MELO.jh033030.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTCATCTCCAACACTTGCACTATCTTTGCTAATTTTCTTTTTATGTAACATACGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCGTCAACCAAATTGAATACGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACTTAGGAGTCCATGTCCTTCCGCTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGAAAATGCACCACATGCAGATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGATATATGCTATAACTACGGAGATAAGGAGCCAAGCATTGTGTAA ATGGGCTCATCTCCAACACTTGCACTATCTTTGCTAATTTTCTTTTTATGTAACATACGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCGTCAACCAAATTGAATACGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACTTAGGAGTCCATGTCCTTCCGCTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGAAAATGCACCACATGCAGATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGATATATGCTATAACTACGGAGATAAGGAGCCAAGCATTGTGTAA ATGGGCTCATCTCCAACACTTGCACTATCTTTGCTAATTTTCTTTTTATGTAACATACGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCGTCAACCAAATTGAATACGGCATTCCTGTCACCGTTCACTGCAAATCCAAGAACGATGACTTAGGAGTCCATGTCCTTCCGCTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACATTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATATCTTTGACGACAAAAGGGATGCAGGAAAATGCACCACATGCAGATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGATATATGCTATAACTACGGAGATAAGGAGCCAAGCATTGTGTAA MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYSMCLQDPKNPGKDICYNYGDKEPSIV Homology
BLAST of MELO.jh033030.1 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 311 bits (796), Expect = 4.73e-107 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. NCBI nr
Match: KAA0059246.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (790), Expect = 3.90e-106 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (788), Expect = 7.87e-106 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. NCBI nr
Match: TYK14097.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (788), Expect = 7.87e-106 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. NCBI nr
Match: KAA0050579.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (788), Expect = 7.87e-106 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.5e-21 Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.7e-20 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18 Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.4e-18 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.1e-14 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1) HSP 1 Score: 311 bits (796), Expect = 2.29e-107 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy TrEMBL
Match: A0A5A7UYG6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001800 PE=3 SV=1) HSP 1 Score: 308 bits (790), Expect = 1.89e-106 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1) HSP 1 Score: 308 bits (788), Expect = 3.81e-106 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy TrEMBL
Match: A0A5A7UAQ6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G00390 PE=3 SV=1) HSP 1 Score: 308 bits (788), Expect = 3.81e-106 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1) HSP 1 Score: 308 bits (788), Expect = 3.81e-106 Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 101.3 bits (251), Expect = 6.8e-22 Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 92.4 bits (228), Expect = 3.1e-19 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of MELO.jh033030.1 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 84.3 bits (207), Expect = 8.6e-17 Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|