MC10g1181 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g1181
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNAC domain-containing protein 12-like
LocationMC10: 14924960 .. 14925094 (+)
RNA-Seq ExpressionMC10g1181
SyntenyMC10g1181
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTACTATGAAAGATTTTCATTATGAGAAGGGTCAAGATTGTGGTCAATTTTCGTGGATTATGTATGAGTACTCTCTTGATCCTTCCAATCTACTATTAGATACAAAAAACGATATAAAAGATTCTTATGTTCTT

mRNA sequence

GGTACTATGAAAGATTTTCATTATGAGAAGGGTCAAGATTGTGGTCAATTTTCGTGGATTATGTATGAGTACTCTCTTGATCCTTCCAATCTACTATTAGATACAAAAAACGATATAAAAGATTCTTATGTTCTT

Coding sequence (CDS)

GGTACTATGAAAGATTTTCATTATGAGAAGGGTCAAGATTGTGGTCAATTTTCGTGGATTATGTATGAGTACTCTCTTGATCCTTCCAATCTACTATTAGATACAAAAAACGATATAAAAGATTCTTATGTTCTT

Protein sequence

GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL
Homology
[Close]
BLAST of MC10g1181 vs. NCBI nr
Match: XP_022145773.1 (NAC domain-containing protein 12-like [Momordica charantia])

HSP 1 Score: 76.3 bits (186), Expect = 9.05e-15
Identity = 36/45 (80.00%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1   GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
           GTMK FHYE GQDCG FSWIMYEYSLDPS L   T  DIKDSYVL
Sbjct: 105 GTMKRFHYENGQDCGPFSWIMYEYSLDPSILPSTTTIDIKDSYVL 149

[Close]
BLAST of MC10g1181 vs. NCBI nr
Match: XP_022159029.1 (NAC transcription factor 29-like [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 4.61e-14
Identity = 35/45 (77.78%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1   GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
           GTMK FHYE GQDC QFSWIMYEYSLDPS L      DIKDSYVL
Sbjct: 108 GTMKRFHYENGQDCSQFSWIMYEYSLDPSILPSTNTIDIKDSYVL 152

[Close]
BLAST of MC10g1181 vs. ExPASy TrEMBL
Match: A0A6J1CWV5 (NAC domain-containing protein 12-like OS=Momordica charantia OX=3673 GN=LOC111015148 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.38e-15
Identity = 36/45 (80.00%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1   GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
           GTMK FHYE GQDCG FSWIMYEYSLDPS L   T  DIKDSYVL
Sbjct: 105 GTMKRFHYENGQDCGPFSWIMYEYSLDPSILPSTTTIDIKDSYVL 149

[Close]
BLAST of MC10g1181 vs. ExPASy TrEMBL
Match: A0A6J1E162 (NAC transcription factor 29-like OS=Momordica charantia OX=3673 GN=LOC111025473 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.23e-14
Identity = 35/45 (77.78%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 1   GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
           GTMK FHYE GQDC QFSWIMYEYSLDPS L      DIKDSYVL
Sbjct: 108 GTMKRFHYENGQDCSQFSWIMYEYSLDPSILPSTNTIDIKDSYVL 152

The following BLAST results are available for this feature:
BLAST of MC10g1181 vs.
Match NameE-valueIdentityDescription
BLAST of MC10g1181 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145773.19.05e-1580.00NAC domain-containing protein 12-like [Momordica charantia][more]
XP_022159029.14.61e-1477.78NAC transcription factor 29-like [Momordica charantia][more]
BLAST of MC10g1181 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CWV54.38e-1580.00NAC domain-containing protein 12-like OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1E1622.23e-1477.78NAC transcription factor 29-like OS=Momordica charantia OX=3673 GN=LOC111025473 ... [more]
BLAST of MC10g1181 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g1181.1MC10g1181.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding