTTCTCCTATTCAAAATGGCACCCAAAACGGAGTTCAAGATGGGGATTCTTTTTCGCCTGTTTTTCCAGGATGTTACGTCGATATTGCTCCATTCTATCCTGAGCAAGGACATGTCTATAAGGTAGAGAAGGTCATATTCAAAGGAAAATCCCAATATCAAGATCTTTTTGTTTTTCAGACATCAACACATGGGAAGGTTGTTATTTTGGATGGGTCACTTCAACTAACAGAGAAGGATGAATTTGCTTATCAAGAAATGCTCACTCATCTCCCGCTTTGTTCTATTCCCAATCCCAAAAAGGTCTTGCTCATTGGAGGTGGAGATGGAGGGATTCTTCGAGAAGTATCTCGACATGCTTGTGTCGAGCAAATCGACATTTGTGATCTCGACAAAATGGTTTACAAGAAGCATTTCCCAGACATTGCTATCGGATACAAGGATCCTCGTGTGAATTCATACATAGGCGACGGTGTGGCCTTCATCAAATCTGTTCCTCCAGCCACCTATGATGCTATCATAATTGATGCATTTCAAGGCATGGGGGCTTATGCAACAGAGCTTTCAAACGAAGACATACTTAAATCAATAGCAAAGGCGTTGAAGCCCGGCGGAGTGATGTCGGCTCCGGCCGACAGCATATGGCTGAATAATTTCGCCATGGAAGACACCATAACCCTTTGTCGTAACATCTTCAAAGGCTCTATTCATAGTGCAGCGTTTAGTCTTCCTGCATTTGCAAAATCGGCGATGGGTTCCAAATACGCATGATAAACTCGCATGTAAACAAATTATGGTTCTTCAACTGCAGGCTGTAATGTCAAAGTGAAAAAGAGAAACTGATGTTGTCTATTGAACGTTTTGTAATATAAATGAATAACTCATCTATCACAATGGGAGATGTTTGGTTTCA

Coding sequence (CDS)

ATGGCATTTCAAAATGGTGTCTCCTCTTCTCCCATTAAAGCTATGCTCCATGTCCCTACCATTGAGACCAACCGTAATGAACCTATAGAAATCATTTCTTTTTCTCCTATTCAAAATGGCACCCAAAACGGAGTTCAAGATGGGGATTCTTTTTCGCCTGTTTTTCCAGGATGTTACGTCGATATTGCTCCATTCTATCCTGAGCAAGGACATGTCTATAAGGTAGAGAAGGTCATATTCAAAGGAAAATCCCAATATCAAGATCTTTTTGTTTTTCAGACATCAACACATGGGAAGGTTGTTATTTTGGATGGGTCACTTCAACTAACAGAGAAGGATGAATTTGCTTATCAAGAAATGCTCACTCATCTCCCGCTTTGTTCTATTCCCAATCCCAAAAAGGTCTTGCTCATTGGAGGTGGAGATGGAGGGATTCTTCGAGAAGTATCTCGACATGCTTGTGTCGAGCAAATCGACATTTGTGATCTCGACAAAATGGTTTACAAGAAGCATTTCCCAGACATTGCTATCGGATACAAGGATCCTCGTGTGAATTCATACATAGGCGACGGTGTGGCCTTCATCAAATCTGTTCCTCCAGCCACCTATGATGCTATCATAATTGATGCATTTCAAGGCATGGGGGCTTATGCAACAGAGCTTTCAAACGAAGACATACTTAAATCAATAGCAAAGGCGTTGAAGCCCGGCGGAGTGATGTCGGCTCCGGCCGACAGCATATGGCTGAATAATTTCGCCATGGAAGACACCATAACCCTTTGTCGTAACATCTTCAAAGGCTCTATTCATAGTGCAGCGTTTAGTCTTCCTGCATTTGCAAAATCGGCGATGGGTTCCAAATACGCATGA

Protein sequence

MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVYKKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFSLPAFAKSAMGSKYA

Homology

[Close]

BLAST of MELO3C002252 vs. ExPASy Swiss-Prot
Match: O48658 (Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 9.6e-81
Identity = 141/250 (56.40%), Postives = 192/250 (76.80%), Query Frame = 0


Query: 39  NGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHG 98
           NG  N  ++    S V PG + +I+P +P + H  KVEK++F+GKS YQ++ VFQ+ST+G
Sbjct: 8   NGCSNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYG 67

Query: 99  KVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQI 158
           KV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGGDGG+LREVSRH+ VEQI
Sbjct: 68  KVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQI 127

Query: 159 DICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMG 218
           DIC++DKMV    K+ FPD+A+GY+DPRVN +IGDGVAF+K+VP  TYDA+I+D+   +G
Sbjct: 128 DICEIDKMVVEVAKEFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSDPIG 187

Query: 219 AYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFS 278
             A EL  +   +SIA+AL+PGGV+S  A+SIWL+   +E+ +  CR IFKGS++ A  +
Sbjct: 188 P-AQELFEKPFFESIARALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWTT 247

Query: 279 LPAFAKSAMG 286
           +P +    +G
Sbjct: 248 VPTYPSGMIG 256

[Close]

BLAST of MELO3C002252 vs. ExPASy Swiss-Prot
Match: Q9ZS45 (Spermidine synthase OS=Solanum lycopersicum OX=4081 GN=SPDSYN PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.1e-80
Identity = 143/253 (56.52%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 39  NGTQNGVQDGDS---FSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTS 98
           N + NG +  +S    S V PG + +I+P +P + H  KVEK++F+GKS YQ++ VFQ+S
Sbjct: 32  NNSNNGCEKEESSPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSS 91

Query: 99  THGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACV 158
           T+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGGDGG+LREVSRH+ V
Sbjct: 92  TYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSV 151

Query: 159 EQIDICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQ 218
           EQIDIC++DKMV    K+ FPD+A+GY+DPRVN +IGDGVAF+K+VP  TYDA+I+D+  
Sbjct: 152 EQIDICEIDKMVVEVAKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDAVIVDSSD 211

Query: 219 GMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSA 278
            +G  A EL  +   +SIAKAL+PGGV+S  A+SIWL+   +E+ +  CR IFKGS++ A
Sbjct: 212 PIGP-AQELFEKPFFESIAKALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYA 271

Query: 279 AFSLPAFAKSAMG 286
             ++P +    +G
Sbjct: 272 WTTVPTYPSGMIG 283

[Close]

BLAST of MELO3C002252 vs. ExPASy Swiss-Prot
Match: Q96557 (Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 6.2e-80
Identity = 141/260 (54.23%), Postives = 197/260 (75.77%), Query Frame = 0


Query: 29  IEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQD 88
           +E+ + +   NG  N  ++    S V PG + +I+P +P + H  KVEK++F+GKS YQD
Sbjct: 1   MEVANHNNNNNGCTND-KESPCISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQD 60

Query: 89  LFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE 148
           + VFQ++T+GKV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGGDGG+LRE
Sbjct: 61  VMVFQSTTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLRE 120

Query: 149 VSRHACVEQIDICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDA 208
           VSRH+ VEQIDIC++DKMV    K+ FPD+A+GY+DPRVN +IGDGVAF+K+VP  TYDA
Sbjct: 121 VSRHSSVEQIDICEIDKMVVEVAKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVPAGTYDA 180

Query: 209 IIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIF 268
           +I+D+   +G  A EL  +   ++IA+AL+PGGV+S  A+SIWL+   +E+ +  CR IF
Sbjct: 181 VIVDSSDPIGP-AQELFEKPFFETIARALRPGGVVSTQAESIWLHMHIIEEIVANCREIF 240

Query: 269 KGSIHSAAFSLPAFAKSAMG 286
           KGS++ A  ++P +    +G
Sbjct: 241 KGSVNYAWTTVPTYPSGMIG 258

[Close]

BLAST of MELO3C002252 vs. ExPASy Swiss-Prot
Match: O48660 (Spermidine synthase OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.6e-78
Identity = 139/251 (55.38%), Postives = 189/251 (75.30%), Query Frame = 0


Query: 39  NGTQNG-VQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTH 98
           N   NG   +    S V PG + +I+P +P + H  KVEK++F+GKS YQ++ VFQ+ST+
Sbjct: 5   NHNNNGCTNESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTY 64

Query: 99  GKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQ 158
           GKV++LDG +QLTE+DE AYQEM+ HLPLCSIPNPKKVL+IGGGDGG+LREVSRH+ VEQ
Sbjct: 65  GKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQ 124

Query: 159 IDICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGM 218
           IDIC++DKMV    K+ FPD+A+GY+DPRVN +IGDGVAF+K+V   TYDA+I+D+   +
Sbjct: 125 IDICEIDKMVVEVSKQFFPDVAVGYEDPRVNLHIGDGVAFLKNVAAGTYDAVIVDSSDPI 184

Query: 219 GAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAF 278
           G  A EL  +   +SIA+AL+PGGV+S  A+SIWL+   +E+ +  CR IFKGS++ A  
Sbjct: 185 GP-AQELFEKPFFESIARALRPGGVVSTQAESIWLHMHIIEEIVANCRQIFKGSVNYAWT 244

Query: 279 SLPAFAKSAMG 286
           ++P +    +G
Sbjct: 245 TVPTYPSGMIG 254

[Close]

BLAST of MELO3C002252 vs. ExPASy Swiss-Prot
Match: Q9ZUB3 (Spermidine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=SPDSYN1 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.6e-78
Identity = 138/250 (55.20%), Postives = 191/250 (76.40%), Query Frame = 0


Query: 41  TQNGVQDGD--SFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHG 100
           T+NG Q  +   FS V PG + +++P +P + H  KVEKV+F+GKS YQD+ VFQ++T+G
Sbjct: 28  TENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYG 87

Query: 101 KVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQI 160
           KV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGGDGG+LREV+RHA +EQI
Sbjct: 88  KVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQI 147

Query: 161 DICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMG 220
           D+C++DKMV    K+ FPD+AIGY+DPRVN  IGDGVAF+K+    +YDA+I+D+   +G
Sbjct: 148 DMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIG 207

Query: 221 AYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFS 280
             A EL  +   +S+A+AL+PGGV+   A+S+WL+   +ED ++ CR IFKGS++ A  S
Sbjct: 208 P-AKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTS 267

Query: 281 LPAFAKSAMG 286
           +P +    +G
Sbjct: 268 VPTYPSGVIG 276

[Close]

BLAST of MELO3C002252 vs. NCBI nr
Match: TYJ99147.1 (spermidine synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 558.1 bits (1437), Expect = 4.3e-155
Identity = 282/313 (90.10%), Postives = 284/313 (90.73%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM
Sbjct: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAI 180
           LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM   VYKKHFPDIAI
Sbjct: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAI 180

Query: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240
           GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG
Sbjct: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240

Query: 241 GVMSAPADSIWLNNFAMEDTITLCRN---------------------IFKGSIHSAAFSL 290
           GVMSAPADSIWLNNFAMEDTITLC +                      +   IHSAAFSL
Sbjct: 241 GVMSAPADSIWLNNFAMEDTITLCLDFKRPVNPLDPSNFGVAKGPPKFYNSEIHSAAFSL 300

[Close]

BLAST of MELO3C002252 vs. NCBI nr
Match: KAA0055218.1 (spermidine synthase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147
Identity = 274/313 (87.54%), Postives = 277/313 (88.50%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQ      VVILDGSLQLTEKDEFAYQEM
Sbjct: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQ------VVILDGSLQLTEKDEFAYQEM 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAI 180
           LTHLPLCSI NPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM   VYKKHFPDIAI
Sbjct: 121 LTHLPLCSILNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAI 180

Query: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240
           GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG
Sbjct: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240

Query: 241 GVMSAPADSIWLNNFAMEDTITLCRN---------------------IFKGSIHSAAFSL 290
           GVMSAPADSIWLNNFAMEDTITLC +                      +   IH+AAFSL
Sbjct: 241 GVMSAPADSIWLNNFAMEDTITLCLDFKRPVNPLDPSNFGVAKGPPKFYNSEIHTAAFSL 300

[Close]

BLAST of MELO3C002252 vs. NCBI nr
Match: XP_008446082.2 (PREDICTED: spermidine synthase 1-like [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 3.3e-147
Identity = 275/333 (82.58%), Postives = 275/333 (82.58%), Query Frame = 0


Query: 15  MLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYK 74
           MLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYK
Sbjct: 1   MLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYK 60

Query: 75  VEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKK 134
           VEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKK
Sbjct: 61  VEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKK 120

Query: 135 VLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAIGYKDPRVNSYIGDG 194
           VLLIGGGDGGILREVSRHACVEQIDICDLDKM   VYKKHFPDIAIGYKDPRVNSYIGDG
Sbjct: 121 VLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPRVNSYIGDG 180

Query: 195 VAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNN 254
           VAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNN
Sbjct: 181 VAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNN 240

Query: 255 FAMEDTITLCRNIFKGS------------------------------------------- 290
           FAMEDTITLCRNIFKGS                                           
Sbjct: 241 FAMEDTITLCRNIFKGSVNYAWTSVPSYASGSIGFMLCSTDGPSVDFKRPVNPLDPSNFG 300

[Close]

BLAST of MELO3C002252 vs. NCBI nr
Match: XP_038893662.1 (spermidine synthase 2-like [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 3.0e-132
Identity = 254/350 (72.57%), Postives = 268/350 (76.57%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDG----DSFSPVFP 60
           M FQNGVSSS  KA LHVPTI T+ NE ++IISFSPIQNGT NG Q+G     SFSPVFP
Sbjct: 1   MTFQNGVSSS-TKAQLHVPTIGTDHNELVKIISFSPIQNGTHNGTQNGAQNETSFSPVFP 60

Query: 61  GCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFA 120
           GCYVDIAP YPE+ HVYK+EKVIFKGKSQYQDLFVFQ+ THGKVVILDGSLQLTEKDEFA
Sbjct: 61  GCYVDIAPCYPEEAHVYKLEKVIFKGKSQYQDLFVFQSPTHGKVVILDGSLQLTEKDEFA 120

Query: 121 YQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFP 180
           YQEMLTHLPLCSIPNPKKVLLIGGGDGGILRE+SRHACVE IDICDLDKM   VYK++FP
Sbjct: 121 YQEMLTHLPLCSIPNPKKVLLIGGGDGGILREISRHACVEHIDICDLDKMVIDVYKRYFP 180

Query: 181 DIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKA 240
           DIAIGYKDPRVN  IGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNED+LKS+A A
Sbjct: 181 DIAIGYKDPRVNVCIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDLLKSMATA 240

Query: 241 LKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGS------------------------- 289
           LKPGGVMS PADSIW NNFAMEDTITLCR+IFKGS                         
Sbjct: 241 LKPGGVMSTPADSIWQNNFAMEDTITLCRDIFKGSVNYAWTSVPSYPSGVIGFMLCSTAG 300

[Close]

BLAST of MELO3C002252 vs. NCBI nr
Match: XP_022137674.1 (spermidine synthase 1-like [Momordica charantia])

HSP 1 Score: 424.1 bits (1089), Expect = 9.7e-115
Identity = 209/288 (72.57%), Postives = 241/288 (83.68%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           MAFQ G+SSS +++ LHV         P+ ++S +  QNG  NG+Q+  S SPVFPG Y 
Sbjct: 1   MAFQTGLSSSFLESHLHV--------TPVNVVSQNVTQNG--NGIQNSASLSPVFPGYYA 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           D+AP +PE+ HVYK+EK+IF+ KSQYQDLFVFQT+THGKVVILDGSLQLTEKDEFAYQEM
Sbjct: 61  DLAPSWPEEAHVYKIEKIIFQEKSQYQDLFVFQTATHGKVVILDGSLQLTEKDEFAYQEM 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAI 180
           LTHLPLCSIPNPKKVLLIGGGDGGILREVSRH+ VE IDICDLDKM   VYKK FPDIA+
Sbjct: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHSSVEHIDICDLDKMVIDVYKKFFPDIAV 180

Query: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240
           GY+DPRVN  IGDG AFIKS+PP TYDAII+DAFQGMGAYATELS++D L+SIAKALKPG
Sbjct: 181 GYEDPRVNVTIGDGAAFIKSIPPGTYDAIILDAFQGMGAYATELSDKDFLESIAKALKPG 240

Query: 241 GVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFSLPAFAKSAMG 286
           GVMS PADS+WL NFAMEDTI LCR IFKGS++ A  S+P++   A+G
Sbjct: 241 GVMSTPADSVWLKNFAMEDTIALCRKIFKGSVNYAWTSVPSYPSGAIG 278

[Close]

BLAST of MELO3C002252 vs. ExPASy TrEMBL
Match: A0A5D3BJ52 (Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003540 PE=3 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 2.1e-155
Identity = 282/313 (90.10%), Postives = 284/313 (90.73%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM
Sbjct: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAI 180
           LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM   VYKKHFPDIAI
Sbjct: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAI 180

Query: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240
           GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG
Sbjct: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240

Query: 241 GVMSAPADSIWLNNFAMEDTITLCRN---------------------IFKGSIHSAAFSL 290
           GVMSAPADSIWLNNFAMEDTITLC +                      +   IHSAAFSL
Sbjct: 241 GVMSAPADSIWLNNFAMEDTITLCLDFKRPVNPLDPSNFGVAKGPPKFYNSEIHSAAFSL 300

[Close]

BLAST of MELO3C002252 vs. ExPASy TrEMBL
Match: A0A5A7UJN5 (Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00590 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.5e-148
Identity = 274/313 (87.54%), Postives = 277/313 (88.50%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV
Sbjct: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQ      VVILDGSLQLTEKDEFAYQEM
Sbjct: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQ------VVILDGSLQLTEKDEFAYQEM 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAI 180
           LTHLPLCSI NPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM   VYKKHFPDIAI
Sbjct: 121 LTHLPLCSILNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAI 180

Query: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240
           GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG
Sbjct: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240

Query: 241 GVMSAPADSIWLNNFAMEDTITLCRN---------------------IFKGSIHSAAFSL 290
           GVMSAPADSIWLNNFAMEDTITLC +                      +   IH+AAFSL
Sbjct: 241 GVMSAPADSIWLNNFAMEDTITLCLDFKRPVNPLDPSNFGVAKGPPKFYNSEIHTAAFSL 300

[Close]

BLAST of MELO3C002252 vs. ExPASy TrEMBL
Match: A0A1S3BF22 (spermidine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103488909 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.6e-147
Identity = 275/333 (82.58%), Postives = 275/333 (82.58%), Query Frame = 0


Query: 15  MLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYK 74
           MLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYK
Sbjct: 1   MLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYVDIAPFYPEQGHVYK 60

Query: 75  VEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKK 134
           VEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKK
Sbjct: 61  VEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKK 120

Query: 135 VLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAIGYKDPRVNSYIGDG 194
           VLLIGGGDGGILREVSRHACVEQIDICDLDKM   VYKKHFPDIAIGYKDPRVNSYIGDG
Sbjct: 121 VLLIGGGDGGILREVSRHACVEQIDICDLDKMVIDVYKKHFPDIAIGYKDPRVNSYIGDG 180

Query: 195 VAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNN 254
           VAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNN
Sbjct: 181 VAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNN 240

Query: 255 FAMEDTITLCRNIFKGS------------------------------------------- 290
           FAMEDTITLCRNIFKGS                                           
Sbjct: 241 FAMEDTITLCRNIFKGSVNYAWTSVPSYASGSIGFMLCSTDGPSVDFKRPVNPLDPSNFG 300

[Close]

BLAST of MELO3C002252 vs. ExPASy TrEMBL
Match: A0A6J1C7X6 (spermidine synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111009053 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.7e-115
Identity = 209/288 (72.57%), Postives = 241/288 (83.68%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           MAFQ G+SSS +++ LHV         P+ ++S +  QNG  NG+Q+  S SPVFPG Y 
Sbjct: 1   MAFQTGLSSSFLESHLHV--------TPVNVVSQNVTQNG--NGIQNSASLSPVFPGYYA 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           D+AP +PE+ HVYK+EK+IF+ KSQYQDLFVFQT+THGKVVILDGSLQLTEKDEFAYQEM
Sbjct: 61  DLAPSWPEEAHVYKIEKIIFQEKSQYQDLFVFQTATHGKVVILDGSLQLTEKDEFAYQEM 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKM---VYKKHFPDIAI 180
           LTHLPLCSIPNPKKVLLIGGGDGGILREVSRH+ VE IDICDLDKM   VYKK FPDIA+
Sbjct: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHSSVEHIDICDLDKMVIDVYKKFFPDIAV 180

Query: 181 GYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPG 240
           GY+DPRVN  IGDG AFIKS+PP TYDAII+DAFQGMGAYATELS++D L+SIAKALKPG
Sbjct: 181 GYEDPRVNVTIGDGAAFIKSIPPGTYDAIILDAFQGMGAYATELSDKDFLESIAKALKPG 240

Query: 241 GVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFSLPAFAKSAMG 286
           GVMS PADS+WL NFAMEDTI LCR IFKGS++ A  S+P++   A+G
Sbjct: 241 GVMSTPADSVWLKNFAMEDTIALCRKIFKGSVNYAWTSVPSYPSGAIG 278

[Close]

BLAST of MELO3C002252 vs. ExPASy TrEMBL
Match: A0A0A0LQV4 (PABS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045980 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.9e-103
Identity = 202/281 (71.89%), Postives = 221/281 (78.65%), Query Frame = 0


Query: 1   MAFQNGVSSSPIKAMLHVPTIETNRNEPIEIISFSPIQNGTQNGVQDGDSFSPVFPGCYV 60
           M FQNGVSSSPIKAMLH PTIETN NEPIEIISFSPIQNGTQN    GDSFSP FPGCYV
Sbjct: 1   MTFQNGVSSSPIKAMLHAPTIETNHNEPIEIISFSPIQNGTQN----GDSFSPAFPGCYV 60

Query: 61  DIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEM 120
           DIAPFYP+ G V+K+EKVIFKGKSQYQDLFVFQTSTHGKVVILDGS  L E+ E  +++ 
Sbjct: 61  DIAPFYPDHGQVFKLEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSCSLEEEMEGFFEKH 120

Query: 121 LTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVYKKHFPDIAIGYK 180
           L  L L      K   +I           +R   +           VYKKHFP+IAIGYK
Sbjct: 121 LDMLAL-----SKSTFVIS----------TRWWLMS----------VYKKHFPNIAIGYK 180

Query: 181 DPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVM 240
           DPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMG YA ELSNED+LKSIAKALKPGGV+
Sbjct: 181 DPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGVYANELSNEDLLKSIAKALKPGGVL 240

Query: 241 SAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFSLPAFAK 282
           S PADSIWLNNFAMEDTITLCRNIFKGS++ A  S+P++A+
Sbjct: 241 STPADSIWLNNFAMEDTITLCRNIFKGSVNYAWTSVPSYAR 252

[Close]

BLAST of MELO3C002252 vs. TAIR 10
Match: AT1G23820.1 (spermidine synthase 1 )

HSP 1 Score: 292.0 bits (746), Expect = 5.4e-79
Identity = 138/250 (55.20%), Postives = 191/250 (76.40%), Query Frame = 0


Query: 41  TQNGVQDGD--SFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHG 100
           T+NG Q  +   FS V PG + +++P +P + H  KVEKV+F+GKS YQD+ VFQ++T+G
Sbjct: 72  TENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYG 131

Query: 101 KVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQI 160
           KV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGGDGG+LREV+RHA +EQI
Sbjct: 132 KVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQI 191

Query: 161 DICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMG 220
           D+C++DKMV    K+ FPD+AIGY+DPRVN  IGDGVAF+K+    +YDA+I+D+   +G
Sbjct: 192 DMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIG 251

Query: 221 AYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFS 280
             A EL  +   +S+A+AL+PGGV+   A+S+WL+   +ED ++ CR IFKGS++ A  S
Sbjct: 252 P-AKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTS 311

Query: 281 LPAFAKSAMG 286
           +P +    +G
Sbjct: 312 VPTYPSGVIG 320

[Close]

BLAST of MELO3C002252 vs. TAIR 10
Match: AT1G23820.2 (spermidine synthase 1 )

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-78
Identity = 137/246 (55.69%), Postives = 190/246 (77.24%), Query Frame = 0


Query: 41  TQNGVQDGD--SFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHG 100
           T+NG Q  +   FS V PG + +++P +P + H  KVEKV+F+GKS YQD+ VFQ++T+G
Sbjct: 72  TENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYG 131

Query: 101 KVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQI 160
           KV++LDG +QLTE+DE AYQEM+THLPLCSIPNPKKVL+IGGGDGG+LREV+RHA +EQI
Sbjct: 132 KVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQI 191

Query: 161 DICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMG 220
           D+C++DKMV    K+ FPD+AIGY+DPRVN  IGDGVAF+K+    +YDA+I+D+   +G
Sbjct: 192 DMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIG 251

Query: 221 AYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFS 280
             A EL  +   +S+A+AL+PGGV+   A+S+WL+   +ED ++ CR IFKGS++ A  S
Sbjct: 252 P-AKELFEKPFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTS 311

Query: 281 LPAFAK 282
           +P + +
Sbjct: 312 VPTYPR 316

[Close]

BLAST of MELO3C002252 vs. TAIR 10
Match: AT1G70310.1 (spermidine synthase 2 )

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-77
Identity = 133/251 (52.99%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 41  TQNG---VQDGDSFSPVFPGCYVDIAPFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTH 100
           T+NG   +++    S + PG + +I+P +P + H  KVEK++F+GKS YQD+ VFQ++T+
Sbjct: 31  TENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATY 90

Query: 101 GKVVILDGSLQLTEKDEFAYQEMLTHLPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQ 160
           GKV++LDG +QLTE+DE AYQEM+THLPLCSI NPKKVL+IGGGDGG+LREV+RH+ VEQ
Sbjct: 91  GKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQ 150

Query: 161 IDICDLDKMVY---KKHFPDIAIGYKDPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGM 220
           IDIC++DKMV    K++FP++A+GY+DPRVN  IGDGVAF+K+    TYDA+I+D+   +
Sbjct: 151 IDICEIDKMVVDVAKQYFPNVAVGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVDSSDPI 210

Query: 221 GAYATELSNEDILKSIAKALKPGGVMSAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAF 280
           G  A EL  +   +S+ +AL+PGGV+   A+S+WL+   +ED ++ CR+IFKGS++ A  
Sbjct: 211 GP-AKELFEKPFFESVNRALRPGGVVCTQAESLWLHMDIIEDIVSNCRDIFKGSVNYAWT 270

Query: 281 SLPAFAKSAMG 286
           S+P +    +G
Sbjct: 271 SVPTYPSGVIG 280

[Close]

BLAST of MELO3C002252 vs. TAIR 10
Match: AT5G53120.1 (spermidine synthase 3 )

HSP 1 Score: 246.5 bits (628), Expect = 2.6e-65
Identity = 116/225 (51.56%), Postives = 164/225 (72.89%), Query Frame = 0


Query: 64  PFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTH 123
           P +P + H  KVEKV+FK KS +Q++ VF+++T+GKV++LDG +QLTEKDE AYQEM+ H
Sbjct: 76  PMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAH 135

Query: 124 LPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVY---KKHFPDIAIGYK 183
           LPLCSI +PK VL++GGGDGG+LRE+SRH+ VE IDIC++DKMV    KK FP++A+G+ 
Sbjct: 136 LPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFD 195

Query: 184 DPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVM 243
           DPRV  +IGD   F++  P   YDAII+D+   +G  A  L  +   +++A+ALKPGGV+
Sbjct: 196 DPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPFFETLARALKPGGVL 255

Query: 244 SAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFSLPAFAKSAMG 286
              A+S+WL+   +ED I++CR  FK S+H A  S+P +    +G
Sbjct: 256 CNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIG 298

[Close]

BLAST of MELO3C002252 vs. TAIR 10
Match: AT5G53120.2 (spermidine synthase 3 )

HSP 1 Score: 246.5 bits (628), Expect = 2.6e-65
Identity = 116/225 (51.56%), Postives = 164/225 (72.89%), Query Frame = 0


Query: 64  PFYPEQGHVYKVEKVIFKGKSQYQDLFVFQTSTHGKVVILDGSLQLTEKDEFAYQEMLTH 123
           P +P + H  KVEKV+FK KS +Q++ VF+++T+GKV++LDG +QLTEKDE AYQEM+ H
Sbjct: 76  PMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQLTEKDECAYQEMIAH 135

Query: 124 LPLCSIPNPKKVLLIGGGDGGILREVSRHACVEQIDICDLDKMVY---KKHFPDIAIGYK 183
           LPLCSI +PK VL++GGGDGG+LRE+SRH+ VE IDIC++DKMV    KK FP++A+G+ 
Sbjct: 136 LPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVIDVSKKFFPELAVGFD 195

Query: 184 DPRVNSYIGDGVAFIKSVPPATYDAIIIDAFQGMGAYATELSNEDILKSIAKALKPGGVM 243
           DPRV  +IGD   F++  P   YDAII+D+   +G  A  L  +   +++A+ALKPGGV+
Sbjct: 196 DPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGP-ALALVEKPFFETLARALKPGGVL 255

Query: 244 SAPADSIWLNNFAMEDTITLCRNIFKGSIHSAAFSLPAFAKSAMG 286
              A+S+WL+   +ED I++CR  FK S+H A  S+P +    +G
Sbjct: 256 CNMAESMWLHTHLIEDMISICRQTFK-SVHYAWSSVPTYPSGVIG 298

The following BLAST results are available for this feature:

BLAST of MELO3C002252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48658	9.6e-81	56.40	Spermidine synthase 1 OS=Hyoscyamus niger OX=4079 PE=2 SV=1	[more]
Q9ZS45	2.1e-80	56.52	Spermidine synthase OS=Solanum lycopersicum OX=4081 GN=SPDSYN PE=2 SV=1	[more]
Q96557	6.2e-80	54.23	Spermidine synthase 2 OS=Datura stramonium OX=4076 PE=2 SV=1	[more]
O48660	7.6e-78	55.38	Spermidine synthase OS=Nicotiana sylvestris OX=4096 PE=2 SV=1	[more]
Q9ZUB3	7.6e-78	55.20	Spermidine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=SPDSYN1 PE=1 SV=1	[more]

BLAST of MELO3C002252 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99147.1	4.3e-155	90.10	spermidine synthase 1-like [Cucumis melo var. makuwa]	[more]
KAA0055218.1	1.1e-147	87.54	spermidine synthase 1-like [Cucumis melo var. makuwa]	[more]
XP_008446082.2	3.3e-147	82.58	PREDICTED: spermidine synthase 1-like [Cucumis melo]	[more]
XP_038893662.1	3.0e-132	72.57	spermidine synthase 2-like [Benincasa hispida]	[more]
XP_022137674.1	9.7e-115	72.57	spermidine synthase 1-like [Momordica charantia]	[more]

BLAST of MELO3C002252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJ52	2.1e-155	90.10	Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7UJN5	5.5e-148	87.54	Spermidine synthase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BF22	1.6e-147	82.58	spermidine synthase 1-like OS=Cucumis melo OX=3656 GN=LOC103488909 PE=3 SV=1	[more]
A0A6J1C7X6	4.7e-115	72.57	spermidine synthase 1-like OS=Momordica charantia OX=3673 GN=LOC111009053 PE=3 S...	[more]
A0A0A0LQV4	1.9e-103	71.89	PABS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045980 PE=3 S...	[more]

BLAST of MELO3C002252 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23820.1	5.4e-79	55.20	spermidine synthase 1	[more]
AT1G23820.2	1.6e-78	55.69	spermidine synthase 1	[more]
AT1G70310.1	2.3e-77	52.99	spermidine synthase 2	[more]
AT5G53120.1	2.6e-65	51.56	spermidine synthase 3	[more]
AT5G53120.2	2.6e-65	51.56	spermidine synthase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01564	Spermine_synth	coord: 114..286 e-value: 3.6E-42 score: 143.9
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 111..289 e-value: 7.2E-54 score: 184.7
None	No IPR available	PANTHER	PTHR11558:SF28	SYNTHASE 1, PUTATIVE-RELATED	coord: 31..285
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 153..240 e-value: 3.63976E-4 score: 37.4095
IPR035246	Spermidine synthase, tetramerisation domain	PFAM	PF17284	Spermine_synt_N	coord: 67..111 e-value: 4.7E-15 score: 55.2
IPR037163	Spermidine synthase, tetramerisation domain superfamily	GENE3D	2.30.140.10	Spermidine synthase, tetramerisation domain	coord: 43..110 e-value: 1.7E-17 score: 65.6
IPR001045	Spermidine/spermine synthases	PANTHER	PTHR11558	SPERMIDINE/SPERMINE SYNTHASE	coord: 31..285
IPR001045	Spermidine/spermine synthases	HAMAP	MF_00198	Spermidine_synth	coord: 60..285 score: 21.396654
IPR030373	Polyamine biosynthesis domain, conserved site	PROSITE	PS01330	PABS_1	coord: 135..148
IPR030374	Polyamine biosynthesis domain	PROSITE	PS51006	PABS_2	coord: 56..289 score: 58.21402
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 56..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002252.1	MELO3C002252.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity