MELO3C002147 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCTTTTCCCATTTCCTCACCCAACTTCCATCCTTCCCTCCCTTCTTACGTCTCGTTCTCTCTTATTATATAAATCCCCTCGCCTTCTTAAACCTTTCTCCGTTCGTTCTACACATCATTCCAACCGATTCTTCGACTTAGGGCTTCTTTTTTTTTTTTCCTTTTTCTTTTTCTTTTTCTTTTTGGGTTTGTTGGGATGGAGATCGATTCGGATATGAGAGAGAGGAACAGTACGGAGAAGATTGAAGTTCCGTTTCCTGTTCATAGTCAGGTGAGGAAGATCAAAGAGGAATCCGAGACGATCATGGATTGGCGACCTGGACAACCGGAGATCAGACCGCCGACCGCCGCCTTCCGCCAGATCTCTCGCTCGCCGCTTGGAATCTCCGGCCGCCCTATTTCGGTGGGGGATTCGTAGAAGGAGATTGTTTCCGGTAGAGATATTTTGGGGCTTATTTCGTCTCCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTAGTTTATGTAAATATTGCTGTTCTTAATTTTTAATTAGAGAGGTTTTTGGTTTCTGGATTTTGAATTTTGTATATTACTTATCTTTCTCTTTCTTATAATTTATAGTATGATATTACTCAAACTCTCGAATTCCTTCGAGACTGTTCATATGGAGAATATAAAATTTCTTAGATAATTATTCCAAAGTTGGTTTGTTTGAACTAAAAGAAGAGGAAATTTTCGATTGTTCATCTT GCGCTTTTCCCATTTCCTCACCCAACTTCCATCCTTCCCTCCCTTCTTACGTCTCGTTCTCTCTTATTATATAAATCCCCTCGCCTTCTTAAACCTTTCTCCGTTCGTTCTACACATCATTCCAACCGATTCTTCGACTTAGGGCTTCTTTTTTTTTTTTCCTTTTTCTTTTTCTTTTTCTTTTTGGGTTTGTTGGGATGGAGATCGATTCGGATATGAGAGAGAGGAACAGTACGGAGAAGATTGAAGTTCCGTTTCCTGTTCATAGTCAGGTGAGGAAGATCAAAGAGGAATCCGAGACGATCATGGATTGGCGACCTGGACAACCGGAGATCAGACCGCCGACCGCCGCCTTCCGCCAGATCTCTCGCTCGCCGCTTGGAATCTCCGGCCGCCCTATTTCGGTGGGGGATTCGTAGAAGGAGATTGTTTCCGGTAGAGATATTTTGGGGCTTATTTCGTCTCCCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTAGTTTATGTAAATATTGCTGTTCTTAATTTTTAATTAGAGAGGTTTTTGGTTTCTGGATTTTGAATTTTGTATATTACTTATCTTTCTCTTTCTTATAATTTATAGTATGATATTACTCAAACTCTCGAATTCCTTCGAGACTGTTCATATGGAGAATATAAAATTTCTTAGATAATTATTCCAAAGTTGGTTTGTTTGAACTAAAAGAAGAGGAAATTTTCGATTGTTCATCTT ATGGAGATCGATTCGGATATGAGAGAGAGGAACAGTACGGAGAAGATTGAAGTTCCGTTTCCTGTTCATAGTCAGGTGAGGAAGATCAAAGAGGAATCCGAGACGATCATGGATTGGCGACCTGGACAACCGGAGATCAGACCGCCGACCGCCGCCTTCCGCCAGATCTCTCGCTCGCCGCTTGGAATCTCCGGCCGCCCTATTTCGGTGGGGGATTCGTAG MEIDSDMRERNSTEKIEVPFPVHSQVRKIKEESETIMDWRPGQPEIRPPTAAFRQISRSPLGISGRPISVGDS Homology
BLAST of MELO3C002147 vs. NCBI nr
Match: TYJ99047.1 (hypothetical protein E5676_scaffold248G002510 [Cucumis melo var. makuwa]) HSP 1 Score: 147.1 bits (370), Expect = 5.8e-32 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MELO3C002147 vs. NCBI nr
Match: KGN64190.1 (hypothetical protein Csa_013611, partial [Cucumis sativus]) HSP 1 Score: 130.2 bits (326), Expect = 7.3e-27 Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 0
BLAST of MELO3C002147 vs. NCBI nr
Match: KAG6584306.1 (DEAD-box ATP-dependent RNA helicase 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 104.0 bits (258), Expect = 5.6e-19 Identity = 52/70 (74.29%), Postives = 58/70 (82.86%), Query Frame = 0
BLAST of MELO3C002147 vs. NCBI nr
Match: KAG7012158.1 (hypothetical protein SDJN02_24910, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 99.0 bits (245), Expect = 1.8e-17 Identity = 53/73 (72.60%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of MELO3C002147 vs. NCBI nr
Match: KAG6572977.1 (NF-X1-type zinc finger protein NFXL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.3 bits (225), Expect = 3.8e-15 Identity = 49/69 (71.01%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of MELO3C002147 vs. ExPASy TrEMBL
Match: A0A5D3BIV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002510 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.8e-32 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of MELO3C002147 vs. ExPASy TrEMBL
Match: A0A0A0LQJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042955 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.6e-27 Identity = 64/73 (87.67%), Postives = 68/73 (93.15%), Query Frame = 0
BLAST of MELO3C002147 vs. ExPASy TrEMBL
Match: A0A314ZBL8 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_28850 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-12 Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of MELO3C002147 vs. ExPASy TrEMBL
Match: A0A6A4PFG9 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr14g0370691 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.5e-12 Identity = 40/52 (76.92%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of MELO3C002147 vs. ExPASy TrEMBL
Match: A0A498I238 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_023484 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.2e-12 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of MELO3C002147 vs. TAIR 10
Match: AT1G67920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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