MELO.jh007100.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh007100.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 1174287 .. 1174705 (+)
RNA-Seq ExpressionMELO.jh007100.1
SyntenyMELO.jh007100.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAACTATTACTCTCAATGGCTAAATTCTCTTTCATTTTCATCTTCATTTTGGCCTTCATTTCAGTTATTGTAGCTGCTGCCATTGGAGATATGAGCAAAGAAAAAGATGTTGCAACGAAGCTTCGTTATCATGATGAGTTCATATGGGGAAGAAAGGAGAGAATTAACCATGGAAGCTTTAGAGGTCCAAATAAATACCTTCTCAATAATCCTCACCCATTTCACCCATTTGATCAATTTCAAGACCCAATTCTCTAATTTTTTTTTTAAAAAAAACTTTTCTTATGCTCTTTTAAGTGATTTTCTTTTTGTTTATATTTGATTTGGTGTACTATAAGGTTGGATTTTGGTTCTTGGATTGATGTATGATAACTTTGTAATGGGATTGTCTTGAATTATAAAAAAAGTGTATTATAT

mRNA sequence

AAAAACTATTACTCTCAATGGCTAAATTCTCTTTCATTTTCATCTTCATTTTGGCCTTCATTTCAGTTATTGTAGCTGCTGCCATTGGAGATATGAGCAAAGAAAAAGATGTTGCAACGAAGCTTCGTTATCATGATGAGTTCATATGGGGAAGAAAGGAGAGAATTAACCATGGAAGCTTTAGAGGTCCAAATAAATACCTTCTCAATAATCCTCACCCATTTCACCCATTTGATCAATTTCAAGACCCAATTCTCTAATTTTTTTTTTAAAAAAAACTTTTCTTATGCTCTTTTAAGTGATTTTCTTTTTGTTTATATTTGATTTGGTGTACTATAAGGTTGGATTTTGGTTCTTGGATTGATGTATGATAACTTTGTAATGGGATTGTCTTGAATTATAAAAAAAGTGTATTATAT

Coding sequence (CDS)

ATGGCTAAATTCTCTTTCATTTTCATCTTCATTTTGGCCTTCATTTCAGTTATTGTAGCTGCTGCCATTGGAGATATGAGCAAAGAAAAAGATGTTGCAACGAAGCTTCGTTATCATGATGAGTTCATATGGGGAAGAAAGGAGAGAATTAACCATGGAAGCTTTAGAGGTCCAAATAAATACCTTCTCAATAATCCTCACCCATTTCACCCATTTGATCAATTTCAAGACCCAATTCTCTAA

Protein sequence

MAKFSFIFIFILAFISVIVAAAIGDMSKEKDVATKLRYHDEFIWGRKERINHGSFRGPNKYLLNNPHPFHPFDQFQDPIL
Homology
[Close]
BLAST of MELO.jh007100.1 vs. NCBI nr
Match: KGN60344.1 (hypothetical protein Csa_002159 [Cucumis sativus])

HSP 1 Score: 147 bits (372), Expect = 1.92e-44
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 1  MAKFSFIFIFILAFISVIVAAAIGDMSKEKDVATKLRYHDEFIWGRKERINHGSFRGPNK 60
          MAKFSFI IFILAFISV VAAAIGDMSK KDVATK  YHDEFIWGRKERINHGSFRGP+K
Sbjct: 1  MAKFSFILIFILAFISVTVAAAIGDMSKGKDVATKFHYHDEFIWGRKERINHGSFRGPDK 60

Query: 61 YLLNNPHPFHPFDQFQDPIL 80
          YLLN+PHPFHPFDQFQ PIL
Sbjct: 61 YLLNDPHPFHPFDQFQGPIL 80

[Close]
BLAST of MELO.jh007100.1 vs. ExPASy TrEMBL
Match: A0A0A0LH37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1)

HSP 1 Score: 147 bits (372), Expect = 9.30e-45
Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0 

Query: 1  MAKFSFIFIFILAFISVIVAAAIGDMSKEKDVATKLRYHDEFIWGRKERINHGSFRGPNK 60
          MAKFSFI IFILAFISV VAAAIGDMSK KDVATK  YHDEFIWGRKERINHGSFRGP+K
Sbjct: 1  MAKFSFILIFILAFISVTVAAAIGDMSKGKDVATKFHYHDEFIWGRKERINHGSFRGPDK 60

Query: 61 YLLNNPHPFHPFDQFQDPIL 80
          YLLN+PHPFHPFDQFQ PIL
Sbjct: 61 YLLNDPHPFHPFDQFQGPIL 80

The following BLAST results are available for this feature:
BLAST of MELO.jh007100.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60344.11.92e-4490.00hypothetical protein Csa_002159 [Cucumis sativus][more]
BLAST of MELO.jh007100.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh007100.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH379.30e-4590.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1[more]
BLAST of MELO.jh007100.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh007100.1.t1MELO.jh007100.1.t1mRNA