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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GGTACTATGAAAGATTTTCATTATGAGAAGGGTCAAGATTGTGGTCAATTTTCGTGGATTATGTATGAGTACTCTCTTGATCCTTCCAATCTACTATTAGATACAAAAAACGATATAAAAGATTCTTATGTTCTT mRNA sequence GGTACTATGAAAGATTTTCATTATGAGAAGGGTCAAGATTGTGGTCAATTTTCGTGGATTATGTATGAGTACTCTCTTGATCCTTCCAATCTACTATTAGATACAAAAAACGATATAAAAGATTCTTATGTTCTT Coding sequence (CDS) GGTACTATGAAAGATTTTCATTATGAGAAGGGTCAAGATTGTGGTCAATTTTCGTGGATTATGTATGAGTACTCTCTTGATCCTTCCAATCTACTATTAGATACAAAAAACGATATAAAAGATTCTTATGTTCTT Protein sequence GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL
Homology
BLAST of MC10g1181 vs. NCBI nr
Match: XP_022145773.1 (NAC domain-containing protein 12-like [Momordica charantia]) HSP 1 Score: 76.3 bits (186), Expect = 9.05e-15 Identity = 36/45 (80.00%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 1 GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
GTMK FHYE GQDCG FSWIMYEYSLDPS L T DIKDSYVL
Sbjct: 105 GTMKRFHYENGQDCGPFSWIMYEYSLDPSILPSTTTIDIKDSYVL 149
BLAST of MC10g1181 vs. NCBI nr
Match: XP_022159029.1 (NAC transcription factor 29-like [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 4.61e-14 Identity = 35/45 (77.78%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 1 GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
GTMK FHYE GQDC QFSWIMYEYSLDPS L DIKDSYVL
Sbjct: 108 GTMKRFHYENGQDCSQFSWIMYEYSLDPSILPSTNTIDIKDSYVL 152
BLAST of MC10g1181 vs. ExPASy TrEMBL
Match: A0A6J1CWV5 (NAC domain-containing protein 12-like OS=Momordica charantia OX=3673 GN=LOC111015148 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.38e-15 Identity = 36/45 (80.00%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 1 GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
GTMK FHYE GQDCG FSWIMYEYSLDPS L T DIKDSYVL
Sbjct: 105 GTMKRFHYENGQDCGPFSWIMYEYSLDPSILPSTTTIDIKDSYVL 149
BLAST of MC10g1181 vs. ExPASy TrEMBL
Match: A0A6J1E162 (NAC transcription factor 29-like OS=Momordica charantia OX=3673 GN=LOC111025473 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.23e-14 Identity = 35/45 (77.78%), Postives = 35/45 (77.78%), Query Frame = 0
Query: 1 GTMKDFHYEKGQDCGQFSWIMYEYSLDPSNLLLDTKNDIKDSYVL 45
GTMK FHYE GQDC QFSWIMYEYSLDPS L DIKDSYVL
Sbjct: 108 GTMKRFHYENGQDCSQFSWIMYEYSLDPSILPSTNTIDIKDSYVL 152
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022145773.1 | 9.05e-15 | 80.00 | NAC domain-containing protein 12-like [Momordica charantia] | [more] |
| XP_022159029.1 | 4.61e-14 | 77.78 | NAC transcription factor 29-like [Momordica charantia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CWV5 | 4.38e-15 | 80.00 | NAC domain-containing protein 12-like OS=Momordica charantia OX=3673 GN=LOC11101... | [more] |
| A0A6J1E162 | 2.23e-14 | 77.78 | NAC transcription factor 29-like OS=Momordica charantia OX=3673 GN=LOC111025473 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| molecular_function |
GO:0003677 |
DNA binding |
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