MELO.jh012387.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh012387.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr06: 4380217 .. 4380943 (-)
RNA-Seq Expression	MELO.jh012387.1
Synteny	MELO.jh012387.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGGGACCAAGATCAAAACCAACACAAATCCTTTGCTCTTTCTAATATTCCCTCTACATGAAGTGAAAGACATTTTCCCTCCACTTCTCTTCTCCAAATGGGGTGGCTCCAATCCCTATTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGTAAGTCACTTCCCTTTCCGAACTCAGTTTCATTTAGTCACTTGCATTCTCTGTTTCTCTCTTTTTGCCTTCTACAATGCCACCATTTCCCCTTCTCTTTCTGTTCTTTCACTTGAAAATTGTGCAGGAAAGAAAAGAATCTCTTCAAAATGCTTTGAAGTTCAAGTTCTTTCTTTTTTTTTGGTTCATAGTTTTTGGGTAAATTTGATGCAGGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAACAATGAAGCTTTCAAGTTTCATCATCCTAAATACACAATTTCTCCACCAATGTACATAAAATATTTATAATACTTTATATATTTGAAGGGGGCGAAATAATGCCCAGAAATAAAAGTTTTCCTTCCCCATTTTCATCTCTTTTTTTTTCTCTCTTGTTCTAAATTTTTGTGTAGCTTCTTACAGTTCCTTTGTCCTAATCAGCAGTTGAGGCGGCAGTTGAATTCTAAATTCTAT

mRNA sequence

AAGAGGGACCAAGATCAAAACCAACACAAATCCTTTGCTCTTTCTAATATTCCCTCTACATGAAGTGAAAGACATTTTCCCTCCACTTCTCTTCTCCAAATGGGGTGGCTCCAATCCCTATTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAACAATGAAGCTTTCAAGTTTCATCATCCTAAATACACAATTTCTCCACCAATGTACATAAAATATTTATAATACTTTATATATTTGAAGGGGGCGAAATAATGCCCAGAAATAAAAGTTTTCCTTCCCCATTTTCATCTCTTTTTTTTTCTCTCTTGTTCTAAATTTTTGTGTAGCTTCTTACAGTTCCTTTGTCCTAATCAGCAGTTGAGGCGGCAGTTGAATTCTAAATTCTAT

Coding sequence (CDS)

ATGGGGTGGCTCCAATCCCTATTCTCCCCATTAAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCTAAAAAACGAAGAGGGATATATATTCTGTATGAGGATGTGAAATCCTGTCCCTGTGAAGATGTGCATGTGCTTTGGTCAATATTAGTGGAATCACACACTCCATTGCCACCAAAACAATGA

Protein sequence

MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPKQ

Homology

[Close]

BLAST of MELO.jh012387.1 vs. NCBI nr
Match: KGN56989.1 (hypothetical protein Csa_010650 [Cucumis sativus])

HSP 1 Score: 135 bits (340), Expect = 3.88e-40
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

[Close]

BLAST of MELO.jh012387.1 vs. NCBI nr
Match: KAG6597448.1 (hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123 bits (309), Expect = 2.40e-35
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP 56
          MGWLQSLFSPLKKLWFRLHSSP+KRRGIYILYEDVKSCPCEDVHVLWSILVESHTP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPEKRRGIYILYEDVKSCPCEDVHVLWSILVESHTP 56

[Close]

BLAST of MELO.jh012387.1 vs. NCBI nr
Match: PHT38775.1 (hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical protein T459_08075 [Capsicum annuum])

HSP 1 Score: 121 bits (304), Expect = 1.25e-34
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

[Close]

BLAST of MELO.jh012387.1 vs. NCBI nr
Match: KAG5587814.1 (hypothetical protein H5410_048248 [Solanum commersonii] >TMW85068.1 hypothetical protein EJD97_023849 [Solanum chilense])

HSP 1 Score: 118 bits (296), Expect = 2.08e-33
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

[Close]

BLAST of MELO.jh012387.1 vs. NCBI nr
Match: POO02187.1 (hypothetical protein TorRG33x02_019710 [Trema orientale])

HSP 1 Score: 118 bits (295), Expect = 2.81e-33
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCP EDVHVLWSILVESHT LP K
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPYEDVHVLWSILVESHT-LPTK 59

[Close]

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL
Match: A0A0A0L7K5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 1.88e-40
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60
          MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHTPLPPK 60

[Close]

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL
Match: A0A2G2W0L8 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 6.05e-35
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

[Close]

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL
Match: A0A2G2ZVG2 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 6.05e-35
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH  PLPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHPLPP 60

[Close]

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL
Match: A0A0V0GKY9 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.01e-33
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

[Close]

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL
Match: M1CYA3 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.01e-33
Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 1  MGWLQSLFSPLKKLWFRLHSSPKKRRGIYILYEDVKSCPCEDVHVLWSILVESHT-PLPP 60
          MGWLQSLFSPLKKLWFRLHS+PKKRRGIYILYEDVKSCPCEDV VLWSILVESH   LPP
Sbjct: 1  MGWLQSLFSPLKKLWFRLHSAPKKRRGIYILYEDVKSCPCEDVQVLWSILVESHPHSLPP 60

The following BLAST results are available for this feature:

BLAST of MELO.jh012387.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56989.1	3.88e-40	100.00	hypothetical protein Csa_010650 [Cucumis sativus]	[more]
KAG6597448.1	2.40e-35	98.21	hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sorori...	[more]
PHT38775.1	1.25e-34	90.32	hypothetical protein CQW23_22348 [Capsicum baccatum] >PHT85969.1 hypothetical pr...	[more]
KAG5587814.1	2.08e-33	88.71	hypothetical protein H5410_048248 [Solanum commersonii] >TMW85068.1 hypothetical...	[more]
POO02187.1	2.81e-33	93.33	hypothetical protein TorRG33x02_019710 [Trema orientale]	[more]

BLAST of MELO.jh012387.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7K5	1.88e-40	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G147230 PE=4 SV=1	[more]
A0A2G2W0L8	6.05e-35	90.32	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_22348 PE=4 SV=1	[more]
A0A2G2ZVG2	6.05e-35	90.32	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_08075 PE=4 SV=1	[more]
A0A0V0GKY9	1.01e-33	88.71	Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1	[more]
M1CYA3	1.01e-33	88.71	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]

BLAST of MELO.jh012387.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181:SF7	OS07G0572400 PROTEIN	coord: 1..59
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh012387.1.t1	MELO.jh012387.1.t1	mRNA