MELO.jh011172.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh011172.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionSHSP domain-containing protein
Locationchr05: 25071285 .. 25071791 (+)
RNA-Seq ExpressionMELO.jh011172.1
SyntenyMELO.jh011172.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAGGTTAGAGGTTTGGATAATCAGAGTGTGTCTTGAGAAAATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATCAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCGGAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCCCTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGATTTTTCTTATCCTAAGTGTGTTTTGTTGCTTTGACTATAGCTCACATGTGTTTCGTTAATGGATGGATATTATTATTGTTCATATATAACTTTTATGGTTTTTATATGTAATGTATAATATGGATTGTTGTA

mRNA sequence

AAGAGGTTAGAGGTTTGGATAATCAGAGTGTGTCTTGAGAAAATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATCAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCGGAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCCCTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGATTTTTCTTATCCTAAGTGTGTTTTGTTGCTTTGACTATAGCTCACATGTGTTTCGTTAATGGATGGATATTATTATTGTTCATATATAACTTTTATGGTTTTTATATGTAATGTATAATATGGATTGTTGTA

Coding sequence (CDS)

ATGGGTCTCTTGGAGATTGCTGGCATTGGAGGGCGTCGGTGGGAATGTCACTATCAGAAGCTAAACAGTAGTGGAGGTAGTAATAACAGAGTAGTGGTTATAATAATGCGGAGACGTCGATGGATTAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTGATGTCGTTGTCGAGAAGAATAAGAGAGATTGTGAATAGAATGAAGTTTGTTGAAGATGTATGCCCTAACATCATCTTCTCTACTCAATGGGGACTTCCTGTTCTATCTTATATATGA

Protein sequence

MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI
Homology
BLAST of MELO.jh011172.1 vs. NCBI nr
Match: KAA0056096.1 (hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ96421.1 hypothetical protein E5676_scaffold546G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 221 bits (562), Expect = 1.73e-72
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MGLLEIAGIGGRRWECHY+KLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110
           LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

BLAST of MELO.jh011172.1 vs. NCBI nr
Match: KGN61039.1 (hypothetical protein Csa_021124 [Cucumis sativus])

HSP 1 Score: 193 bits (490), Expect = 1.46e-61
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           M LLEIAGIGGRRWECHY+KLNS GGSN    V++MRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLNS-GGSNR---VVVMRRRRWVKKMLKRGMKGFRLYRFTR 60

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110
           L+SSFGLKVSFLMSLSRRIREIV+RMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

BLAST of MELO.jh011172.1 vs. NCBI nr
Match: KAG6599155.1 (Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 130 bits (326), Expect = 1.18e-32
Identity = 73/109 (66.97%), Postives = 81/109 (74.31%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MGLLE AGIGGRRW   Y+KL+           ++  RRRW+KK LKRG KGFRLYR TR
Sbjct: 452 MGLLETAGIGGRRWN-QYEKLHCEDND------VVKCRRRWMKKTLKRGKKGFRLYRLTR 511

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 109
            RS F LKVSFL+ +SRRIREIVNRMK VEDVC N+IF TQWGLP LSY
Sbjct: 512 SRS-FCLKVSFLVLMSRRIREIVNRMK-VEDVCANVIFFTQWGLPTLSY 551

BLAST of MELO.jh011172.1 vs. NCBI nr
Match: KAF5946811.1 (hypothetical protein HYC85_017039 [Camellia sinensis])

HSP 1 Score: 68.9 bits (167), Expect = 2.23e-12
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MG  ++  +GGR W   Y++L S    N+R  V +  RRRW+ +M  + +KGFRL +  R
Sbjct: 1   MGFEDV--VGGR-WTTRYKRLTS----NDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKR 60

Query: 61  LRSSFGLKVSFLMSLSRRIR----EIVNRMKFVEDVCPNIIFSTQWGLPVLSY 109
           L      K   ++ L RR+     E+VNRMK  +++CP IIFS QWGLPVLS+
Sbjct: 61  L----NWKAFSIVMLPRRMAQIYAEVVNRMK-TDEICPAIIFSGQWGLPVLSH 100

BLAST of MELO.jh011172.1 vs. NCBI nr
Match: KAB2621733.1 (hypothetical protein D8674_023915 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 68.2 bits (165), Expect = 5.66e-12
Identity = 50/109 (45.87%), Postives = 62/109 (56.88%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MG  +I  +GGR   C+YQKL  S     R       R++W+KKM  R +KGFRL R  +
Sbjct: 1   MGFQDI--VGGRL-GCNYQKLTKSNEKLGRPG-----RQQWVKKMNGR-LKGFRLSRSRK 60

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 109
           L       V +   LSR   + VNRMK V+   P IIFSTQWGLPVLS+
Sbjct: 61  LTLKIFSVVVWTSRLSRICSDTVNRMK-VDGAYPTIIFSTQWGLPVLSH 99

BLAST of MELO.jh011172.1 vs. ExPASy TrEMBL
Match: A0A5D3BCS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00490 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 8.36e-73
Identity = 109/110 (99.09%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MGLLEIAGIGGRRWECHY+KLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110
           LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

BLAST of MELO.jh011172.1 vs. ExPASy TrEMBL
Match: A0A0A0LJ29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1)

HSP 1 Score: 193 bits (490), Expect = 7.09e-62
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           M LLEIAGIGGRRWECHY+KLNS GGSN    V++MRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLNS-GGSNR---VVVMRRRRWVKKMLKRGMKGFRLYRFTR 60

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110
           L+SSFGLKVSFLMSLSRRIREIV+RMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LKSSFGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

BLAST of MELO.jh011172.1 vs. ExPASy TrEMBL
Match: A0A7J7H3I9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.08e-12
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MG  ++  +GGR W   Y++L S    N+R  V +  RRRW+ +M  + +KGFRL +  R
Sbjct: 1   MGFEDV--VGGR-WTTRYKRLTS----NDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKR 60

Query: 61  LRSSFGLKVSFLMSLSRRIR----EIVNRMKFVEDVCPNIIFSTQWGLPVLSY 109
           L      K   ++ L RR+     E+VNRMK  +++CP IIFS QWGLPVLS+
Sbjct: 61  L----NWKAFSIVMLPRRMAQIYAEVVNRMK-TDEICPAIIFSGQWGLPVLSH 100

BLAST of MELO.jh011172.1 vs. ExPASy TrEMBL
Match: A0A5N5H511 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_023915 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.74e-12
Identity = 50/109 (45.87%), Postives = 62/109 (56.88%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60
           MG  +I  +GGR   C+YQKL  S     R       R++W+KKM  R +KGFRL R  +
Sbjct: 1   MGFQDI--VGGRL-GCNYQKLTKSNEKLGRPG-----RQQWVKKMNGR-LKGFRLSRSRK 60

Query: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 109
           L       V +   LSR   + VNRMK V+   P IIFSTQWGLPVLS+
Sbjct: 61  LTLKIFSVVVWTSRLSRICSDTVNRMK-VDGAYPTIIFSTQWGLPVLSH 99

BLAST of MELO.jh011172.1 vs. ExPASy TrEMBL
Match: A0A061F3B0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.79e-12
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0

Query: 9   IGGRRWECHYQKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTRLRSSFGLK 68
           +GG    C Y+KL + G +  R        RRW+KKM   G+KG RL R  +L++     
Sbjct: 10  LGGHPVPCRYEKLRNVGDARPR--------RRWVKKM-SGGLKGLRLSRSRKLKTL--CS 69

Query: 69  VSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSY 109
           V F   ++R   +I +R+K    +CPNIIF+T WGLP LS+
Sbjct: 70  VVFANRITRIYADIAHRLKMDGTLCPNIIFATHWGLPTLSH 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0056096.11.73e-7299.09hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ9642... [more]
KGN61039.11.46e-6188.18hypothetical protein Csa_021124 [Cucumis sativus][more]
KAG6599155.11.18e-3266.97Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia][more]
KAF5946811.12.23e-1242.48hypothetical protein HYC85_017039 [Camellia sinensis][more]
KAB2621733.15.66e-1245.87hypothetical protein D8674_023915 [Pyrus ussuriensis x Pyrus communis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCS38.36e-7399.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LJ297.09e-6288.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1[more]
A0A7J7H3I91.08e-1242.48Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1[more]
A0A5N5H5112.74e-1245.87Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A061F3B06.79e-1239.60Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35123OS07G0633900 PROTEIN-RELATEDcoord: 10..109
NoneNo IPR availablePANTHERPTHR35123:SF3OS07G0633900 PROTEINcoord: 10..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh011172.1.t1MELO.jh011172.1.t1mRNA