MELO3C000900.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C000900.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein Ycf2
Location	scaffold_chloroplast2: 24032 .. 24580 (+)
RNA-Seq Expression	MELO3C000900.jh1
Synteny	MELO3C000900.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTCAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGTCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAACTGGATATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAG

mRNA sequence

ATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTCAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGTCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAACTGGATATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAG

Coding sequence (CDS)

ATGAATAATCATCCGCTTCCGGAAGAAATCGAAGAATTTCTCGGGAATCCTACAAGATCCATTCGTTCTTTTTTCTCTGACAGATGGTCAGAACTTCATATGGGTTCGAATCCTATTCAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAAGAACAAGATGTTTCTTTTGTCCCTTCCAGTCGATCGGAAAATAAAGAAATAGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGATGAACTGGATATGGACAGTTCCAATAAGATTTCATTCTTGAACAAAAATCCATTTATTTATTTATTTCATCTATTCCATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATCTATTCACTCTATCAATAACCGAGCCGGATCTGGTGTATCATAAGGGATTTGCCTTTTCTATTGATTCCTACGGATTGGATCAAAAACAATTCTTGAATGAG

Protein sequence

MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPSSRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYLFHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE

Homology

[Close]

BLAST of MELO3C000900.jh1 vs. NCBI nr
Match: KAA0063017.1 (putative chloroplast RF21 [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 2.24e-121
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSN IQRSTRDQKLLKKEQDVSFVPS
Sbjct: 375 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNSIQRSTRDQKLLKKEQDVSFVPS 434

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKN FIYL
Sbjct: 435 RRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNSFIYL 494

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 495 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 554

Query: 181 LNE 183
           LNE
Sbjct: 555 LNE 557

[Close]

BLAST of MELO3C000900.jh1 vs. NCBI nr
Match: QRW36598.1 (hypothetical chloroplast RF21 [Cucumis melo] >QRW36618.1 hypothetical chloroplast RF21 [Cucumis melo])

HSP 1 Score: 373 bits (958), Expect = 4.49e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. NCBI nr
Match: ASY96830.1 (Ycf2 [Cucumis melo var. momordica] >ASY97004.1 Ycf2 [Cucumis melo var. cantalupo] >ASY97352.1 Ycf2 [Cucumis melo var. flexuosus] >ASY96836.1 Ycf2 [Cucumis melo var. momordica] >ASY97010.1 Ycf2 [Cucumis melo var. cantalupo])

HSP 1 Score: 373 bits (958), Expect = 4.50e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. NCBI nr
Match: YP_004841827.1 (hypothetical chloroplast RF21 [Cucumis melo subsp. melo] >YP_004841847.1 hypothetical chloroplast RF21 [Cucumis melo subsp. melo] >YP_009860117.1 hypothetical chloroplast RF21 [Cucumis melo subsp. agrestis] >YP_009860137.1 hypothetical chloroplast RF21 [Cucumis melo subsp. agrestis] >ASY96656.1 Ycf2 [Cucumis melo var. conomon] >ASY96743.1 Ycf2 [Cucumis melo var. makuwa] >ASY96917.1 Ycf2 [Cucumis melo var. dudaim] >ASY97178.1 Ycf2 [Cucumis melo var. inodorus] >QJF46428.1 Ycf2 [Cucumis melo])

HSP 1 Score: 373 bits (958), Expect = 4.50e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. NCBI nr
Match: VVA39770.1 (PREDICTED: Ycf2, partial [Prunus dulcis])

HSP 1 Score: 337 bits (863), Expect = 6.30e-116
Identity = 169/180 (93.89%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 4   HPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPSSRS 63
           H LPEEIEEFLGNPTRSIRSFFSDRWSELH+GSNP +RSTRDQKLLKKEQDVSFVPS RS
Sbjct: 1   HLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSRRS 60

Query: 64  ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYLFHL 123
           ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPF  LFHL
Sbjct: 61  ENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFFDLFHL 120

Query: 124 FHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 183
           FHDRNR GYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSI   GLDQKQFLNE
Sbjct: 121 FHDRNRGGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSI---GLDQKQFLNE 177

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy Swiss-Prot
Match: Q2QD30 (Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.4e-98
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 5   PLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPSSRSE 64
           PLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPI+RSTRDQKLLKKEQDVSFVPS RSE
Sbjct: 185 PLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIERSTRDQKLLKKEQDVSFVPSRRSE 244

Query: 65  NKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYLFHLF 124
           NKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFL KNPFIYLFHLF
Sbjct: 245 NKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLKKNPFIYLFHLF 304

Query: 125 HDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 184
           HDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE
Sbjct: 305 HDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQFLNE 363

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy Swiss-Prot
Match: B1A978 (Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 9.6e-95
Identity = 172/183 (93.99%), Postives = 174/183 (95.08%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNH LPEEIEEFLGNPTR IRSFFSDRWSELH+GSNP +RSTRDQKLLKKEQDVSFVPS
Sbjct: 471 MNNHLLPEEIEEFLGNPTRPIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPS 530

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPF  L
Sbjct: 531 RRSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFFDL 590

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNR G TLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 591 FHLFHDRNRGGSTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 650

Query: 181 LNE 184
           LNE
Sbjct: 651 LNE 653

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy Swiss-Prot
Match: Q14F97 (Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.8e-94
Identity = 171/183 (93.44%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNH LPEEIEEFLGNPTRSIRSFFSDRWSELH+GSNP +RSTRDQKLLKKEQDVSFVPS
Sbjct: 471 MNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPS 530

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFK ITYLQNTVSIHPISSDPGCDMV KDELDMDSSNKISFLNKNPF  L
Sbjct: 531 RRSENKEIVNIFKTITYLQNTVSIHPISSDPGCDMVLKDELDMDSSNKISFLNKNPFFDL 590

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRN  GYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAF IDSYGLDQKQF
Sbjct: 591 FHLFHDRNGGGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFFIDSYGLDQKQF 650

Query: 181 LNE 184
           LNE
Sbjct: 651 LNE 653

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy Swiss-Prot
Match: A4GYV4 (Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.8e-94
Identity = 171/183 (93.44%), Postives = 173/183 (94.54%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNH LPEEIEEFLGNPTRSIRSFFSDRWSELH+GSNP +RSTRDQKLLKKEQDVSFVPS
Sbjct: 471 MNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPS 530

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFK ITYLQNTVSIHPISSDPGCDMV KDELDMDSSNKISFLNKNPF  L
Sbjct: 531 RRSENKEIVNIFKTITYLQNTVSIHPISSDPGCDMVLKDELDMDSSNKISFLNKNPFFDL 590

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRN  GYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAF IDSYGLDQKQF
Sbjct: 591 FHLFHDRNGGGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFFIDSYGLDQKQF 650

Query: 181 LNE 184
           LNE
Sbjct: 651 LNE 653

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy Swiss-Prot
Match: A6MM80 (Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 4.8e-94
Identity = 168/183 (91.80%), Postives = 176/183 (96.17%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNH LPEEIEEFLGNPTRSIRSFFSDRWSELH+GSNP +RSTRDQKLLKK+QDVSFVPS
Sbjct: 473 MNNHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDVSFVPS 532

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKE+V+IFKIITYLQNTVSIHPISSDPGCDMVPKDE DMDSSNKISFLNKNPF+ L
Sbjct: 533 RRSENKEMVDIFKIITYLQNTVSIHPISSDPGCDMVPKDEPDMDSSNKISFLNKNPFLDL 592

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNR GYTLHHDFESEERFQE+ADLFTLSITEPDLVYHKGFA SIDSYGLDQK+F
Sbjct: 593 FHLFHDRNRGGYTLHHDFESEERFQEIADLFTLSITEPDLVYHKGFALSIDSYGLDQKKF 652

Query: 181 LNE 184
           LNE
Sbjct: 653 LNE 655

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy TrEMBL
Match: A0A5A7V7Q7 (Putative chloroplast RF21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001190 PE=4 SV=1)

HSP 1 Score: 365 bits (937), Expect = 1.08e-121
Identity = 180/183 (98.36%), Postives = 180/183 (98.36%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSN IQRSTRDQKLLKKEQDVSFVPS
Sbjct: 375 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNSIQRSTRDQKLLKKEQDVSFVPS 434

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKN FIYL
Sbjct: 435 RRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNSFIYL 494

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 495 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 554

Query: 181 LNE 183
           LNE
Sbjct: 555 LNE 557

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy TrEMBL
Match: A0A249RYX8 (Protein Ycf2 OS=Cucumis melo var. momordica OX=2034244 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 373 bits (958), Expect = 2.18e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy TrEMBL
Match: G3ETW1 (Protein Ycf2 OS=Cucumis melo subsp. melo OX=412675 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 373 bits (958), Expect = 2.18e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy TrEMBL
Match: A0A249RZ46 (Protein Ycf2 OS=Cucumis melo var. dudaim OX=2034236 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 373 bits (958), Expect = 2.18e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. ExPASy TrEMBL
Match: A0A1S4EU72 (Protein Ycf2 OS=Cucumis melo OX=3656 GN=ycf2 PE=3 SV=1)

HSP 1 Score: 373 bits (958), Expect = 2.18e-116
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS
Sbjct: 467 MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 526

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
           SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL
Sbjct: 527 SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 586

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF
Sbjct: 587 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 646

Query: 181 LNE 183
           LNE
Sbjct: 647 LNE 649

[Close]

BLAST of MELO3C000900.jh1 vs. TAIR 10
Match: ATCG00860.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-90
Identity = 165/183 (90.16%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNH LPEE EEFLGNPTR+IRSFFSDRWSELH+GSNP +RSTRDQKLLKKEQDVSFVPS
Sbjct: 473 MNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPS 532

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPF  L
Sbjct: 533 RRSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFFDL 592

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFH+R R GYTL H  ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQ+QF
Sbjct: 593 FHLFHERKRGGYTLRH--ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQRQF 652

Query: 181 LNE 184
           L E
Sbjct: 653 LKE 653

[Close]

BLAST of MELO3C000900.jh1 vs. TAIR 10
Match: ATCG01280.1 (Chloroplast Ycf2;ATPase, AAA type, core )

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-90
Identity = 165/183 (90.16%), Postives = 170/183 (92.90%), Query Frame = 0


Query: 1   MNNHPLPEEIEEFLGNPTRSIRSFFSDRWSELHMGSNPIQRSTRDQKLLKKEQDVSFVPS 60
           MNNH LPEE EEFLGNPTR+IRSFFSDRWSELH+GSNP +RSTRDQKLLKKEQDVSFVPS
Sbjct: 473 MNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPS 532

Query: 61  SRSENKEIVNIFKIITYLQNTVSIHPISSDPGCDMVPKDELDMDSSNKISFLNKNPFIYL 120
            RSENKEIVNIFKIITYLQNTVSIHPISSD GCDMVPKDELDMDSSNKISFLNKNPF  L
Sbjct: 533 RRSENKEIVNIFKIITYLQNTVSIHPISSDLGCDMVPKDELDMDSSNKISFLNKNPFFDL 592

Query: 121 FHLFHDRNRRGYTLHHDFESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQKQF 180
           FHLFH+R R GYTL H  ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQ+QF
Sbjct: 593 FHLFHERKRGGYTLRH--ESEERFQEMADLFTLSITEPDLVYHKGFAFSIDSYGLDQRQF 652

Query: 181 LNE 184
           L E
Sbjct: 653 LKE 653

The following BLAST results are available for this feature:

BLAST of MELO3C000900.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063017.1	2.24e-121	98.36	putative chloroplast RF21 [Cucumis melo var. makuwa]	[more]
QRW36598.1	4.49e-116	100.00	hypothetical chloroplast RF21 [Cucumis melo] >QRW36618.1 hypothetical chloroplas...	[more]
ASY96830.1	4.50e-116	100.00	Ycf2 [Cucumis melo var. momordica] >ASY97004.1 Ycf2 [Cucumis melo var. cantalupo...	[more]
YP_004841827.1	4.50e-116	100.00	hypothetical chloroplast RF21 [Cucumis melo subsp. melo] >YP_004841847.1 hypothe...	[more]
VVA39770.1	6.30e-116	93.89	PREDICTED: Ycf2, partial [Prunus dulcis]	[more]

BLAST of MELO3C000900.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD30	1.4e-98	98.32	Protein Ycf2 OS=Cucumis sativus OX=3659 GN=ycf2-A PE=3 SV=1	[more]
B1A978	9.6e-95	93.99	Protein Ycf2 OS=Carica papaya OX=3649 GN=ycf2-A PE=3 SV=1	[more]
Q14F97	2.8e-94	93.44	Protein Ycf2 OS=Populus alba OX=43335 GN=ycf2-A PE=3 SV=1	[more]
A4GYV4	2.8e-94	93.44	Protein Ycf2 OS=Populus trichocarpa OX=3694 GN=ycf2-1 PE=3 SV=1	[more]
A6MM80	4.8e-94	91.80	Protein Ycf2 OS=Buxus microphylla OX=153571 GN=ycf2-A PE=3 SV=1	[more]

BLAST of MELO3C000900.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V7Q7	1.08e-121	98.36	Putative chloroplast RF21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A249RYX8	2.18e-116	100.00	Protein Ycf2 OS=Cucumis melo var. momordica OX=2034244 GN=ycf2 PE=3 SV=1	[more]
G3ETW1	2.18e-116	100.00	Protein Ycf2 OS=Cucumis melo subsp. melo OX=412675 GN=ycf2 PE=3 SV=1	[more]
A0A249RZ46	2.18e-116	100.00	Protein Ycf2 OS=Cucumis melo var. dudaim OX=2034236 GN=ycf2 PE=3 SV=1	[more]
A0A1S4EU72	2.18e-116	100.00	Protein Ycf2 OS=Cucumis melo OX=3656 GN=ycf2 PE=3 SV=1	[more]

BLAST of MELO3C000900.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00860.1	1.5e-90	90.16	Chloroplast Ycf2;ATPase, AAA type, core	[more]
ATCG01280.1	1.5e-90	90.16	Chloroplast Ycf2;ATPase, AAA type, core	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 1..183 e-value: 8.0E-115 score: 384.6
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 1..180
None	No IPR available	PANTHER	PTHR33078:SF69	BNAA06G19310D PROTEIN	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000900.jh1.t1	MELO3C000900.jh1.t1	mRNA