MELO.jh102455.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102455.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Gag protease polyprotein
Location	chr10: 6152276 .. 6154201 (-)
RNA-Seq Expression	MELO.jh102455.1
Synteny	MELO.jh102455.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCTAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCCTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAAATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTAGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATATCAGCCATCAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTTAG

mRNA sequence

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCTAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCCTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAAATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTAGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATATCAGCCATCAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTTAG

Coding sequence (CDS)

ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAACCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCCAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTTAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCCAGCGCTAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGCCAGTACCAGTTGCGCCCCAGGTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCAGAAAGTTCAGTGTGCTGTTTTCATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAACAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCTGCTAGTTTGAGAGATGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTATGATGCGGAGTTTGACATGTTATCCCACTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTCCGACTGGACATTCAGGGTTTGGTCCGAGCTTTCCGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAGTGCCACAGCGGAATTTCAGATCAGGTGGTGAGTTTCGCCGCTTCCAGCAGAAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCACCATCTGGGCCGTTGCTTATTCGGGACCAGGACTTGCTTTAAGTGCAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTCACGGGGATCGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTACGCTCCCAGTGTTGGGGCATTACGCCTTAGTTTTGTTTGATTCGGGTTCGTCACATTCTTTTATCTCCTCCGCATTTGTGTTGCATGCCCGCTTAGAGGTAGAGCCCTTACACCATGTTCTATCAGTATCTACTCCTTCCGGGGAATGTATGTTGTCGAAGGAAAAGGTGAAAGCATGCCAAATTGAGATAGCAGGCCATGTGATTGAAGTAACGCTGATAGTCCTGGATATGCTAGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCTAACCACGCCAGCATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATATCAGCCATCAGGGCCAGTAAACTGCTCAGTCAAGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGCCGATGTATCCCTGTCGTCAGAACCGGTGGTGAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTCGTTTAG

Protein sequence

MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPALAPAPAPAPAPPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV

Homology

[Close]

BLAST of MELO.jh102455.1 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1238 bits (3202), Expect = 0.0
Identity = 632/642 (98.44%), Postives = 634/642 (98.75%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 228 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 287

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 288 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 347

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 348 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 407

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 408 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 467

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 468 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 527

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 528 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 587

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLRLTGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 588 TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 647

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 648 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 707

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 708 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 828 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 869

[Close]

BLAST of MELO.jh102455.1 vs. NCBI nr
Match: KAA0043391.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1237 bits (3201), Expect = 0.0
Identity = 633/642 (98.60%), Postives = 635/642 (98.91%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE
Sbjct: 300 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 359

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPA APA APAPAPAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 360 QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 419

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 420 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 479

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 480 QQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATEAARAD 539

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 540 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 599

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 600 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 659

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLRLTG AQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 660 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 719

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 720 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 779

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 780 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 839

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 840 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 899

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 900 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 941

[Close]

BLAST of MELO.jh102455.1 vs. NCBI nr
Match: KAA0053290.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1225 bits (3169), Expect = 0.0
Identity = 625/642 (97.35%), Postives = 629/642 (97.98%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEV PVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVHPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPA APA  PAPAP PVPVAPQ+VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPARVPAPAPAPVPVAPQLVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR STSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRDSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFE GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFETGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLR+TGIAQNQGAG PHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGVPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVAHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642

[Close]

BLAST of MELO.jh102455.1 vs. NCBI nr
Match: KAA0054678.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1224 bits (3166), Expect = 0.0
Identity = 626/642 (97.51%), Postives = 632/642 (98.44%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPA APAP PAPAP PVPVAPQ +PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA WETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTARWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVI VTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIGVTLIVLD 480

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTF+PPSMASFKFKGGGSKSLP+VISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFHPPSMASFKFKGGGSKSLPRVISAIRASKLL 540

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642

[Close]

BLAST of MELO.jh102455.1 vs. NCBI nr
Match: KAA0046014.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1220 bits (3156), Expect = 0.0
Identity = 620/642 (96.57%), Postives = 629/642 (97.98%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKP SPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFD S
Sbjct: 61  QQKPVSPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDWS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA+FMLT+RGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAIFMLTERGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDLTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRP THADALRL VDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPVTHADALRLVVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHL RCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLSRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TAD+CPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADKCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEI+GHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEISGHVIEVTLIVLD 480

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642

[Close]

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1238 bits (3202), Expect = 0.0
Identity = 632/642 (98.44%), Postives = 634/642 (98.75%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 228 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 287

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 288 QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 347

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 348 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 407

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 408 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 467

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 468 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 527

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 528 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 587

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLRLTGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 588 TADRCPLRLTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 647

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 648 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 707

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 708 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 828 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 869

[Close]

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match: A0A5A7TP96 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00630 PE=4 SV=1)

HSP 1 Score: 1237 bits (3201), Expect = 0.0
Identity = 633/642 (98.60%), Postives = 635/642 (98.91%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE
Sbjct: 300 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 359

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPA APA APAPAPAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 360 QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 419

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 420 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 479

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLN+EQG+MTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 480 QQFKESFYAKFFSASLRDAKRQEFLNIEQGEMTVEQYDAEFDMLSRFAPEMIATEAARAD 539

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Sbjct: 540 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGLTSGQKRKAEQQP 599

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 600 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 659

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLRLTG AQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 660 TADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 719

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 720 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 779

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 780 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 839

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 840 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 899

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 900 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 941

[Close]

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match: A0A5A7UDK9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001010 PE=4 SV=1)

HSP 1 Score: 1225 bits (3169), Expect = 0.0
Identity = 625/642 (97.35%), Postives = 629/642 (97.98%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEV PVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVHPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPA APA  PAPAP PVPVAPQ+VPDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPARVPAPAPAPVPVAPQLVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGR STSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRDSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFE GEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFETGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLR+TGIAQNQGAG PHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGVPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVAHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLA NHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAVNHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642

[Close]

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match: A0A5A7UI54 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004990 PE=4 SV=1)

HSP 1 Score: 1224 bits (3166), Expect = 0.0
Identity = 626/642 (97.51%), Postives = 632/642 (98.44%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKPASPTPAPAPA APAP PAPAP PVPVAPQ +PDQLSAEAKHLRDFRKYNPTTFDGS
Sbjct: 61  QQKPASPTPAPAPAPAPAPVPAPAPAPVPVAPQFMPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTA WETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTARWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TADRCPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADRCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVI VTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIGVTLIVLD 480

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTF+PPSMASFKFKGGGSKSLP+VISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFHPPSMASFKFKGGGSKSLPRVISAIRASKLL 540

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642

[Close]

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL
Match: A0A5A7TSI1 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005780 PE=4 SV=1)

HSP 1 Score: 1220 bits (3156), Expect = 0.0
Identity = 620/642 (96.57%), Postives = 629/642 (97.98%), Query Frame = 0


Query: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60
           MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRD+IMQMRE
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDMIMQMRE 60

Query: 61  QQKPASPTPAPAPALAPAPAPAPAP-PVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGS 120
           QQKP SPTPAPAPA APAP PAPAP PVPVAPQ VPDQLSAEAKHLRDFRKYNPTTFD S
Sbjct: 61  QQKPVSPTPAPAPAPAPAPVPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDWS 120

Query: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180
           LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA+FMLT+RGTAWWETTERMLGGDVSQITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAIFMLTERGTAWWETTERMLGGDVSQITW 180

Query: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATEAARAD 240
           QQFKESFYAKFFSASLRDAKRQEFLNLEQGD+TVEQYDAEFDMLS FAPEMIATEAARAD
Sbjct: 181 QQFKESFYAKFFSASLRDAKRQEFLNLEQGDLTVEQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300
           KFVRGLRLDIQGLVRAFRP THADALRL VDLSLQERANSSKTAGRGSTSGQKRKAEQQP
Sbjct: 241 KFVRGLRLDIQGLVRAFRPVTHADALRLVVDLSLQERANSSKTAGRGSTSGQKRKAEQQP 300

Query: 301 VPVPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGH 360
           VPVPQRNFR GGEFR FQQKPFEAGEAARGKPLCTTCGKHHL RCLFGTRTCFKCRQEGH
Sbjct: 301 VPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPLCTTCGKHHLSRCLFGTRTCFKCRQEGH 360

Query: 361 TADRCPLRLTGIAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420
           TAD+CPLR+TGIAQNQGAGAPHQGRVFATN+TEAEKAGTVVTGTLPVLGHYALVLFDSGS
Sbjct: 361 TADKCPLRVTGIAQNQGAGAPHQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGS 420

Query: 421 SHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIAGHVIEVTLIVLD 480
           SHSFISSAFV HARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEI+GHVIEVTLIVLD
Sbjct: 421 SHSFISSAFVSHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEISGHVIEVTLIVLD 480

Query: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 540
           MLDFDVILGMDWLAANHASIDCSRKEVTFNPPS+ASFKFKGGGSKSLPQVISAIRASKLL
Sbjct: 481 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSLASFKFKGGGSKSLPQVISAIRASKLL 540

Query: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600
           SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 541 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 600

Query: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 641
           SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV
Sbjct: 601 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV 642

The following BLAST results are available for this feature:

BLAST of MELO.jh102455.1 vs. NCBI nr


Match Name	Identity	Description
TYK01613.1	98.44	pol protein [Cucumis melo var. makuwa]	[more]
KAA0043391.1	98.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053290.1	97.35	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0054678.1	97.51	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0046014.1	96.57	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102455.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A5D3BPI1	98.44	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7TP96	98.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold58...	[more]
A0A5A7UDK9	97.35	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7UI54	97.51	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7TSI1	96.57	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of MELO.jh102455.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 385..517 e-value: 6.0E-23 score: 83.1
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 404..500
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 579..641 e-value: 2.0E-16 score: 62.1
None	No IPR available	PFAM	PF08284	RVP_2	coord: 382..510 e-value: 1.6E-43 score: 147.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..312
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	PANTHER	PTHR24559:SF330	RNA-DIRECTED DNA POLYMERASE HOMOLOG	coord: 401..641
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 401..641
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 433..493 e-value: 1.42225E-12 score: 61.9688
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 150..246 e-value: 2.1E-15 score: 56.8
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 413..424
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 351..365 score: 9.438442
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 347..371
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 565..641

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102455.1.t1	MELO.jh102455.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding