MELO3C000615 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTTAAAACAAATTTCAGAAAAAAGAAAAGAAAAGAAAAGAAAAAACAACAACAACACTGTTAGTGCTCTGCAGCGCTGTTGTGATGAGGATGATTATACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTACTTCTCCTTCTTCAACTTTTTTTTTTTATCCCTTAAATTTCCATTTTTTTATATAAAAAAACACACATCAAAATCCTCCATAGCACTAACTCGTAGGAATTCACTTTCTGACTTCCATTTTTTTTCCAGCTGTCTTCTCCTTCTCTCTCTCTCTCTCTTCCTTTTTAATTATGGCTTCCTTTTAAATTCCTTCCTCCCCATTTCTCCATTCTTCTCCCTTTAATTTCATGGAGTTTCAATCCTCTCAATTTTCATAATTTCCTTGTTTTATTATAATTATTAATTACTATATATATCCTATATTCCTCGTCGGAGGCCGGAGTTTTCTTTCATCACATATATGGAACCACCCGCTCCTGGATCTGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCTTTAACTGTTGATACCACTATAAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCCATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTCGGCGGCGGCGGTGGTGCTGGTCATATGGTGGTCGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGTGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAGATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCCCTTTGGGATGAAGTCTCCAGGTAA TTTTTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTTAAAACAAATTTCAGAAAAAAGAAAAGAAAAGAAAAGAAAAAACAACAACAACACTGTTAGTGCTCTGCAGCGCTGTTGTGATGAGGATGATTATACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTACTTCTCCTTCTTCAACTTTTTTTTTTTATCCCTTAAATTTCCATTTTTTTATATAAAAAAACACACATCAAAATCCTCCATAGCACTAACTCGTAGGAATTCACTTTCTGACTTCCATTTTTTTTCCAGCTGTCTTCTCCTTCTCTCTCTCTCTCTCTTCCTTTTTAATTATGGCTTCCTTTTAAATTCCTTCCTCCCCATTTCTCCATTCTTCTCCCTTTAATTTCATGGAGTTTCAATCCTCTCAATTTTCATAATTTCCTTGTTTTATTATAATTATTAATTACTATATATATCCTATATTCCTCGTCGGAGGCCGGAGTTTTCTTTCATCACATATATGGAACCACCCGCTCCTGGATCTGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCTTTAACTGTTGATACCACTATAAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCCATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTCGGCGGCGGCGGTGGTGCTGGTCATATGGTGGTCGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGTGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAGATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCCCTTTGGGATGAAGTCTCCAGGTAA ATGGAACCACCCGCTCCTGGATCTGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCTTTAACTGTTGATACCACTATAAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCCATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTCGGCGGCGGCGGTGGTGCTGGTCATATGGTGGTCGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGTGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAGATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCCCTTTGGGATGAAGTCTCCAGGTAA MEPPAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR Homology
BLAST of MELO3C000615 vs. NCBI nr
Match: KAA0042619.1 (trihelix transcription factor GTL1 isoform X2 [Cucumis melo var. makuwa] >TYK06021.1 trihelix transcription factor GTL1 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62 Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of MELO3C000615 vs. NCBI nr
Match: XP_011654663.1 (trihelix transcription factor GTL1 isoform X2 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60 Identity = 126/132 (95.45%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of MELO3C000615 vs. NCBI nr
Match: XP_011654662.1 (trihelix transcription factor GTL1 isoform X1 [Cucumis sativus] >KAE8647820.1 hypothetical protein Csa_000216 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60 Identity = 126/132 (95.45%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of MELO3C000615 vs. NCBI nr
Match: XP_038874539.1 (trihelix transcription factor GTL1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41 Identity = 108/136 (79.41%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of MELO3C000615 vs. NCBI nr
Match: XP_038874540.1 (trihelix transcription factor GTL1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41 Identity = 108/136 (79.41%), Postives = 110/136 (80.88%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q9C882 (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19 Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q39117 (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.1e-15 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q9C6K3 (Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 8.5e-13 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q9LZS0 (Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.8e-10 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A5A7TMN2 (Trihelix transcription factor GTL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001190 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.5e-63 Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1I2L2 (trihelix transcription factor GTL1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469029 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29 Identity = 87/131 (66.41%), Postives = 93/131 (70.99%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1I499 (trihelix transcription factor GTL1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469029 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29 Identity = 87/131 (66.41%), Postives = 93/131 (70.99%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1ELD6 (trihelix transcription factor GTL1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435698 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 5.2e-29 Identity = 90/137 (65.69%), Postives = 96/137 (70.07%), Query Frame = 0
BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1EQK5 (trihelix transcription factor GTL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435698 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 5.2e-29 Identity = 90/137 (65.69%), Postives = 96/137 (70.07%), Query Frame = 0
BLAST of MELO3C000615 vs. TAIR 10
Match: AT1G33240.1 (GT-2-like 1 ) HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20 Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of MELO3C000615 vs. TAIR 10
Match: AT1G76890.2 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 6.5e-16 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
BLAST of MELO3C000615 vs. TAIR 10
Match: AT1G76880.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14 Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
BLAST of MELO3C000615 vs. TAIR 10
Match: AT5G03680.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 65.1 bits (157), Expect = 4.8e-11 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 0
BLAST of MELO3C000615 vs. TAIR 10
Match: AT3G10000.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10 Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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