MELO.jh016098.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh016098.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	cellulose synthase-like protein G3
Location	chr07: 22094609 .. 22095235 (-)
RNA-Seq Expression	MELO.jh016098.1
Synteny	MELO.jh016098.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGGAACTATGGGCGGCTCCACCACACCACCACCTCCACCCTCGCCACCTCACTCCTCTTACTCTTCTCATTTCATCACCGCTTTCAACCGTCTCTTTGCCGCTGTCTACGCCGCCGCAATTTTAGCACTCTTCTATCACCACATCCTTTCCATTCTTCGAAATTCCTCCATTTCATCTTCCTTAATCTCACTTGCCCTACTCGTAGCCGATTTCATTTTGGCCTTTATGTGGGTTGCGGGGCAATCTTTTCGGATGATCCCCGTCCGCCGTCGAGAGTTTCCAGAGAAATTGAAACGGCTAGCAGAGGAGGATTTCGATTTTCCGGCGGTTGATGTGTTTATTTGCACGACGGATCCTGACAAGGAGCCGCCGATGAGCGTGGTAAACTCGGTATTATCAGTTGGGAAGATCTCCGTCTATATCTCCGACGACGGCGGCGGCGAAGTTCGCTAGACATTGGGTGCCGTTTTGCAAGAAAAACGACGTCGTGGAGAGGAATCCCGAGGCGTTTTTTGCATCTACTAATAATGAGTTTTTGGAATTTTGATACAGACAAGATTAGGGTAATTAATTAATGTTTTTTCTCCTCTCTTCTTCTAATGGAAAATTATTCATTGTTTTTAA

mRNA sequence

GACGGAACTATGGGCGGCTCCACCACACCACCACCTCCACCCTCGCCACCTCACTCCTCTTACTCTTCTCATTTCATCACCGCTTTCAACCGTCTCTTTGCCGCTGTCTACGCCGCCGCAATTTTAGCACTCTTCTATCACCACATCCTTTCCATTCTTCGAAATTCCTCCATTTCATCTTCCTTAATCTCACTTGCCCTACTCGTAGCCGATTTCATTTTGGCCTTTATGTGGGTTGCGGGGCAATCTTTTCGGATGATCCCCGTCCGCCGTCGAGAGTTTCCAGAGAAATTGAAACGGCTAGCAGAGGAGGATTTCGATTTTCCGGCGGTTGATGTGTTTATTTGCACGACGGATCCTGACAAGGAGCCGCCGATGAGCGTGGTAAACTCGGTATTATCAGTTGGGAAGATCTCCGTCTATATCTCCGACGACGGCGGCGGCGAAGTTCGCTAGACATTGGGTGCCGTTTTGCAAGAAAAACGACGTCGTGGAGAGGAATCCCGAGGCGTTTTTTGCATCTACTAATAATGAGTTTTTGGAATTTTGATACAGACAAGATTAGGGTAATTAATTAATGTTTTTTCTCCTCTCTTCTTCTAATGGAAAATTATTCATTGTTTTTAA

Coding sequence (CDS)

ATGGGCGGCTCCACCACACCACCACCTCCACCCTCGCCACCTCACTCCTCTTACTCTTCTCATTTCATCACCGCTTTCAACCGTCTCTTTGCCGCTGTCTACGCCGCCGCAATTTTAGCACTCTTCTATCACCACATCCTTTCCATTCTTCGAAATTCCTCCATTTCATCTTCCTTAATCTCACTTGCCCTACTCGTAGCCGATTTCATTTTGGCCTTTATGTGGGTTGCGGGGCAATCTTTTCGGATGATCCCCGTCCGCCGTCGAGAGTTTCCAGAGAAATTGAAACGGCTAGCAGAGGAGGATTTCGATTTTCCGGCGGTTGATGTGTTTATTTGCACGACGGATCCTGACAAGGAGCCGCCGATGAGCGTGGTAAACTCGGTATTATCAGTTGGGAAGATCTCCGTCTATATCTCCGACGACGGCGGCGGCGAAGTTCGCTAG

Protein sequence

MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSVGKISVYISDDGGGEVR

Homology

[Close]

BLAST of MELO.jh016098.1 vs. NCBI nr
Match: KAA0044940.1 (cellulose synthase-like protein G3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 287 bits (735), Expect = 1.20e-97
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSVGKISVYISDDGGGEVR 148
           PPMSVVNSVLSVGKISVYISDDGGGEVR
Sbjct: 121 PPMSVVNSVLSVGKISVYISDDGGGEVR 148

[Close]

BLAST of MELO.jh016098.1 vs. NCBI nr
Match: KAA0044939.1 (cellulose synthase-like protein G3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (686), Expect = 6.18e-83
Identity = 143/151 (94.70%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNSVLSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSVLSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. NCBI nr
Match: XP_016901156.1 (PREDICTED: cellulose synthase-like protein G3 [Cucumis melo])

HSP 1 Score: 268 bits (686), Expect = 6.42e-83
Identity = 143/151 (94.70%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNSVLSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSVLSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. NCBI nr
Match: XP_008451921.1 (PREDICTED: cellulose synthase-like protein G3 isoform X3 [Cucumis melo])

HSP 1 Score: 267 bits (682), Expect = 9.54e-83
Identity = 142/151 (94.04%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNS LSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSALSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. NCBI nr
Match: XP_016901133.1 (PREDICTED: cellulose synthase-like protein G3 isoform X2 [Cucumis melo])

HSP 1 Score: 267 bits (682), Expect = 2.14e-82
Identity = 142/151 (94.04%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNS LSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSALSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy Swiss-Prot
Match: Q0WVN5 (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana OX=3702 GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 5.5e-24
Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R++A  +   I+AL YHH+ S+L   + +++LI+  LL++D +LAFMW    S R  PVR
Sbjct: 46  RIYAVFHTCGIIALMYHHVHSLL---TANTTLITSLLLLSDIVLAFMWATTTSLRYKPVR 105

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R E+PEK    A E  DFP +DVFICT DP KEPPM VVN+ LSV        KISVY+S
Sbjct: 106 RTEYPEK---YAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVS 165

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy Swiss-Prot
Match: Q8VYR4 (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana OX=3702 GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.7e-23
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R++A  +   I+AL YHH+ SI+   + +++LI+  LL++D +LAFMW    S R+ P+ 
Sbjct: 24  RIYAVFHTCGIIALMYHHVHSIV---NANNTLITCLLLLSDIVLAFMWATTTSLRLNPIH 83

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R E+PEK    A +  DFP +DVFICT DP KEPPM VVN+ LSV        KISVY+S
Sbjct: 84  RTEYPEK---YAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVS 143

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy Swiss-Prot
Match: Q570S7 (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana OX=3702 GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-22
Identity = 61/127 (48.03%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R++A  +   I+AL YHH+ S++   + +++LI+  LL++D +LAFMW    S R+ PV 
Sbjct: 27  RIYAIFHTCGIIALMYHHVHSLV---TANNTLITCLLLLSDIVLAFMWATTTSLRLNPVH 86

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R E PEK    A +  DFP +DVFICT DP KEPPM VVN+ LSV        KISVY+S
Sbjct: 87  RTECPEK---YAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVS 146

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy Swiss-Prot
Match: Q651X6 (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.8e-14
Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 25  AFNRLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMI 84
           A  RL AA  AA IL + Y+    +       ++ + +A   A+   A  WV  QS R  
Sbjct: 21  AVYRLQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMA--AAELWFAVYWVITQSVRWC 80

Query: 85  PVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISV 144
           PVRRR F  +L    +E  + P VDVF+CT DP  EPP  V++++LSV        KISV
Sbjct: 81  PVRRRTFKNRLAERYKE--NLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISV 140

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy Swiss-Prot
Match: Q651X7 (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSLE1 PE=2 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 3.3e-13
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 25  AFNRLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMI 84
           A  R+ AA  AA IL + Y+    +       ++ + +A   A+   A  WV  QS R  
Sbjct: 26  AVYRVQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMA--AAELWFAVYWVIAQSVRWR 85

Query: 85  PVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISV 144
           P RRR F ++L    E+  + P VD+F+CT DP  EPP  V++++LSV        KISV
Sbjct: 86  PFRRRTFRDRLAERYEQ--NLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISV 145

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy TrEMBL
Match: A0A5A7TP17 (Cellulose synthase-like protein G3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002410 PE=4 SV=1)

HSP 1 Score: 287 bits (735), Expect = 5.80e-98
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSVGKISVYISDDGGGEVR 148
           PPMSVVNSVLSVGKISVYISDDGGGEVR
Sbjct: 121 PPMSVVNSVLSVGKISVYISDDGGGEVR 148

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy TrEMBL
Match: A0A5A7TUM0 (Cellulose synthase-like protein G3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002380 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 2.99e-83
Identity = 143/151 (94.70%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNSVLSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSVLSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy TrEMBL
Match: A0A1S4DYU2 (cellulose synthase-like protein G3 OS=Cucumis melo OX=3656 GN=LOC103493075 PE=4 SV=1)

HSP 1 Score: 268 bits (686), Expect = 3.11e-83
Identity = 143/151 (94.70%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNSVLSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSVLSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy TrEMBL
Match: A0A1S3BS15 (cellulose synthase-like protein G3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107990296 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 4.62e-83
Identity = 142/151 (94.04%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNS LSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSALSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. ExPASy TrEMBL
Match: A0A1S4DYT1 (cellulose synthase-like protein G3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990296 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 1.04e-82
Identity = 142/151 (94.04%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MGGSTTPPPPPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60
           MGGSTTPPPPPSP HSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI
Sbjct: 1   MGGSTTPPPPPSPLHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLI 60

Query: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120
           SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE
Sbjct: 61  SLALLVADFILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKE 120

Query: 121 PPMSVVNSVLSV-------GKISVYISDDGG 144
           PPMSVVNS LSV       GKISVYISDDGG
Sbjct: 121 PPMSVVNSALSVMAYDYPVGKISVYISDDGG 151

[Close]

BLAST of MELO.jh016098.1 vs. TAIR 10
Match: AT4G23990.1 (cellulose synthase like G3 )

HSP 1 Score: 112.1 bits (279), Expect = 3.9e-25
Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R++A  +   I+AL YHH+ S+L   + +++LI+  LL++D +LAFMW    S R  PVR
Sbjct: 46  RIYAVFHTCGIIALMYHHVHSLL---TANTTLITSLLLLSDIVLAFMWATTTSLRYKPVR 105

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R E+PEK    A E  DFP +DVFICT DP KEPPM VVN+ LSV        KISVY+S
Sbjct: 106 RTEYPEK---YAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVS 165

[Close]

BLAST of MELO.jh016098.1 vs. TAIR 10
Match: AT4G24000.1 (cellulose synthase like G2 )

HSP 1 Score: 109.0 bits (271), Expect = 3.3e-24
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R++A  +   I+AL YHH+ SI+   + +++LI+  LL++D +LAFMW    S R+ P+ 
Sbjct: 24  RIYAVFHTCGIIALMYHHVHSIV---NANNTLITCLLLLSDIVLAFMWATTTSLRLNPIH 83

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R E+PEK    A +  DFP +DVFICT DP KEPPM VVN+ LSV        KISVY+S
Sbjct: 84  RTEYPEK---YAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVS 143

[Close]

BLAST of MELO.jh016098.1 vs. TAIR 10
Match: AT4G24010.1 (cellulose synthase like G1 )

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-23
Identity = 61/127 (48.03%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R++A  +   I+AL YHH+ S++   + +++LI+  LL++D +LAFMW    S R+ PV 
Sbjct: 27  RIYAIFHTCGIIALMYHHVHSLV---TANNTLITCLLLLSDIVLAFMWATTTSLRLNPVH 86

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R E PEK    A +  DFP +DVFICT DP KEPPM VVN+ LSV        KISVY+S
Sbjct: 87  RTECPEK---YAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVS 146

[Close]

BLAST of MELO.jh016098.1 vs. TAIR 10
Match: AT1G55850.1 (cellulose synthase like E1 )

HSP 1 Score: 75.5 bits (184), Expect = 4.1e-14
Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 28  RLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADFILAFMWVAGQSFRMIPVR 87
           R F+A     I  ++++ I  I  N ++   LI   + + +      WV  QS R  PV 
Sbjct: 33  RFFSASVFVCICLIWFYRIGEIGDNRTVLDRLIWFVMFIVEIWFGLYWVVTQSSRWNPVW 92

Query: 88  RREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSVLSV-------GKISVYIS 147
           R  F ++L R      D P +DVF+CT DP  EPP+ VVN+VLSV        K++VY+S
Sbjct: 93  RFPFSDRLSR--RYGSDLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLS 152

[Close]

BLAST of MELO.jh016098.1 vs. TAIR 10
Match: AT2G32620.1 (cellulose synthase-like B )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 0


Query: 10  PPSPPHSSYSSHFITAFNRLFAAVYAAAILALFYHHILSILRNSSISSSLISLALLVADF 69
           PP   + SY S+ + A +     +    + +L  H IL + +N      +I L   + + 
Sbjct: 9   PPLYENISYKSYILRAVDLTILGL----LFSLLLHRILYMSQN-----GIIWLVAFLCES 68

Query: 70  ILAFMWVAGQSFRMIPVRRREFPEKLKRLAEEDFDFPAVDVFICTTDPDKEPPMSVVNSV 129
             +F+W+     +  P   + +P+   RL E  +D P+VD+F+ T DP +EPP+ VVN+V
Sbjct: 69  CFSFVWLLSTCTKWSPAETKPYPD---RLDERVYDLPSVDMFVPTADPVREPPIMVVNTV 128

Query: 130 LSV-------GKISVYISDDG 144
           LS+        K++ Y+SDDG
Sbjct: 129 LSLLAVNYPANKLACYVSDDG 137

The following BLAST results are available for this feature:

BLAST of MELO.jh016098.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044940.1	1.20e-97	100.00	cellulose synthase-like protein G3 isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0044939.1	6.18e-83	94.70	cellulose synthase-like protein G3 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016901156.1	6.42e-83	94.70	PREDICTED: cellulose synthase-like protein G3 [Cucumis melo]	[more]
XP_008451921.1	9.54e-83	94.04	PREDICTED: cellulose synthase-like protein G3 isoform X3 [Cucumis melo]	[more]
XP_016901133.1	2.14e-82	94.04	PREDICTED: cellulose synthase-like protein G3 isoform X2 [Cucumis melo]	[more]

BLAST of MELO.jh016098.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WVN5	5.5e-24	50.39	Cellulose synthase-like protein G3 OS=Arabidopsis thaliana OX=3702 GN=CSLG3 PE=2...	[more]
Q8VYR4	4.7e-23	48.03	Cellulose synthase-like protein G2 OS=Arabidopsis thaliana OX=3702 GN=CSLG2 PE=2...	[more]
Q570S7	2.3e-22	48.03	Cellulose synthase-like protein G1 OS=Arabidopsis thaliana OX=3702 GN=CSLG1 PE=2...	[more]
Q651X6	8.8e-14	40.94	Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q651X7	3.3e-13	38.58	Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]

BLAST of MELO.jh016098.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP17	5.80e-98	100.00	Cellulose synthase-like protein G3 isoform X2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TUM0	2.99e-83	94.70	Cellulose synthase-like protein G3 isoform X1 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S4DYU2	3.11e-83	94.70	cellulose synthase-like protein G3 OS=Cucumis melo OX=3656 GN=LOC103493075 PE=4 ...	[more]
A0A1S3BS15	4.62e-83	94.04	cellulose synthase-like protein G3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC1079...	[more]
A0A1S4DYT1	1.04e-82	94.04	cellulose synthase-like protein G3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1079...	[more]

BLAST of MELO.jh016098.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23990.1	3.9e-25	50.39	cellulose synthase like G3	[more]
AT4G24000.1	3.3e-24	48.03	cellulose synthase like G2	[more]
AT4G24010.1	1.6e-23	48.03	cellulose synthase like G1	[more]
AT1G55850.1	4.1e-14	37.80	cellulose synthase like E1	[more]
AT2G32620.1	1.6e-10	30.50	cellulose synthase-like B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005150	Cellulose synthase	PFAM	PF03552	Cellulose_synt	coord: 108..145 e-value: 1.7E-6 score: 26.8
None	No IPR available	PANTHER	PTHR13301	X-BOX TRANSCRIPTION FACTOR-RELATED	coord: 18..147
None	No IPR available	PANTHER	PTHR13301:SF41	CELLULOSE SYNTHASE-LIKE PROTEIN G3	coord: 18..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh016098.1.t1	MELO.jh016098.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0016760	cellulose synthase (UDP-forming) activity