Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCACAATTGCATTACCATGTCCACAACTAGTGAAATTATTTGTGAATGTTAGAAATATGATGAATGTCCCATTGGACCTCAAGGTACCTAGCCAATGTCTTGACCATAGTCAATACCTTGACCCCGAATCTGAGTTAGTTGTGCCTCCATTGACTAATTTAGATGAAGATATGGATTTAATTGCTGATAATATGTTTATAGAACTCAGGACATCAACACATGATGAGTTTGATGAATTAGACCTTGAAGGTGAACATGATATCCCTTCTCAAACATTTAATGACATGGTTAATAGTACTGTAGAACACGATTCTATTTTTCAACCAGTAGCTGTTGAAAGTGATATGTTGTACAAGGGGTTCATGTGTAGTGATAAAGAAACTATGCAACATATCGTCAAACGTTTTGTTGTGAAGAGTCACCGCCCTTACGAAGTTGTATAG
mRNA sequence
ATGTTCACAATTGCATTACCATGTCCACAACTAGTGAAATTATTTGTGAATGTTAGAAATATGATGAATGTCCCATTGGACCTCAAGGTACCTAGCCAATGTCTTGACCATAGTCAATACCTTGACCCCGAATCTGAGTTAGTTGTGCCTCCATTGACTAATTTAGATGAAGATATGGATTTAATTGCTGATAATATGTTTATAGAACTCAGGACATCAACACATGATGAGTTTGATGAATTAGACCTTGAAGGTGAACATGATATCCCTTCTCAAACATTTAATGACATGGTTAATAGTACTGTAGAACACGATTCTATTTTTCAACCAGTAGCTGTTGAAAGTGATATGTTGTACAAGGGGTTCATGTGTAGTGATAAAGAAACTATGCAACATATCGTCAAACGTTTTGTTGTGAAGAGTCACCGCCCTTACGAAGTTGTATAG
Coding sequence (CDS)
ATGTTCACAATTGCATTACCATGTCCACAACTAGTGAAATTATTTGTGAATGTTAGAAATATGATGAATGTCCCATTGGACCTCAAGGTACCTAGCCAATGTCTTGACCATAGTCAATACCTTGACCCCGAATCTGAGTTAGTTGTGCCTCCATTGACTAATTTAGATGAAGATATGGATTTAATTGCTGATAATATGTTTATAGAACTCAGGACATCAACACATGATGAGTTTGATGAATTAGACCTTGAAGGTGAACATGATATCCCTTCTCAAACATTTAATGACATGGTTAATAGTACTGTAGAACACGATTCTATTTTTCAACCAGTAGCTGTTGAAAGTGATATGTTGTACAAGGGGTTCATGTGTAGTGATAAAGAAACTATGCAACATATCGTCAAACGTTTTGTTGTGAAGAGTCACCGCCCTTACGAAGTTGTATAG
Protein sequence
MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMDLIADNMFIELRTSTHDEFDELDLEGEHDIPSQTFNDMVNSTVEHDSIFQPVAVESDMLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV
Homology
BLAST of MC10g_new0173 vs. NCBI nr
Match:
XP_022156564.1 (uncharacterized protein LOC111023439 [Momordica charantia])
HSP 1 Score: 234 bits (598), Expect = 1.77e-73
Identity = 115/148 (77.70%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF+IALPCPQL +LFVNVRNMMNV L+L+VPS+CLDHSQ L PE ELVVPP+TNLDEDMD
Sbjct: 37 MFSIALPCPQLAELFVNVRNMMNVSLNLEVPSKCLDHSQCLVPELELVVPPMTNLDEDMD 96
Query: 61 LIADNMFIELRTSTHDEFDELDLEGEHDIPSQTFNDMVNSTVEHDSIFQPVAVESDMLYK 120
L ADN FI+L+T+ DEFDELDLEGEHDI SQTFNDMVN+ EHDSIFQPVA +++MLYK
Sbjct: 97 LTADNRFIDLKTTIDDEFDELDLEGEHDIYSQTFNDMVNNIAEHDSIFQPVAAKNEMLYK 156
Query: 121 GFMCSDKETMQHIVKRFVVKSHRPYEVV 148
GF CSDKETMQHIVK FVV +H YEV+
Sbjct: 157 GFRCSDKETMQHIVKHFVVNNHHTYEVI 184
BLAST of MC10g_new0173 vs. NCBI nr
Match:
XP_022143566.1 (uncharacterized protein LOC111013435 [Momordica charantia])
HSP 1 Score: 216 bits (551), Expect = 1.76e-66
Identity = 111/152 (73.03%), Postives = 125/152 (82.24%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF IAL CPQLV+L VNVRNM+NV LD + PSQCL+HSQ LD E ELVVPP+T+LDEDMD
Sbjct: 64 MFAIALSCPQLVELHVNVRNMINVSLDHEEPSQCLEHSQCLDLEPELVVPPVTHLDEDMD 123
Query: 61 LIADNMFIELRTSTHDEFDELDLEGEHDIPSQTFND----MVNSTVEHDSIFQPVAVESD 120
LIAD+ FIELRT T DEFDELDLEGEHDIPS TFND MVN EHDSI QP+ E+D
Sbjct: 124 LIADDRFIELRTITDDEFDELDLEGEHDIPSPTFNDIANDMVNCNAEHDSIIQPLPAEND 183
Query: 121 MLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV 148
MLYK FMC+DKETMQHIVK F ++SH PY++V
Sbjct: 184 MLYKRFMCNDKETMQHIVKCFALRSHHPYKLV 215
BLAST of MC10g_new0173 vs. NCBI nr
Match:
KAA0034014.1 (uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 117 bits (292), Expect = 1.40e-28
Identity = 65/153 (42.48%), Postives = 100/153 (65.36%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF+IALP P +V L+V V +M++ ++L V + ++ +Y+D E E PP+ + +E
Sbjct: 46 MFSIALPFPNMVHLYVTV-SMVDTAINLNVEPRYVE--EYVDVEPESDAPPVCHEEE--- 105
Query: 61 LIADNMFIELRTSTHDEFDELDLEG-EHDIPSQTFNDM----VNSTVEHDSIFQPVAVES 120
++A N + E RT T DEF+E+D +G E+++PS TF D+ V++ EHD I P+ ++
Sbjct: 106 MVATNEYTEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDN 165
Query: 121 DMLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV 148
LY G +C +KE MQH+VK F +KSH PYEVV
Sbjct: 166 TKLYTGMICENKEMMQHMVKCFAIKSHAPYEVV 192
BLAST of MC10g_new0173 vs. NCBI nr
Match:
KAA0055864.1 (uncharacterized protein E6C27_scaffold104G00420 [Cucumis melo var. makuwa] >TYK24088.1 uncharacterized protein E5676_scaffold943G00600 [Cucumis melo var. makuwa])
HSP 1 Score: 109 bits (273), Expect = 3.55e-27
Identity = 62/153 (40.52%), Postives = 99/153 (64.71%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF+IALP P +V L+V V +M+++ ++L V ++ +DPES+ PP+ + +E
Sbjct: 4 MFSIALPFPNMVHLYVTV-SMVDLAINLNVEPTYVEEYVDVDPESD--APPVCHEEE--- 63
Query: 61 LIADNMFIELRTSTHDEFDELDLEG-EHDIPSQTFNDM----VNSTVEHDSIFQPVAVES 120
++A N + E RT T+DE +E+DL+G E+++PS TF D+ V+ EHD I + +++
Sbjct: 64 MVATNKYTEFRTETNDELEEMDLDGCEYEVPSNTFTDLDMNAVDGIQEHDPIIVLMVIDN 123
Query: 121 DMLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV 148
LY G +C +KE +QH+VK F +KSH YEVV
Sbjct: 124 TKLYTGMICENKEMLQHMVKCFAIKSHASYEVV 150
BLAST of MC10g_new0173 vs. NCBI nr
Match:
KAA0040603.1 (uncharacterized protein E6C27_scaffold262G001800 [Cucumis melo var. makuwa] >TYK05645.1 uncharacterized protein E5676_scaffold98G001070 [Cucumis melo var. makuwa])
HSP 1 Score: 107 bits (268), Expect = 1.53e-26
Identity = 58/146 (39.73%), Postives = 96/146 (65.75%), Query Frame = 0
Query: 9 PQLVKLFVNVRNM-MNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMDLIADNMF 68
P +V L+VNV + +++ L+ + Q + +Q + P+SE+VV +++ +D +++ +N +
Sbjct: 4 PNMVHLYVNVSRVGLDINLNSEPFGQLENRTQVIVPDSEIVV---SSVYDDEEIVTNNEY 63
Query: 69 IELRTSTHDEFDELDLEG-EHDIPSQTFN----DMVNSTVEHDSIFQPVAVESDMLYKGF 128
++ RT T DEF+E D +G EH++PS T D+++S EH+ I V V++ LYKG
Sbjct: 64 MDFRTETDDEFEEFDFDGCEHELPSNTLTQIDMDVIDSICEHNPIVVHVVVDNSELYKGM 123
Query: 129 MCSDKETMQHIVKRFVVKSHRPYEVV 148
+C DKET+QH+VK F +K H PYEVV
Sbjct: 124 ICQDKETLQHMVKYFAIKIHAPYEVV 146
BLAST of MC10g_new0173 vs. ExPASy TrEMBL
Match:
A0A6J1DTV0 (uncharacterized protein LOC111023439 OS=Momordica charantia OX=3673 GN=LOC111023439 PE=4 SV=1)
HSP 1 Score: 234 bits (598), Expect = 8.58e-74
Identity = 115/148 (77.70%), Postives = 130/148 (87.84%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF+IALPCPQL +LFVNVRNMMNV L+L+VPS+CLDHSQ L PE ELVVPP+TNLDEDMD
Sbjct: 37 MFSIALPCPQLAELFVNVRNMMNVSLNLEVPSKCLDHSQCLVPELELVVPPMTNLDEDMD 96
Query: 61 LIADNMFIELRTSTHDEFDELDLEGEHDIPSQTFNDMVNSTVEHDSIFQPVAVESDMLYK 120
L ADN FI+L+T+ DEFDELDLEGEHDI SQTFNDMVN+ EHDSIFQPVA +++MLYK
Sbjct: 97 LTADNRFIDLKTTIDDEFDELDLEGEHDIYSQTFNDMVNNIAEHDSIFQPVAAKNEMLYK 156
Query: 121 GFMCSDKETMQHIVKRFVVKSHRPYEVV 148
GF CSDKETMQHIVK FVV +H YEV+
Sbjct: 157 GFRCSDKETMQHIVKHFVVNNHHTYEVI 184
BLAST of MC10g_new0173 vs. ExPASy TrEMBL
Match:
A0A6J1CQN0 (uncharacterized protein LOC111013435 OS=Momordica charantia OX=3673 GN=LOC111013435 PE=4 SV=1)
HSP 1 Score: 216 bits (551), Expect = 8.51e-67
Identity = 111/152 (73.03%), Postives = 125/152 (82.24%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF IAL CPQLV+L VNVRNM+NV LD + PSQCL+HSQ LD E ELVVPP+T+LDEDMD
Sbjct: 64 MFAIALSCPQLVELHVNVRNMINVSLDHEEPSQCLEHSQCLDLEPELVVPPVTHLDEDMD 123
Query: 61 LIADNMFIELRTSTHDEFDELDLEGEHDIPSQTFND----MVNSTVEHDSIFQPVAVESD 120
LIAD+ FIELRT T DEFDELDLEGEHDIPS TFND MVN EHDSI QP+ E+D
Sbjct: 124 LIADDRFIELRTITDDEFDELDLEGEHDIPSPTFNDIANDMVNCNAEHDSIIQPLPAEND 183
Query: 121 MLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV 148
MLYK FMC+DKETMQHIVK F ++SH PY++V
Sbjct: 184 MLYKRFMCNDKETMQHIVKCFALRSHHPYKLV 215
BLAST of MC10g_new0173 vs. ExPASy TrEMBL
Match:
A0A5A7SS31 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00820 PE=4 SV=1)
HSP 1 Score: 117 bits (292), Expect = 6.79e-29
Identity = 65/153 (42.48%), Postives = 100/153 (65.36%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF+IALP P +V L+V V +M++ ++L V + ++ +Y+D E E PP+ + +E
Sbjct: 46 MFSIALPFPNMVHLYVTV-SMVDTAINLNVEPRYVE--EYVDVEPESDAPPVCHEEE--- 105
Query: 61 LIADNMFIELRTSTHDEFDELDLEG-EHDIPSQTFNDM----VNSTVEHDSIFQPVAVES 120
++A N + E RT T DEF+E+D +G E+++PS TF D+ V++ EHD I P+ ++
Sbjct: 106 MVATNEYTEFRTETDDEFEEMDFDGCEYEVPSNTFTDLDMNAVDAIQEHDPIIVPMVTDN 165
Query: 121 DMLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV 148
LY G +C +KE MQH+VK F +KSH PYEVV
Sbjct: 166 TKLYTGMICENKEMMQHMVKCFAIKSHAPYEVV 192
BLAST of MC10g_new0173 vs. ExPASy TrEMBL
Match:
A0A5D3DKL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00600 PE=4 SV=1)
HSP 1 Score: 109 bits (273), Expect = 1.72e-27
Identity = 62/153 (40.52%), Postives = 99/153 (64.71%), Query Frame = 0
Query: 1 MFTIALPCPQLVKLFVNVRNMMNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMD 60
MF+IALP P +V L+V V +M+++ ++L V ++ +DPES+ PP+ + +E
Sbjct: 4 MFSIALPFPNMVHLYVTV-SMVDLAINLNVEPTYVEEYVDVDPESD--APPVCHEEE--- 63
Query: 61 LIADNMFIELRTSTHDEFDELDLEG-EHDIPSQTFNDM----VNSTVEHDSIFQPVAVES 120
++A N + E RT T+DE +E+DL+G E+++PS TF D+ V+ EHD I + +++
Sbjct: 64 MVATNKYTEFRTETNDELEEMDLDGCEYEVPSNTFTDLDMNAVDGIQEHDPIIVLMVIDN 123
Query: 121 DMLYKGFMCSDKETMQHIVKRFVVKSHRPYEVV 148
LY G +C +KE +QH+VK F +KSH YEVV
Sbjct: 124 TKLYTGMICENKEMLQHMVKCFAIKSHASYEVV 150
BLAST of MC10g_new0173 vs. ExPASy TrEMBL
Match:
A0A5D3C2N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001070 PE=4 SV=1)
HSP 1 Score: 107 bits (268), Expect = 7.41e-27
Identity = 58/146 (39.73%), Postives = 96/146 (65.75%), Query Frame = 0
Query: 9 PQLVKLFVNVRNM-MNVPLDLKVPSQCLDHSQYLDPESELVVPPLTNLDEDMDLIADNMF 68
P +V L+VNV + +++ L+ + Q + +Q + P+SE+VV +++ +D +++ +N +
Sbjct: 4 PNMVHLYVNVSRVGLDINLNSEPFGQLENRTQVIVPDSEIVV---SSVYDDEEIVTNNEY 63
Query: 69 IELRTSTHDEFDELDLEG-EHDIPSQTFN----DMVNSTVEHDSIFQPVAVESDMLYKGF 128
++ RT T DEF+E D +G EH++PS T D+++S EH+ I V V++ LYKG
Sbjct: 64 MDFRTETDDEFEEFDFDGCEHELPSNTLTQIDMDVIDSICEHNPIVVHVVVDNSELYKGM 123
Query: 129 MCSDKETMQHIVKRFVVKSHRPYEVV 148
+C DKET+QH+VK F +K H PYEVV
Sbjct: 124 ICQDKETLQHMVKYFAIKIHAPYEVV 146
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022156564.1 | 1.77e-73 | 77.70 | uncharacterized protein LOC111023439 [Momordica charantia] | [more] |
XP_022143566.1 | 1.76e-66 | 73.03 | uncharacterized protein LOC111013435 [Momordica charantia] | [more] |
KAA0034014.1 | 1.40e-28 | 42.48 | uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa] | [more] |
KAA0055864.1 | 3.55e-27 | 40.52 | uncharacterized protein E6C27_scaffold104G00420 [Cucumis melo var. makuwa] >TYK2... | [more] |
KAA0040603.1 | 1.53e-26 | 39.73 | uncharacterized protein E6C27_scaffold262G001800 [Cucumis melo var. makuwa] >TYK... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DTV0 | 8.58e-74 | 77.70 | uncharacterized protein LOC111023439 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1CQN0 | 8.51e-67 | 73.03 | uncharacterized protein LOC111013435 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A5A7SS31 | 6.79e-29 | 42.48 | DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5D3DKL9 | 1.72e-27 | 40.52 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3C2N3 | 7.41e-27 | 39.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |