MELO.jh102046.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh102046.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Reverse transcriptase
Location	chr07: 14427419 .. 14427901 (+)
RNA-Seq Expression	MELO.jh102046.1
Synteny	MELO.jh102046.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTTCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGAGACTGCGTGAACTCCCGTGGCCGGAATGAAGTGGGAGAGCGGAAGTTAGTAGTCCCGAGTTGGTCAGATTACGACAAACAATATTAA

mRNA sequence

ATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTTCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGAGACTGCGTGAACTCCCGTGGCCGGAATGAAGTGGGAGAGCGGAAGTTAGTAGTCCCGAGTTGGTCAGATTACGACAAACAATATTAA

Coding sequence (CDS)

ATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTTCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGAGACTGCGTGAACTCCCGTGGCCGGAATGAAGTGGGAGAGCGGAAGTTAGTAGTCCCGAGTTGGTCAGATTACGACAAACAATATTAA

Protein sequence

MGNSRQTHQDDTIIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGDCVNSRGRNEVGERKLVVPSWSDYDKQY

Homology

[Close]

BLAST of MELO.jh102046.1 vs. NCBI nr
Match: KAA0035809.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (647), Expect = 5.22e-81
Identity = 127/139 (91.37%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF
Sbjct: 94  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 153

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQ +RTIQTLEDMLRACV+QLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 
Sbjct: 154 HPQTDGQSKRTIQTLEDMLRACVVQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 213

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 214 PCRTLVCWNEVGERKLVGP 232

[Close]

BLAST of MELO.jh102046.1 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (655), Expect = 2.61e-79
Identity = 129/139 (92.81%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF
Sbjct: 303 IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 362

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 
Sbjct: 363 HPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 422

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 423 PCRTPVCWNEVGERKLVGP 441

[Close]

BLAST of MELO.jh102046.1 vs. NCBI nr
Match: KAA0042136.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 240 bits (613), Expect = 1.04e-78
Identity = 121/135 (89.63%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 18  MTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQT 77
           MTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK MGTGLKFSTSFHPQ 
Sbjct: 1   MTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMGTGLKFSTSFHPQI 60

Query: 78  DGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-DCVN 137
           DGQ ERTIQTLEDMLRACVLQLKG WDTHLPLMEF YNNNYQSSIGMAPYEALYG  C  
Sbjct: 61  DGQSERTIQTLEDMLRACVLQLKGIWDTHLPLMEFPYNNNYQSSIGMAPYEALYGRPCRT 120

Query: 138 SRGRNEVGERKLVVP 151
               NEVGERKLV P
Sbjct: 121 LVCWNEVGERKLVGP 135

[Close]

BLAST of MELO.jh102046.1 vs. NCBI nr
Match: TYK05698.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (622), Expect = 3.85e-78
Identity = 124/139 (89.21%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIK TSTLDQLARLYV KIV+QY VPVSIVSDRDPRFTSKFWPSLQKAM TGLKFSTSF
Sbjct: 31  IPIKATSTLDQLARLYVYKIVNQYEVPVSIVSDRDPRFTSKFWPSLQKAMRTGLKFSTSF 90

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSI MAPYEALYG 
Sbjct: 91  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIDMAPYEALYGR 150

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 151 PCRTPVCWNEVGERKLVGP 169

[Close]

BLAST of MELO.jh102046.1 vs. NCBI nr
Match: TYK11053.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (655), Expect = 8.03e-78
Identity = 129/139 (92.81%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF
Sbjct: 481 IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 540

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 
Sbjct: 541 HPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 600

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 601 PCRTPVCWNEVGERKLVGP 619

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 13   IIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTS 72
            ++P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  
Sbjct: 1017 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1076

Query: 73   FHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 132
            + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN   S+  M P+E ++ 
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH- 1136

Query: 133  DCVNSRGRNEVGERKLVVPSWSD 156
                   R       L +PS+SD
Sbjct: 1137 -------RYSPALSPLELPSFSD 1151

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 13   IIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTS 72
            ++P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  
Sbjct: 1017 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1076

Query: 73   FHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 132
            + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN   S+  M P+E ++ 
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH- 1136

Query: 133  DCVNSRGRNEVGERKLVVPSWSD 156
                   R       L +PS+SD
Sbjct: 1137 -------RYSPALSPLELPSFSD 1151

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 13   IIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTS 72
            ++P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  
Sbjct: 1017 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1076

Query: 73   FHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 132
            + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN   S+  M P+E ++ 
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH- 1136

