Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCTAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCCTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAAATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTAGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATATCAGCCATCAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTTAG
mRNA sequence
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCTAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCCTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAAATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTAGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATATCAGCCATCAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTTAG
Coding sequence (CDS)
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCTAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCCTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAAATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTAGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATATCAGCCATCAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTTAG
Protein sequence
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPALAPAPAPAPAPPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Homology
BLAST of MELO.jh102455.1 vs. NCBI nr
Match:
TYK01613.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1238 bits (3202), Expect = 0.0
Identity = 632/642 (98.44%), Postives = 634/642 (98.75%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 228 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 287
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 288 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 347
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 348 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 407
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 408 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 467
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 468 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 527
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 528 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 587
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLRLTGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 588 TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 647
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 648 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 707
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 708 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 828 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 869
BLAST of MELO.jh102455.1 vs. NCBI nr
Match:
KAA0043391.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1237 bits (3201), Expect = 0.0
Identity = 633/642 (98.60%), Postives = 635/642 (98.91%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE
Sbjct: 300 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 359
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPA APA APAPAPAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 360 QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 419
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 420 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 479
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 480 QQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATEAARAD 539
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 540 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 599
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 600 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 659
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLRLTG AQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 660 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 719
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 720 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 779
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 780 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 839
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 840 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 899
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 900 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 941
BLAST of MELO.jh102455.1 vs. NCBI nr
Match:
KAA0053290.1 (gag protease polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 1225 bits (3169), Expect = 0.0
Identity = 625/642 (97.35%), Postives = 629/642 (97.98%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEV PVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEVHPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPAPAPA APA PAPAP PVPVAPQ+VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61 QQKPASPTPAPAPAPAPARVPAPAPAPVPVAPQLVPDQLSAEAKHLRDFRKYNPTTFDGS 120
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR STSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRDSTSGQKRKAEQQP 300
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFE GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFETGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLR+TGIAQNQGAG PHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGVPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVAHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642
BLAST of MELO.jh102455.1 vs. NCBI nr
Match:
KAA0054678.1 (gag protease polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 1224 bits (3166), Expect = 0.0
Identity = 626/642 (97.51%), Postives = 632/642 (98.44%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPAPAPA APAP PAPAP PVPVAPQ +PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 120
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA WETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTARWETTERMLGGDVSQITW 180
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVI VTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIGVTLIVLD 480
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTF+PPSMASFKFKGGGSKSLP+VISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFHPPSMASFKFKGGGSKSLPRVISAIRASKLL 540
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642
BLAST of MELO.jh102455.1 vs. NCBI nr
Match:
KAA0046014.1 (gag protease polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 1220 bits (3156), Expect = 0.0
Identity = 620/642 (96.57%), Postives = 629/642 (97.98%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKP SPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFD S
Sbjct: 61 QQKPVSPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDWS 120
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA+FMLT+RGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAIFMLTERGTAWWETTERMLGGDVSQITW 180
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDLTVEQYDAEFDMLSRFAPEMIATEAARAD 240
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRP THADALRL VDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPVTHADALRLVVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHL RCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLSRCLFGTRTCFKCRQEGH 360
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TAD+CPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADKCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEI+GHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEISGHVIEVTLIVLD 480
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 540
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642
BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match:
A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)
HSP 1 Score: 1238 bits (3202), Expect = 0.0
Identity = 632/642 (98.44%), Postives = 634/642 (98.75%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 228 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 287
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 288 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 347
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 348 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 407
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 408 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 467
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 468 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 527
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 528 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 587
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLRLTGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 588 TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 647
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 648 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 707
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 708 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 828 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 869
BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match:
A0A5A7TP96 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00630 PE=4 SV=1)
HSP 1 Score: 1237 bits (3201), Expect = 0.0
Identity = 633/642 (98.60%), Postives = 635/642 (98.91%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE
Sbjct: 300 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 359
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPA APA APAPAPAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 360 QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 419
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 420 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 479
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 480 QQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATEAARAD 539
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 540 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 599
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 600 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 659
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLRLTG AQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 660 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 719
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 720 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 779
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 780 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 839
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 840 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 899
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 900 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 941
BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match:
A0A5A7UDK9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001010 PE=4 SV=1)
HSP 1 Score: 1225 bits (3169), Expect = 0.0
Identity = 625/642 (97.35%), Postives = 629/642 (97.98%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEV PVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEVHPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPAPAPA APA PAPAP PVPVAPQ+VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61 QQKPASPTPAPAPAPAPARVPAPAPAPVPVAPQLVPDQLSAEAKHLRDFRKYNPTTFDGS 120
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR STSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRDSTSGQKRKAEQQP 300
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFE GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFETGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLR+TGIAQNQGAG PHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGVPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVAHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642
BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match:
A0A5A7UI54 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004990 PE=4 SV=1)
HSP 1 Score: 1224 bits (3166), Expect = 0.0
Identity = 626/642 (97.51%), Postives = 632/642 (98.44%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKPASPTPAPAPA APAP PAPAP PVPVAPQ +PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 120
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA WETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTARWETTERMLGGDVSQITW 180
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TADRCPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVI VTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIGVTLIVLD 480
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTF+PPSMASFKFKGGGSKSLP+VISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFHPPSMASFKFKGGGSKSLPRVISAIRASKLL 540
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642
BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match:
A0A5A7TSI1 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005780 PE=4 SV=1)
HSP 1 Score: 1220 bits (3156), Expect = 0.0
Identity = 620/642 (96.57%), Postives = 629/642 (97.98%), Query Frame = 0
Query: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60
Query: 61 QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
QQKP SPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFD S
Sbjct: 61 QQKPVSPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDWS 120
Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA+FMLT+RGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAIFMLTERGTAWWETTERMLGGDVSQITW 180
Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
QQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDLTVEQYDAEFDMLSRFAPEMIATEAARAD 240
Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
KFVRGLRLDIQGLVRAFRP THADALRL VDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPVTHADALRLVVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHL RCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLSRCLFGTRTCFKCRQEGH 360
Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
TAD+CPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADKCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEI+GHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEISGHVIEVTLIVLD 480
Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 540
Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BPI1 | 0.0 | 98.44 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... | [more] |
A0A5A7TP96 | 0.0 | 98.60 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold58... | [more] |
A0A5A7UDK9 | 0.0 | 97.35 | Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A5A7UI54 | 0.0 | 97.51 | Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A5A7TSI1 | 0.0 | 96.57 | Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
Match Name | E-value | Identity | Description | |