MC10g1377 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1377
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionELL-associated factor 1-like
LocationMC10: 17243989 .. 17244402 (+)
RNA-Seq ExpressionMC10g1377
SyntenyMC10g1377
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAGAAGAAATGGGGAGCGCTGTTCCGCCTGAAGAAGGTATTGAGGAAATTCACGGTGTTGCTCCGCCTCCACCTCGCTCGCCGCCTACCTTCCCACCGGCTCCGGTCATCCGCTTTTGGCGATCGGACGGTGAGGCCTAGGCCAGTGCCGCCGCCGCAGCCACTACCGCCACCGCCGCCGCCGCCGCCGCCGCCGAGCTACGGAATTATTGAATACGATGTCGATGATTCGCGGCCGCCGATGACGCAGAGCTACGAAATTGTTGAAGACGATGTGGATGAGCGAGCTCAGAAATTCATCGATGATTTCCGTAGTCGATTGTGGTTAGAAAGACAGATTTCTCGGCAATTGAGGTACTACTACAGAAGTAGCAGCTCTGAAACGGAGTATGAAGACGGATCTCCGCCG

mRNA sequence

ATGGGAGAGAAGAAATGGGGAGCGCTGTTCCGCCTGAAGAAGGTATTGAGGAAATTCACGGTGTTGCTCCGCCTCCACCTCGCTCGCCGCCTACCTTCCCACCGGCTCCGGTCATCCGCTTTTGGCGATCGGACGGTGAGGCCTAGGCCAGTGCCGCCGCCGCAGCCACTACCGCCACCGCCGCCGCCGCCGCCGCCGCCGAGCTACGGAATTATTGAATACGATGTCGATGATTCGCGGCCGCCGATGACGCAGAGCTACGAAATTGTTGAAGACGATGTGGATGAGCGAGCTCAGAAATTCATCGATGATTTCCGTAGTCGATTGTGGTTAGAAAGACAGATTTCTCGGCAATTGAGGTACTACTACAGAAGTAGCAGCTCTGAAACGGAGTATGAAGACGGATCTCCGCCG

Coding sequence (CDS)

ATGGGAGAGAAGAAATGGGGAGCGCTGTTCCGCCTGAAGAAGGTATTGAGGAAATTCACGGTGTTGCTCCGCCTCCACCTCGCTCGCCGCCTACCTTCCCACCGGCTCCGGTCATCCGCTTTTGGCGATCGGACGGTGAGGCCTAGGCCAGTGCCGCCGCCGCAGCCACTACCGCCACCGCCGCCGCCGCCGCCGCCGCCGAGCTACGGAATTATTGAATACGATGTCGATGATTCGCGGCCGCCGATGACGCAGAGCTACGAAATTGTTGAAGACGATGTGGATGAGCGAGCTCAGAAATTCATCGATGATTTCCGTAGTCGATTGTGGTTAGAAAGACAGATTTCTCGGCAATTGAGGTACTACTACAGAAGTAGCAGCTCTGAAACGGAGTATGAAGACGGATCTCCGCCG

Protein sequence

MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPPPPPPPPPSYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQLRYYYRSSSSETEYEDGSPP
Homology
BLAST of MC10g1377 vs. NCBI nr
Match: XP_022145291.1 (ELL-associated factor 1-like [Momordica charantia])

HSP 1 Score: 261 bits (668), Expect = 1.23e-87
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60
           MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP
Sbjct: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60

Query: 61  PPPPPPP-SYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQL 120
           PPPPPPP SYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQL
Sbjct: 61  PPPPPPPPSYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQL 120

Query: 121 RYYYRSSSSETEYEDGSPP 138
           RYYYRSSSSETEYEDGSPP
Sbjct: 121 RYYYRSSSSETEYEDGSPP 139

BLAST of MC10g1377 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia])

HSP 1 Score: 79.7 bits (195), Expect = 6.31e-16
Identity = 66/152 (43.42%), Postives = 79/152 (51.97%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHL----ARRLPSHRLRSSAFGDRTVRPRPVPPPQP 60
           M EKK   + RLKK +RK T LLRL+L    ARR PS RLRS +F DRTV          
Sbjct: 1   MAEKKSPLMPRLKKAVRKITALLRLNLSLCLARRRPSGRLRSFSFSDRTV---------- 60

Query: 61  LPPPPPPPPPPSYGIIEYDVDDS----------RPPMTQSYEIVEDDVDERAQKFIDDFR 120
                        G+  +  D+               +  Y   EDDVD+R+Q FID+F 
Sbjct: 61  -------------GLRSFLEDEEIGENCSMRRLERASSLRYGNAEDDVDKRSQIFIDNFL 120

Query: 121 SRLWLERQISRQLRYYYRSSSSETEYEDGSPP 138
            RL LERQIS QLRYY R +SS TE E+ SPP
Sbjct: 121 RRLRLERQISLQLRYY-RINSSGTEDEERSPP 128

BLAST of MC10g1377 vs. NCBI nr
Match: KAG6596691.1 (hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028225.1 hypothetical protein SDJN02_09405, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 71.6 bits (174), Expect = 7.37e-13
Identity = 63/143 (44.06%), Postives = 74/143 (51.75%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60
           M +KK   LFRLKK   K T  LRL +ARR  S RLRS    DRT   R           
Sbjct: 1   MAQKKSPLLFRLKKSAIKLTAFLRLCVARRQNSRRLRSFGSDDRTAGLR----------- 60

Query: 61  PPPPPPPSYGIIEYDVDDS-----RPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQI 120
                  S+   E  V++          + SY   EDDVD+R+Q FID F  +L LERQI
Sbjct: 61  -------SFLEDERIVENRSVRKLERASSASYVNFEDDVDKRSQIFIDKFLRQLRLERQI 120

Query: 121 SRQLRYYYRSSSSETEYEDGSPP 138
           S QLRY  R +SSETE E+ SPP
Sbjct: 121 SLQLRYC-RVNSSETESEEKSPP 124

BLAST of MC10g1377 vs. NCBI nr
Match: KAA0052985.1 (hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK11441.1 hypothetical protein E5676_scaffold139G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 64.3 bits (155), Expect = 4.87e-10
Identity = 60/149 (40.27%), Postives = 70/149 (46.98%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60
           M EKK     RLKK L K T ++RL L  R  S RL S    DR V              
Sbjct: 1   MAEKKSPMASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKV-------------- 60

Query: 61  PPPPPPPSYGIIEYDVDDSR-----------PPMTQSYEIVEDDVDERAQKFIDDFRSRL 120
                    GI     D SR              +  Y   E+DVD+RA+ FI++FR +L
Sbjct: 61  ---------GIRIVLEDQSRIAENSFARKLERASSSRYGGYEEDVDQRAEIFIENFRRQL 120

Query: 121 WLERQISRQLRYYYRSSSSETEYEDGSPP 138
            LERQIS QLRYY R +S ETEYE  SPP
Sbjct: 121 RLERQISLQLRYY-RVNSYETEYEQISPP 125

BLAST of MC10g1377 vs. NCBI nr
Match: KAG8491128.1 (hypothetical protein CXB51_014290 [Gossypium anomalum])

HSP 1 Score: 58.9 bits (141), Expect = 5.40e-08
Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLA--------RRLPSHRLRSSAFGDRTVRPRPVP 60
           MG + W  + RLK+ +++   LLR +L         R L + RL + +F DR        
Sbjct: 1   MGRENWSVMGRLKRAVKQINSLLRFNLTKWRSSCFLRSLSTRRLPTLSFNDRLRL----- 60

Query: 61  PPQPLPPPPPPPPPPSYGII-----EYDVDDSRPPM-----TQSYEIVEDDVDERAQKFI 120
                           +G I     E +  + + P+     T SY   +DDVD+RA+ FI
Sbjct: 61  ----------------HGCIMDEEEEEEESNKKGPVRALHRTTSYASADDDVDQRAELFI 118

BLAST of MC10g1377 vs. ExPASy TrEMBL
Match: A0A6J1CVX6 (ELL-associated factor 1-like OS=Momordica charantia OX=3673 GN=LOC111014779 PE=4 SV=1)

HSP 1 Score: 261 bits (668), Expect = 5.94e-88
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60
           MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP
Sbjct: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60

Query: 61  PPPPPPP-SYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQL 120
           PPPPPPP SYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQL
Sbjct: 61  PPPPPPPPSYGIIEYDVDDSRPPMTQSYEIVEDDVDERAQKFIDDFRSRLWLERQISRQL 120

Query: 121 RYYYRSSSSETEYEDGSPP 138
           RYYYRSSSSETEYEDGSPP
Sbjct: 121 RYYYRSSSSETEYEDGSPP 139

BLAST of MC10g1377 vs. ExPASy TrEMBL
Match: A0A6J1CW64 (uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014780 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.06e-16
Identity = 66/152 (43.42%), Postives = 79/152 (51.97%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHL----ARRLPSHRLRSSAFGDRTVRPRPVPPPQP 60
           M EKK   + RLKK +RK T LLRL+L    ARR PS RLRS +F DRTV          
Sbjct: 1   MAEKKSPLMPRLKKAVRKITALLRLNLSLCLARRRPSGRLRSFSFSDRTV---------- 60

Query: 61  LPPPPPPPPPPSYGIIEYDVDDS----------RPPMTQSYEIVEDDVDERAQKFIDDFR 120
                        G+  +  D+               +  Y   EDDVD+R+Q FID+F 
Sbjct: 61  -------------GLRSFLEDEEIGENCSMRRLERASSLRYGNAEDDVDKRSQIFIDNFL 120

Query: 121 SRLWLERQISRQLRYYYRSSSSETEYEDGSPP 138
            RL LERQIS QLRYY R +SS TE E+ SPP
Sbjct: 121 RRLRLERQISLQLRYY-RINSSGTEDEERSPP 128

BLAST of MC10g1377 vs. ExPASy TrEMBL
Match: A0A5D3CHZ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00970 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.36e-10
Identity = 60/149 (40.27%), Postives = 70/149 (46.98%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLARRLPSHRLRSSAFGDRTVRPRPVPPPQPLPPP 60
           M EKK     RLKK L K T ++RL L  R  S RL S    DR V              
Sbjct: 1   MAEKKSPMASRLKKALIKLTAVVRLCLVPRRRSQRLGSFDSDDRKV-------------- 60

Query: 61  PPPPPPPSYGIIEYDVDDSR-----------PPMTQSYEIVEDDVDERAQKFIDDFRSRL 120
                    GI     D SR              +  Y   E+DVD+RA+ FI++FR +L
Sbjct: 61  ---------GIRIVLEDQSRIAENSFARKLERASSSRYGGYEEDVDQRAEIFIENFRRQL 120

Query: 121 WLERQISRQLRYYYRSSSSETEYEDGSPP 138
            LERQIS QLRYY R +S ETEYE  SPP
Sbjct: 121 RLERQISLQLRYY-RVNSYETEYEQISPP 125

BLAST of MC10g1377 vs. ExPASy TrEMBL
Match: A0A1U8ITS3 (uncharacterized protein LOC107900356 OS=Gossypium hirsutum OX=3635 GN=LOC107900356 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.77e-08
Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLA--------RRLPSHRLRSSAFGDRTVRPRPVP 60
           MG + W  + RLK+ +++   LLR +L         R L + R  + +F DR        
Sbjct: 1   MGRENWSVMGRLKRAVKQINSLLRFNLTKWRFSCFLRSLSTRRRPTLSFNDRLGL----- 60

Query: 61  PPQPLPPPPPPPPPPSYGII---EYDVDDSRPPM-----TQSYEIVEDDVDERAQKFIDD 120
                           +G I   E +  + + P+     T SY   +DDVD+RA+ FI +
Sbjct: 61  ----------------HGCIVDEEEEESNKKGPVRALHRTTSYASADDDVDQRAELFISN 116

BLAST of MC10g1377 vs. ExPASy TrEMBL
Match: A0A5D2UIM6 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D06G126500v1 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.77e-08
Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 0

Query: 1   MGEKKWGALFRLKKVLRKFTVLLRLHLA--------RRLPSHRLRSSAFGDRTVRPRPVP 60
           MG + W  + RLK+ +++   LLR +L         R L + R  + +F DR        
Sbjct: 1   MGRENWSVMGRLKRAVKQINSLLRFNLTKWRFSCFLRSLSTRRRPTLSFNDRLGL----- 60

Query: 61  PPQPLPPPPPPPPPPSYGII---EYDVDDSRPPM-----TQSYEIVEDDVDERAQKFIDD 120
                           +G I   E +  + + P+     T SY   +DDVD+RA+ FI +
Sbjct: 61  ----------------HGCIVDEEEEESNKKGPVRALHRTTSYASADDDVDQRAELFISN 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022145291.11.23e-8799.28ELL-associated factor 1-like [Momordica charantia][more]
XP_022145292.16.31e-1643.42uncharacterized protein LOC111014780 [Momordica charantia][more]
KAG6596691.17.37e-1344.06hypothetical protein SDJN03_09871, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0052985.14.87e-1040.27hypothetical protein E6C27_scaffold344G00960 [Cucumis melo var. makuwa] >TYK1144... [more]
KAG8491128.15.40e-0832.37hypothetical protein CXB51_014290 [Gossypium anomalum][more]
Match NameE-valueIdentityDescription
A0A6J1CVX65.94e-8899.28ELL-associated factor 1-like OS=Momordica charantia OX=3673 GN=LOC111014779 PE=4... [more]
A0A6J1CW643.06e-1643.42uncharacterized protein LOC111014780 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A5D3CHZ52.36e-1040.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1U8ITS39.77e-0832.12uncharacterized protein LOC107900356 OS=Gossypium hirsutum OX=3635 GN=LOC1079003... [more]
A0A5D2UIM69.77e-0832.12Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D06G126500v1 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 91..121
e-value: 4.6E-5
score: 22.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1377.1MC10g1377.1mRNA