Query: 133  DCVNSRGRNEVGERKLVVPSWSD 156
                   R       L +PS+SD
Sbjct: 1137 -------RYSPALSPLELPSFSD 1151

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 13   IIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTS 72
            ++P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  
Sbjct: 1017 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1076

Query: 73   FHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 132
            + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN   S+  M P+E ++ 
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH- 1136

Query: 133  DCVNSRGRNEVGERKLVVPSWSD 156
                   R       L +PS+SD
Sbjct: 1137 -------RYSPALSPLELPSFSD 1151

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 13   IIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTS 72
            ++P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  
Sbjct: 1017 LVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLP 1076

Query: 73   FHPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 132
            + PQTDGQ ERT QT+E +LR        +W  H+ L++ +YNN   S+  M P+E ++ 
Sbjct: 1077 YRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH- 1136

Query: 133  DCVNSRGRNEVGERKLVVPSWSD 156
                   R       L +PS+SD
Sbjct: 1137 -------RYSPALSPLELPSFSD 1151

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL
Match: A0A5A7T343 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00990 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 2.53e-81
Identity = 127/139 (91.37%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF
Sbjct: 94  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 153

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQ +RTIQTLEDMLRACV+QLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 
Sbjct: 154 HPQTDGQSKRTIQTLEDMLRACVVQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 213

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 214 PCRTLVCWNEVGERKLVGP 232

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL
Match: A0A5A7UGA0 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00360 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 1.26e-79
Identity = 129/139 (92.81%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF
Sbjct: 303 IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 362

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 
Sbjct: 363 HPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 422

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 423 PCRTPVCWNEVGERKLVGP 441

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL
Match: A0A5A7TJI5 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G006240 PE=4 SV=1)

HSP 1 Score: 240 bits (613), Expect = 5.06e-79
Identity = 121/135 (89.63%), Postives = 121/135 (89.63%), Query Frame = 0


Query: 18  MTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQT 77
           MTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQK MGTGLKFSTSFHPQ 
Sbjct: 1   MTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKTMGTGLKFSTSFHPQI 60

Query: 78  DGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-DCVN 137
           DGQ ERTIQTLEDMLRACVLQLKG WDTHLPLMEF YNNNYQSSIGMAPYEALYG  C  
Sbjct: 61  DGQSERTIQTLEDMLRACVLQLKGIWDTHLPLMEFPYNNNYQSSIGMAPYEALYGRPCRT 120

Query: 138 SRGRNEVGERKLVVP 151
               NEVGERKLV P
Sbjct: 121 LVCWNEVGERKLVGP 135

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL
Match: A0A5D3C3B3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001790 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.86e-78
Identity = 124/139 (89.21%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIK TSTLDQLARLYV KIV+QY VPVSIVSDRDPRFTSKFWPSLQKAM TGLKFSTSF
Sbjct: 31  IPIKATSTLDQLARLYVYKIVNQYEVPVSIVSDRDPRFTSKFWPSLQKAMRTGLKFSTSF 90

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSI MAPYEALYG 
Sbjct: 91  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIDMAPYEALYGR 150

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 151 PCRTPVCWNEVGERKLVGP 169

[Close]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL
Match: A0A5D3CGM7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00360 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 3.89e-78
Identity = 129/139 (92.81%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 14  IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 73
           IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF
Sbjct: 481 IPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSF 540

Query: 74  HPQTDGQFERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG- 133
           HPQTDGQ ERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG 
Sbjct: 541 HPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGR 600

Query: 134 DCVNSRGRNEVGERKLVVP 151
            C      NEVGERKLV P
Sbjct: 601 PCRTPVCWNEVGERKLVGP 619

The following BLAST results are available for this feature:

BLAST of MELO.jh102046.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035809.1	5.22e-81	91.37	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0053246.1	2.61e-79	92.81	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0042136.1	1.04e-78	89.63	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK05698.1	3.85e-78	89.21	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK11053.1	8.03e-78	92.81	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh102046.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.7e-18	32.87	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.7e-18	32.87	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.7e-18	32.87	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.7e-18	32.87	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.7e-18	32.87	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T343	2.53e-81	91.37	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UGA0	1.26e-79	92.81	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7TJI5	5.06e-79	89.63	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3C3B3	1.86e-78	89.21	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98...	[more]
A0A5D3CGM7	3.89e-78	92.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73...	[more]

BLAST of MELO.jh102046.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 7..148 e-value: 7.5E-34 score: 118.7
None	No IPR available	PANTHER	PTHR46148:SF39	SUBFAMILY NOT NAMED	coord: 38..132
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 38..132
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 24..134 score: 13.735866
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 14..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh102046.1.t1	MELO.jh102046.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding