Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAAGCTTCTCTTTCTCATGCTTCTTGGTGCTTTTGTTTGCACCACCGGAGCTCGGAAGCTCGCTGCCGATCCTTTTCAGGATGAGAAATTTTTCCACCACGGTGGTGGGTTAGGCGGTGGGTTTGGCGGAGGCGGTGGTGCGGGAGGTGGTCTTGGTGGTGGTGCTGGAGGCGGTGGCGGTCTAGGCGGAGGAGGAGGTCTCGGTGGAGGATCTGGATTTGGGGGTGGTGCTGGAGGTGGCAGTGGGCTAGGCGGAGGAGGCGGTCTTGGTGGAGGATCTGGATTTGGTGGTGGTGCTGGAGGCGGCGGTGGGCTAGGCGGGGGAGGCGGTCTCGGTGGAGGATCCGGATTTGGTGGTGGTGCTGGAGGCGGCGGTGGGCTAGGCGGGGGAGGTGGTCTCGGTGGAGGATCTGGATTTGGCGGTGGTGCTGGAGGTGGTGGTGGGCTA
mRNA sequence
ATGGCTTCCAAGCTTCTCTTTCTCATGCTTCTTGGTGCTTTTGTTTGCACCACCGGAGCTCGGAAGCTCGCTGCCGATCCTTTTCAGGATGAGAAATTTTTCCACCACGGTGGTGGGTTAGGCGGTGGGTTTGGCGGAGGCGGTGGTGCGGGAGGTGGTCTTGGTGGTGGTGCTGGAGGCGGTGGCGGTCTAGGCGGAGGAGGAGGTCTCGGTGGAGGATCTGGATTTGGGGGTGGTGCTGGAGGTGGCAGTGGGCTAGGCGGAGGAGGCGGTCTTGGTGGAGGATCTGGATTTGGTGGTGGTGCTGGAGGCGGCGGTGGGCTAGGCGGGGGAGGCGGTCTCGGTGGAGGATCCGGATTTGGTGGTGGTGCTGGAGGCGGCGGTGGGCTAGGCGGGGGAGGTGGTCTCGGTGGAGGATCTGGATTTGGCGGTGGTGCTGGAGGTGGTGGTGGGCTA
Coding sequence (CDS)
ATGGCTTCCAAGCTTCTCTTTCTCATGCTTCTTGGTGCTTTTGTTTGCACCACCGGAGCTCGGAAGCTCGCTGCCGATCCTTTTCAGGATGAGAAATTTTTCCACCACGGTGGTGGGTTAGGCGGTGGGTTTGGCGGAGGCGGTGGTGCGGGAGGTGGTCTTGGTGGTGGTGCTGGAGGCGGTGGCGGTCTAGGCGGAGGAGGAGGTCTCGGTGGAGGATCTGGATTTGGGGGTGGTGCTGGAGGTGGCAGTGGGCTAGGCGGAGGAGGCGGTCTTGGTGGAGGATCTGGATTTGGTGGTGGTGCTGGAGGCGGCGGTGGGCTAGGCGGGGGAGGCGGTCTCGGTGGAGGATCCGGATTTGGTGGTGGTGCTGGAGGCGGCGGTGGGCTAGGCGGGGGAGGTGGTCTCGGTGGAGGATCTGGATTTGGCGGTGGTGCTGGAGGTGGTGGTGGGCTA
Protein sequence
MASKLLFLMLLGAFVCTTGARKLAADPFQDEKFFHHGGGLGGGFGGGGGAGGGLGGGAGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGGGGLGGGSGFGGGAGGGGGLGGGGGLGGGSGFGGGAGGGGGL
Homology
BLAST of MC10g1073 vs. NCBI nr
Match:
XP_031737995.1 (glycine-rich protein 5 [Cucumis sativus] >KGN56074.1 hypothetical protein Csa_011582 [Cucumis sativus])
HSP 1 Score: 69.7 bits (169), Expect = 7.44e-12
Identity = 97/136 (71.32%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTTGARKLAADPFQDEKFFHHGG---GLGGGFGGGGGAGGGLGGG 60
MA KL FLMLLG F C TGARKLA DP +DEKFFH GG G GGG GGGGGAGGG GGG
Sbjct: 1 MACKLFFLMLLGVFFCATGARKLAHDPLKDEKFFHGGGLGGGGGGGLGGGGGAGGGFGGG 60
Query: 61 AGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGGGGLGGG 120
+ G GGGSGFGGGAGGG GGGGGLGGGS GGG G GGG GGG G GGG
Sbjct: 61 S----------GFGGGSGFGGGAGGG--YGGGGGLGGGS--GGGFGSGGGFGGGYGSGGG 120
Query: 121 SGFGGGAGGGGGLGGG 133
GFGGG+GGGGGLGGG
Sbjct: 121 GGFGGGSGGGGGLGGG 122
BLAST of MC10g1073 vs. NCBI nr
Match:
KAA0065825.1 (glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 68.6 bits (166), Expect = 3.41e-11
Identity = 107/156 (68.59%), Postives = 116/156 (74.36%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTT-GARKLAADPFQDEKFFHH----GGGLGGGFGGG--GGAGGG 60
MASK++FL+ LGAF+ TT GARKL+ FQDEKFFH GGGLGGG GGG GG GGG
Sbjct: 1 MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRYGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGGAGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGGGG 120
LGGG+ GGG GGGSGFGGG GGG+G GGGGG GGG GGGGLGGG G
Sbjct: 61 LGGGS--------GGGFGGGSGFGGGVGGGAGGGGGGGFGGG--------GGGGLGGGSG 120
Query: 121 LGGGSGFGGGAGGGGGLGGGGGLGGGSGFGGGAGGG 149
GGG+GFGGG+GGGGGLGGGGG GGG GFGGG GGG
Sbjct: 121 FGGGAGFGGGSGGGGGLGGGGGAGGGGGFGGGGGGG 140
BLAST of MC10g1073 vs. NCBI nr
Match:
XP_012070859.1 (glycine-rich cell wall structural protein [Jatropha curcas] >KDP39153.1 hypothetical protein JCGZ_00910 [Jatropha curcas])
HSP 1 Score: 67.4 bits (163), Expect = 1.04e-10
Identity = 77/110 (70.00%), Postives = 83/110 (75.45%), Query Frame = 0
Query: 3 SKLLFLMLLGAFVCTTG-ARKLAADPFQDEKFFHHGGGLGGGFGGGGGAGGGLGGGAGGG 62
SKLL ++LLGA VCTT ARKL + F+DEK HGGGLGGG GGGGGAGGGLGGG+
Sbjct: 6 SKLLLVLLLGALVCTTSFARKLVSSSFRDEKNLFHGGGLGGGLGGGGGAGGGLGGGS--- 65
Query: 63 GGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGG 111
GLGGG+GFGGGAG G G G GGG GGG GFGGGAGGGGGLGGG
Sbjct: 66 -------GLGGGAGFGGGAGAGGGAGLGGGAGGGGGFGGGAGGGGGLGGG 105
BLAST of MC10g1073 vs. NCBI nr
Match:
XP_022151305.1 (glycine-rich protein 5 [Momordica charantia])
HSP 1 Score: 63.2 bits (152), Expect = 3.57e-09
Identity = 103/161 (63.98%), Postives = 109/161 (67.70%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTTG-ARKLAADPFQDEKFFHH----------------GGGLGGG 60
MASK+LFL+LL AF+CTT ARKL F D+KFFH GGGLGGG
Sbjct: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
Query: 61 FGGG----GGAGGGLGGGAGGG-----GGLGGGGGLGGGSG--FGGGAGGGSGLGGGGGL 120
FGGG GGAGGG GGGAGGG GGLGGGGG+GGG+G FGGGAG G GLGGGGG
Sbjct: 61 FGGGSGFGGGAGGGAGGGAGGGFGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGA 120
Query: 121 GGGSGFGGGAGGGGGLGGGGGLGGGSGFGGGAGGGGGLGGG 133
GGG GFGGG GGG LGGGSGFGGGAG GGG GGG
Sbjct: 121 GGGGGFGGGRGGG--------LGGGSGFGGGAGAGGGFGGG 153
BLAST of MC10g1073 vs. NCBI nr
Match:
PSS06125.1 (hypothetical protein CEY00_Acc19398 [Actinidia chinensis var. chinensis])
HSP 1 Score: 60.5 bits (145), Expect = 3.17e-08
Identity = 76/108 (70.37%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTTGARKLAADP---FQDEKFFHHGGGLGGGFGGGGGAGGGLGGG 60
M SK L L+LLGA VCTT +RKL + F+D KFF GGGLGGG G GGG GGGLGGG
Sbjct: 1 MTSKFLLLVLLGALVCTTSSRKLVSTTKGSFEDSKFFGPGGGLGGGGGFGGGGGGGLGGG 60
Query: 61 AGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGG 105
G GGG G GGG+GGG G GGG GGG G GGGGGLGGGSGFGGG GGG
Sbjct: 61 GGAGGGSGFGGGVGGGGGLGGGGGGGFGGGGGGGLGGGSGFGGGVGGG 108
BLAST of MC10g1073 vs. ExPASy TrEMBL
Match:
A0A0A0L4Y2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064230 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 3.60e-12
Identity = 97/136 (71.32%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTTGARKLAADPFQDEKFFHHGG---GLGGGFGGGGGAGGGLGGG 60
MA KL FLMLLG F C TGARKLA DP +DEKFFH GG G GGG GGGGGAGGG GGG
Sbjct: 1 MACKLFFLMLLGVFFCATGARKLAHDPLKDEKFFHGGGLGGGGGGGLGGGGGAGGGFGGG 60
Query: 61 AGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGGGGLGGG 120
+ G GGGSGFGGGAGGG GGGGGLGGGS GGG G GGG GGG G GGG
Sbjct: 61 S----------GFGGGSGFGGGAGGG--YGGGGGLGGGS--GGGFGSGGGFGGGYGSGGG 120
Query: 121 SGFGGGAGGGGGLGGG 133
GFGGG+GGGGGLGGG
Sbjct: 121 GGFGGGSGGGGGLGGG 122
BLAST of MC10g1073 vs. ExPASy TrEMBL
Match:
A0A5A7VJD1 (Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G001320 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 1.65e-11
Identity = 107/156 (68.59%), Postives = 116/156 (74.36%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTT-GARKLAADPFQDEKFFHH----GGGLGGGFGGG--GGAGGG 60
MASK++FL+ LGAF+ TT GARKL+ FQDEKFFH GGGLGGG GGG GG GGG
Sbjct: 1 MASKIVFLVFLGAFLFTTSGARKLSTASFQDEKFFHRPRYGGGGLGGGGGGGFGGGGGGG 60
Query: 61 LGGGAGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGGGG 120
LGGG+ GGG GGGSGFGGG GGG+G GGGGG GGG GGGGLGGG G
Sbjct: 61 LGGGS--------GGGFGGGSGFGGGVGGGAGGGGGGGFGGG--------GGGGLGGGSG 120
Query: 121 LGGGSGFGGGAGGGGGLGGGGGLGGGSGFGGGAGGG 149
GGG+GFGGG+GGGGGLGGGGG GGG GFGGG GGG
Sbjct: 121 FGGGAGFGGGSGGGGGLGGGGGAGGGGGFGGGGGGG 140
BLAST of MC10g1073 vs. ExPASy TrEMBL
Match:
A0A067KVZ9 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00910 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 5.03e-11
Identity = 77/110 (70.00%), Postives = 83/110 (75.45%), Query Frame = 0
Query: 3 SKLLFLMLLGAFVCTTG-ARKLAADPFQDEKFFHHGGGLGGGFGGGGGAGGGLGGGAGGG 62
SKLL ++LLGA VCTT ARKL + F+DEK HGGGLGGG GGGGGAGGGLGGG+
Sbjct: 6 SKLLLVLLLGALVCTTSFARKLVSSSFRDEKNLFHGGGLGGGLGGGGGAGGGLGGGS--- 65
Query: 63 GGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGGGGLGGG 111
GLGGG+GFGGGAG G G G GGG GGG GFGGGAGGGGGLGGG
Sbjct: 66 -------GLGGGAGFGGGAGAGGGAGLGGGAGGGGGFGGGAGGGGGLGGG 105
BLAST of MC10g1073 vs. ExPASy TrEMBL
Match:
A0A6J1DAT8 (glycine-rich protein 5 OS=Momordica charantia OX=3673 GN=LOC111019269 PE=4 SV=1)
HSP 1 Score: 63.2 bits (152), Expect = 1.73e-09
Identity = 103/161 (63.98%), Postives = 109/161 (67.70%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTTG-ARKLAADPFQDEKFFHH----------------GGGLGGG 60
MASK+LFL+LL AF+CTT ARKL F D+KFFH GGGLGGG
Sbjct: 1 MASKILFLVLLSAFLCTTSWARKLTTTSFHDQKFFHRPGFGGGGGGGGFGGGGGGGLGGG 60
Query: 61 FGGG----GGAGGGLGGGAGGG-----GGLGGGGGLGGGSG--FGGGAGGGSGLGGGGGL 120
FGGG GGAGGG GGGAGGG GGLGGGGG+GGG+G FGGGAG G GLGGGGG
Sbjct: 61 FGGGSGFGGGAGGGAGGGAGGGFGGGGGGLGGGGGIGGGAGGGFGGGAGAGGGLGGGGGA 120
Query: 121 GGGSGFGGGAGGGGGLGGGGGLGGGSGFGGGAGGGGGLGGG 133
GGG GFGGG GGG LGGGSGFGGGAG GGG GGG
Sbjct: 121 GGGGGFGGGRGGG--------LGGGSGFGGGAGAGGGFGGG 153
BLAST of MC10g1073 vs. ExPASy TrEMBL
Match:
A0A2R6QDG5 (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc19398 PE=4 SV=1)
HSP 1 Score: 60.5 bits (145), Expect = 1.53e-08
Identity = 76/108 (70.37%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 1 MASKLLFLMLLGAFVCTTGARKLAADP---FQDEKFFHHGGGLGGGFGGGGGAGGGLGGG 60
M SK L L+LLGA VCTT +RKL + F+D KFF GGGLGGG G GGG GGGLGGG
Sbjct: 1 MTSKFLLLVLLGALVCTTSSRKLVSTTKGSFEDSKFFGPGGGLGGGGGFGGGGGGGLGGG 60
Query: 61 AGGGGGLGGGGGLGGGSGFGGGAGGGSGLGGGGGLGGGSGFGGGAGGG 105
G GGG G GGG+GGG G GGG GGG G GGGGGLGGGSGFGGG GGG
Sbjct: 61 GGAGGGSGFGGGVGGGGGLGGGGGGGFGGGGGGGLGGGSGFGGGVGGG 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_031737995.1 | 7.44e-12 | 71.32 | glycine-rich protein 5 [Cucumis sativus] >KGN56074.1 hypothetical protein Csa_01... | [more] |
KAA0065825.1 | 3.41e-11 | 68.59 | glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa] | [more] |
XP_012070859.1 | 1.04e-10 | 70.00 | glycine-rich cell wall structural protein [Jatropha curcas] >KDP39153.1 hypothet... | [more] |
XP_022151305.1 | 3.57e-09 | 63.98 | glycine-rich protein 5 [Momordica charantia] | [more] |
PSS06125.1 | 3.17e-08 | 70.37 | hypothetical protein CEY00_Acc19398 [Actinidia chinensis var. chinensis] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L4Y2 | 3.60e-12 | 71.32 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064230 PE=4 SV=1 | [more] |
A0A5A7VJD1 | 1.65e-11 | 68.59 | Glycine-rich cell wall structural protein-like OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A067KVZ9 | 5.03e-11 | 70.00 | Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00910 PE=4 SV=1 | [more] |
A0A6J1DAT8 | 1.73e-09 | 63.98 | glycine-rich protein 5 OS=Momordica charantia OX=3673 GN=LOC111019269 PE=4 SV=1 | [more] |
A0A2R6QDG5 | 1.53e-08 | 70.37 | Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0... | [more] |
Match Name | E-value | Identity | Description | |