MELO3C000615 (gene) Melon (DHL92) v4

Overview


Name	MELO3C000615
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Trihelix transcription factor GTL1 isoform X2
Location	chr09: 23228374 .. 23229274 (-)
RNA-Seq Expression	MELO3C000615
Synteny	MELO3C000615

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTTAAAACAAATTTCAGAAAAAAGAAAAGAAAAGAAAAGAAAAAACAACAACAACACTGTTAGTGCTCTGCAGCGCTGTTGTGATGAGGATGATTATACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTACTTCTCCTTCTTCAACTTTTTTTTTTTATCCCTTAAATTTCCATTTTTTTATATAAAAAAACACACATCAAAATCCTCCATAGCACTAACTCGTAGGAATTCACTTTCTGACTTCCATTTTTTTTCCAGCTGTCTTCTCCTTCTCTCTCTCTCTCTCTTCCTTTTTAATTATGGCTTCCTTTTAAATTCCTTCCTCCCCATTTCTCCATTCTTCTCCCTTTAATTTCATGGAGTTTCAATCCTCTCAATTTTCATAATTTCCTTGTTTTATTATAATTATTAATTACTATATATATCCTATATTCCTCGTCGGAGGCCGGAGTTTTCTTTCATCACATATATGGAACCACCCGCTCCTGGATCTGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCTTTAACTGTTGATACCACTATAAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCCATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTCGGCGGCGGCGGTGGTGCTGGTCATATGGTGGTCGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGTGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAGATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCCCTTTGGGATGAAGTCTCCAGGTAA

mRNA sequence

TTTTTTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTTAAAACAAATTTCAGAAAAAAGAAAAGAAAAGAAAAGAAAAAACAACAACAACACTGTTAGTGCTCTGCAGCGCTGTTGTGATGAGGATGATTATACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTTCTACTTCTCCTTCTTCAACTTTTTTTTTTTATCCCTTAAATTTCCATTTTTTTATATAAAAAAACACACATCAAAATCCTCCATAGCACTAACTCGTAGGAATTCACTTTCTGACTTCCATTTTTTTTCCAGCTGTCTTCTCCTTCTCTCTCTCTCTCTCTTCCTTTTTAATTATGGCTTCCTTTTAAATTCCTTCCTCCCCATTTCTCCATTCTTCTCCCTTTAATTTCATGGAGTTTCAATCCTCTCAATTTTCATAATTTCCTTGTTTTATTATAATTATTAATTACTATATATATCCTATATTCCTCGTCGGAGGCCGGAGTTTTCTTTCATCACATATATGGAACCACCCGCTCCTGGATCTGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCTTTAACTGTTGATACCACTATAAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCCATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTCGGCGGCGGCGGTGGTGCTGGTCATATGGTGGTCGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGTGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAGATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCCCTTTGGGATGAAGTCTCCAGGTAA

Coding sequence (CDS)

ATGGAACCACCCGCTCCTGGATCTGGATTACCTGATCCATCTCAATTATTTAGAGTAGTTTCCACACCACCACCACCGCCGTCTTTAACTGTTGATACCACTATAAGTGATTCTCAACAAGTCGAAGCTGCTTCTCCCATTAGTAGCCGACCTCCTGCTGTACCATCTTCTTACGAGGAGCTCATTCGTCTCGGCGGCGGCGGTGGTGCTGGTCATATGGTGGTCGACGACGATGAAGCTGACGGCCGTAGCGGCGGCGGAAGTGGAGGAAGTGGTGGAAATCGGTGGCCGCGTCAGGAAACACTTGCTTTGCTTAAAATTAGGTCGGAGATGGATTCGGTATTTCGTGATGCTACACTTAAAGGTCCCCTTTGGGATGAAGTCTCCAGGTAA

Protein sequence

MEPPAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR

Homology

[Close]

BLAST of MELO3C000615 vs. NCBI nr
Match: KAA0042619.1 (trihelix transcription factor GTL1 isoform X2 [Cucumis melo var. makuwa] >TYK06021.1 trihelix transcription factor GTL1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MEPPAP--GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY 60
           MEPPAP  GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY
Sbjct: 1   MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY 60

Query: 61  EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120
           EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA
Sbjct: 61  EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120

Query: 121 TLKGPLWDEVSR 131
           TLKGPLWDEVSR
Sbjct: 121 TLKGPLWDEVSR 132

[Close]

BLAST of MELO3C000615 vs. NCBI nr
Match: XP_011654663.1 (trihelix transcription factor GTL1 isoform X2 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60
Identity = 126/132 (95.45%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MEPPAP--GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY 60
           MEPPAP  GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDS QVEAASPISSRPPAVPSSY
Sbjct: 1   MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSHQVEAASPISSRPPAVPSSY 60

Query: 61  EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120
           EELIRL GGGG G MVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA
Sbjct: 61  EELIRLSGGGGGGQMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120

Query: 121 TLKGPLWDEVSR 131
           TLKGPLWDEVSR
Sbjct: 121 TLKGPLWDEVSR 132

[Close]

BLAST of MELO3C000615 vs. NCBI nr
Match: XP_011654662.1 (trihelix transcription factor GTL1 isoform X1 [Cucumis sativus] >KAE8647820.1 hypothetical protein Csa_000216 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 5.3e-60
Identity = 126/132 (95.45%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MEPPAP--GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY 60
           MEPPAP  GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDS QVEAASPISSRPPAVPSSY
Sbjct: 1   MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSHQVEAASPISSRPPAVPSSY 60

Query: 61  EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120
           EELIRL GGGG G MVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA
Sbjct: 61  EELIRLSGGGGGGQMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120

Query: 121 TLKGPLWDEVSR 131
           TLKGPLWDEVSR
Sbjct: 121 TLKGPLWDEVSR 132

[Close]

BLAST of MELO3C000615 vs. NCBI nr
Match: XP_038874539.1 (trihelix transcription factor GTL1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 108/136 (79.41%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 1   MEPPAPGS----GLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS 60
           ME  A GS    GLPD SQLF V S    PP LT+D TI DSQQVEAASPISSRPPAVPS
Sbjct: 1   MEGAAAGSGSGLGLPDRSQLFGVSS----PPPLTIDATIGDSQQVEAASPISSRPPAVPS 60

Query: 61  S--YEELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSV 120
           S  YEELIRLGGGGG G MVVDD+EAD RSG   GGSGGNRWPRQETLALLKIRSEMDS 
Sbjct: 61  SLNYEELIRLGGGGG-GQMVVDDEEAD-RSG---GGSGGNRWPRQETLALLKIRSEMDSA 120

Query: 121 FRDATLKGPLWDEVSR 131
           FRDATLKGPLWDEVSR
Sbjct: 121 FRDATLKGPLWDEVSR 127

[Close]

BLAST of MELO3C000615 vs. NCBI nr
Match: XP_038874540.1 (trihelix transcription factor GTL1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 4.2e-41
Identity = 108/136 (79.41%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 1   MEPPAPGS----GLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS 60
           ME  A GS    GLPD SQLF V S    PP LT+D TI DSQQVEAASPISSRPPAVPS
Sbjct: 1   MEGAAAGSGSGLGLPDRSQLFGVSS----PPPLTIDATIGDSQQVEAASPISSRPPAVPS 60

Query: 61  S--YEELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSV 120
           S  YEELIRLGGGGG G MVVDD+EAD RSG   GGSGGNRWPRQETLALLKIRSEMDS 
Sbjct: 61  SLNYEELIRLGGGGG-GQMVVDDEEAD-RSG---GGSGGNRWPRQETLALLKIRSEMDSA 120

Query: 121 FRDATLKGPLWDEVSR 131
           FRDATLKGPLWDEVSR
Sbjct: 121 FRDATLKGPLWDEVSR 127

[Close]

BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q9C882 (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19
Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 38  SQQVEAASPISSRPPAVPSSYEELIR---------LGGGGGAGHMVVDDDEADGRSGGGS 97
           ++ VE ASPISSRPPA  ++ EEL+R         LGGGGG G             GG +
Sbjct: 10  NEVVEEASPISSRPPA--NNLEELMRFSAAADDGGLGGGGGGG------------GGGSA 69

Query: 98  GGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR 131
             S GNRWPR+ETLALL+IRS+MDS FRDATLK PLW+ VSR
Sbjct: 70  SSSSGNRWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSR 97

[Close]

BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q39117 (Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.1e-15
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 67  GGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWD 126
           GGG G  V ++ +      G   GSGGNRWPR ETLALL+IRSEMD  FRD+TLK PLW+
Sbjct: 13  GGGVGGSVEEEKDMKMEETGEGAGSGGNRWPRPETLALLRIRSEMDKAFRDSTLKAPLWE 72

Query: 127 EVSR 131
           E+SR
Sbjct: 73  EISR 76

[Close]

BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q9C6K3 (Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.5e-13
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 90  GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR 131
           G GGNRWPRQETLALLKIRS+M   FRDA++KGPLW+EVSR
Sbjct: 56  GFGGNRWPRQETLALLKIRSDMGIAFRDASVKGPLWEEVSR 96

[Close]

BLAST of MELO3C000615 vs. ExPASy Swiss-Prot
Match: Q9LZS0 (Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.8e-10
Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 0


Query: 4   PAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIR 63
           P+  S  P     F +    PPP  L   TT  D   +           +   +   L  
Sbjct: 29  PSTSSHFPSDFFGFNLAPVQPPPHRLHQFTTDQDMGFLPRGIHGLGGGSSTAGNNSNLNA 88

Query: 64  LGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGP 123
              GGG G     D    G   GG GG G  RWPRQETL LL+IRS +D  F++A  KGP
Sbjct: 89  STSGGGVGFSGFLDGGGFGSGVGGDGG-GTGRWPRQETLTLLEIRSRLDHKFKEANQKGP 148

Query: 124 LWDEVSR 131
           LWDEVSR
Sbjct: 149 LWDEVSR 154

[Close]

BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A5A7TMN2 (Trihelix transcription factor GTL1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001190 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.5e-63
Identity = 130/132 (98.48%), Postives = 130/132 (98.48%), Query Frame = 0


Query: 1   MEPPAP--GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY 60
           MEPPAP  GSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY
Sbjct: 1   MEPPAPGSGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSY 60

Query: 61  EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120
           EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA
Sbjct: 61  EELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDA 120

Query: 121 TLKGPLWDEVSR 131
           TLKGPLWDEVSR
Sbjct: 121 TLKGPLWDEVSR 132

[Close]

BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1I2L2 (trihelix transcription factor GTL1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469029 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29
Identity = 87/131 (66.41%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 1   MEPPAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYE 60
           ME    GSG    S+LF V  TPP    LTV+  +SDSQ VEAASPISSRPPA  S +YE
Sbjct: 1   MEGVGGGSG----SELFGV--TPP----LTVE-AVSDSQPVEAASPISSRPPASSSLNYE 60

Query: 61  ELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDAT 120
           ELIR     G G M +DDD   G   GG GGS GNRWPRQETLALLKIRS+MDS FRDAT
Sbjct: 61  ELIR-----GGGQMAIDDDALVGEDAGGGGGSSGNRWPRQETLALLKIRSDMDSAFRDAT 115

Query: 121 LKGPLWDEVSR 131
           LKGPLWDEVSR
Sbjct: 121 LKGPLWDEVSR 115

[Close]

BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1I499 (trihelix transcription factor GTL1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469029 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29
Identity = 87/131 (66.41%), Postives = 93/131 (70.99%), Query Frame = 0


Query: 1   MEPPAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYE 60
           ME    GSG    S+LF V  TPP    LTV+  +SDSQ VEAASPISSRPPA  S +YE
Sbjct: 1   MEGVGGGSG----SELFGV--TPP----LTVE-AVSDSQPVEAASPISSRPPASSSLNYE 60

Query: 61  ELIRLGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDAT 120
           ELIR     G G M +DDD   G   GG GGS GNRWPRQETLALLKIRS+MDS FRDAT
Sbjct: 61  ELIR-----GGGQMAIDDDALVGEDAGGGGGSSGNRWPRQETLALLKIRSDMDSAFRDAT 115

Query: 121 LKGPLWDEVSR 131
           LKGPLWDEVSR
Sbjct: 121 LKGPLWDEVSR 115

[Close]

BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1ELD6 (trihelix transcription factor GTL1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435698 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.2e-29
Identity = 90/137 (65.69%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 1   MEPPAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYE 60
           ME    GSG    S+LF V       PSLTVD  +SDSQ VEAASPISSRPPA  S +YE
Sbjct: 1   MEGVGGGSG----SELFGV------KPSLTVD-VVSDSQPVEAASPISSRPPASSSLNYE 60

Query: 61  ELIRLGGGGGAGHMVVDDD-----EADGRSG-GGSGGSGGNRWPRQETLALLKIRSEMDS 120
           ELIR     G G M +DDD     +A G SG GG GGS GNRWPRQETLALLKIRS+MDS
Sbjct: 61  ELIR-----GGGQMAIDDDALVGEDAGGGSGSGGGGGSAGNRWPRQETLALLKIRSDMDS 120

Query: 121 VFRDATLKGPLWDEVSR 131
            FRDATLKGPLWDEVSR
Sbjct: 121 AFRDATLKGPLWDEVSR 121

[Close]

BLAST of MELO3C000615 vs. ExPASy TrEMBL
Match: A0A6J1EQK5 (trihelix transcription factor GTL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435698 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 5.2e-29
Identity = 90/137 (65.69%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 1   MEPPAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPS-SYE 60
           ME    GSG    S+LF V       PSLTVD  +SDSQ VEAASPISSRPPA  S +YE
Sbjct: 1   MEGVGGGSG----SELFGV------KPSLTVD-VVSDSQPVEAASPISSRPPASSSLNYE 60

Query: 61  ELIRLGGGGGAGHMVVDDD-----EADGRSG-GGSGGSGGNRWPRQETLALLKIRSEMDS 120
           ELIR     G G M +DDD     +A G SG GG GGS GNRWPRQETLALLKIRS+MDS
Sbjct: 61  ELIR-----GGGQMAIDDDALVGEDAGGGSGSGGGGGSAGNRWPRQETLALLKIRSDMDS 120

Query: 121 VFRDATLKGPLWDEVSR 131
            FRDATLKGPLWDEVSR
Sbjct: 121 AFRDATLKGPLWDEVSR 121

[Close]

BLAST of MELO3C000615 vs. TAIR 10
Match: AT1G33240.1 (GT-2-like 1 )

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20
Identity = 57/102 (55.88%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 38  SQQVEAASPISSRPPAVPSSYEELIR---------LGGGGGAGHMVVDDDEADGRSGGGS 97
           ++ VE ASPISSRPPA  ++ EEL+R         LGGGGG G             GG +
Sbjct: 10  NEVVEEASPISSRPPA--NNLEELMRFSAAADDGGLGGGGGGG------------GGGSA 69

Query: 98  GGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR 131
             S GNRWPR+ETLALL+IRS+MDS FRDATLK PLW+ VSR
Sbjct: 70  SSSSGNRWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSR 97

[Close]

BLAST of MELO3C000615 vs. TAIR 10
Match: AT1G76890.2 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 6.5e-16
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 67  GGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWD 126
           GGG G  V ++ +      G   GSGGNRWPR ETLALL+IRSEMD  FRD+TLK PLW+
Sbjct: 13  GGGVGGSVEEEKDMKMEETGEGAGSGGNRWPRPETLALLRIRSEMDKAFRDSTLKAPLWE 72

Query: 127 EVSR 131
           E+SR
Sbjct: 73  EISR 76

[Close]

BLAST of MELO3C000615 vs. TAIR 10
Match: AT1G76880.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.1e-14
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 90  GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR 131
           G GGNRWPRQETLALLKIRS+M   FRDA++KGPLW+EVSR
Sbjct: 56  GFGGNRWPRQETLALLKIRSDMGIAFRDASVKGPLWEEVSR 96

[Close]

BLAST of MELO3C000615 vs. TAIR 10
Match: AT5G03680.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 4.8e-11
Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 0


Query: 4   PAPGSGLPDPSQLFRVVSTPPPPPSLTVDTTISDSQQVEAASPISSRPPAVPSSYEELIR 63
           P+  S  P     F +    PPP  L   TT  D   +           +   +   L  
Sbjct: 29  PSTSSHFPSDFFGFNLAPVQPPPHRLHQFTTDQDMGFLPRGIHGLGGGSSTAGNNSNLNA 88

Query: 64  LGGGGGAGHMVVDDDEADGRSGGGSGGSGGNRWPRQETLALLKIRSEMDSVFRDATLKGP 123
              GGG G     D    G   GG GG G  RWPRQETL LL+IRS +D  F++A  KGP
Sbjct: 89  STSGGGVGFSGFLDGGGFGSGVGGDGG-GTGRWPRQETLTLLEIRSRLDHKFKEANQKGP 148

Query: 124 LWDEVSR 131
           LWDEVSR
Sbjct: 149 LWDEVSR 154

[Close]

BLAST of MELO3C000615 vs. TAIR 10
Match: AT3G10000.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-10
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0


Query: 79  EADGRSGGGSG---GSGGNRWPRQETLALLKIRSEMDSVFRDATLKGPLWDEVSR 131
           ++ G  GG SG   G G  RWPRQETL LL++RS +D  F++A  KGPLWDEVSR
Sbjct: 69  QSGGCVGGFSGFTDGGGTGRWPRQETLMLLEVRSRLDHKFKEANQKGPLWDEVSR 123

The following BLAST results are available for this feature:

BLAST of MELO3C000615 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042619.1	1.1e-62	98.48	trihelix transcription factor GTL1 isoform X2 [Cucumis melo var. makuwa] >TYK060...	[more]
XP_011654663.1	5.3e-60	95.45	trihelix transcription factor GTL1 isoform X2 [Cucumis sativus]	[more]
XP_011654662.1	5.3e-60	95.45	trihelix transcription factor GTL1 isoform X1 [Cucumis sativus] >KAE8647820.1 hy...	[more]
XP_038874539.1	4.2e-41	79.41	trihelix transcription factor GTL1-like isoform X1 [Benincasa hispida]	[more]
XP_038874540.1	4.2e-41	79.41	trihelix transcription factor GTL1-like isoform X2 [Benincasa hispida]	[more]

BLAST of MELO3C000615 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C882	2.1e-19	55.88	Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 ...	[more]
Q39117	9.1e-15	60.94	Trihelix transcription factor GT-2 OS=Arabidopsis thaliana OX=3702 GN=GT-2 PE=1 ...	[more]
Q9C6K3	8.5e-13	80.49	Trihelix transcription factor DF1 OS=Arabidopsis thaliana OX=3702 GN=DF1 PE=4 SV...	[more]
Q9LZS0	6.8e-10	38.58	Trihelix transcription factor PTL OS=Arabidopsis thaliana OX=3702 GN=PTL PE=1 SV...	[more]

BLAST of MELO3C000615 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMN2	5.5e-63	98.48	Trihelix transcription factor GTL1 isoform X2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1I2L2	1.8e-29	66.41	trihelix transcription factor GTL1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1I499	1.8e-29	66.41	trihelix transcription factor GTL1-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1ELD6	5.2e-29	65.69	trihelix transcription factor GTL1-like isoform X1 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1EQK5	5.2e-29	65.69	trihelix transcription factor GTL1-like isoform X2 OS=Cucurbita moschata OX=3662...	[more]

BLAST of MELO3C000615 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G33240.1	1.5e-20	55.88	GT-2-like 1	[more]
AT1G76890.2	6.5e-16	60.94	Duplicated homeodomain-like superfamily protein	[more]
AT1G76880.1	6.1e-14	80.49	Duplicated homeodomain-like superfamily protein	[more]
AT5G03680.1	4.8e-11	38.58	Duplicated homeodomain-like superfamily protein	[more]
AT3G10000.1	1.4e-10	58.18	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 96..130 e-value: 2.5E-9 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..98
None	No IPR available	PANTHER	PTHR21654:SF65	TRIHELIX TRANSCRIPTION FACTOR GT-2	coord: 30..130
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 30..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C000615.1	MELO3C000615.1	mRNA