MC10g0941 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC10g0941
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionWinged helix-turn-helix DNA-binding domain containing protein
LocationMC10: 8133484 .. 8133818 (+)
RNA-Seq ExpressionMC10g0941
SyntenyMC10g0941
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATATGGGAGGCAGAGGAGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGGTCTGTGCCATAGGGAGTGCAATTGGTATTCTCTCTTAACCTCTTCGCACATGAATTCTTGATAAGTAACTCATTTGTACGAAGTTGTCACCTAATTAGTTGAGAGTAAAGTAACATTTTTTATCTTCTTATAAGCTATGTCCAATTTCCCCAACTTTGTAATCAACGTCGCTTGTGTAGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGGCTGAGAGTCTGAATGATGTAGAATCAGGAGGTACTGGTGAAAATGTT

mRNA sequence

GATATGGGAGGCAGAGGAGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGGTCTGTGCCATAGGGAGTGCAATTGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGGCTGAGAGTCTGAATGATGTAGAATCAGGAGGTACTGGTGAAAATGTT

Coding sequence (CDS)

GATATGGGAGGCAGAGGAGTTATTGGTGATAAATGGTCCATGAGGGTTCTCTGGGTCTGTGCCATAGGGAGTGCAATTGGTTTGTATATGGTTGCTCAAGAAAGACAATTACAGAACAGGCAAAGAATGTTGGCTGAGAGTCTGAATGATGTAGAATCAGGAGGTACTGGTGAAAATGTT

Protein sequence

DMGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV
Homology
[Close]
BLAST of MC10g0941 vs. NCBI nr
Match: XP_022142863.1 (uncharacterized protein LOC111012874 [Momordica charantia] >XP_022142864.1 uncharacterized protein LOC111012874 [Momordica charantia])

HSP 1 Score: 121 bits (303), Expect = 1.57e-34
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 59

[Close]
BLAST of MC10g0941 vs. NCBI nr
Match: XP_038903238.1 (uncharacterized protein LOC120089884 [Benincasa hispida])

HSP 1 Score: 115 bits (287), Expect = 4.36e-32
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSAIGLYMVAQERQLQNRQRMLAESL D ESGG+GENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRQRMLAESLKDAESGGSGENV 59

[Close]
BLAST of MC10g0941 vs. NCBI nr
Match: XP_022929341.1 (uncharacterized protein LOC111435944 [Cucurbita moschata] >XP_023551825.1 uncharacterized protein LOC111809676 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114 bits (284), Expect = 1.25e-31
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSA+GLYMVAQERQLQNR RMLAESL DVESGG+GENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAVGLYMVAQERQLQNRARMLAESLKDVESGGSGENV 59

[Close]
BLAST of MC10g0941 vs. NCBI nr
Match: XP_022943152.1 (uncharacterized protein LOC111447969 [Cucurbita moschata] >XP_022943153.1 uncharacterized protein LOC111447969 [Cucurbita moschata])

HSP 1 Score: 114 bits (284), Expect = 1.25e-31
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSAIGLYMV+QERQLQNR+RMLAESL DVESGG+GENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVSQERQLQNRRRMLAESLKDVESGGSGENV 59

[Close]
BLAST of MC10g0941 vs. NCBI nr
Match: XP_023540165.1 (uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo] >XP_023540174.1 uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114 bits (284), Expect = 1.25e-31
Identity = 55/59 (93.22%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSAIGLYMVAQERQLQNRQRMLAESL DVESGG GE+V
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVAQERQLQNRQRMLAESLKDVESGGCGESV 59

[Close]
BLAST of MC10g0941 vs. ExPASy TrEMBL
Match: A0A6J1CPB9 (uncharacterized protein LOC111012874 OS=Momordica charantia OX=3673 GN=LOC111012874 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 7.62e-35
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 59

[Close]
BLAST of MC10g0941 vs. ExPASy TrEMBL
Match: A0A6J1FS83 (uncharacterized protein LOC111447969 OS=Cucurbita moschata OX=3662 GN=LOC111447969 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 6.07e-32
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSAIGLYMV+QERQLQNR+RMLAESL DVESGG+GENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAIGLYMVSQERQLQNRRRMLAESLKDVESGGSGENV 59

[Close]
BLAST of MC10g0941 vs. ExPASy TrEMBL
Match: A0A6J1EMV3 (uncharacterized protein LOC111435944 OS=Cucurbita moschata OX=3662 GN=LOC111435944 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 6.07e-32
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSA+GLYMVAQERQLQNR RMLAESL DVESGG+GENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAVGLYMVAQERQLQNRARMLAESLKDVESGGSGENV 59

[Close]
BLAST of MC10g0941 vs. ExPASy TrEMBL
Match: A0A6J1J744 (uncharacterized protein LOC111483159 OS=Cucurbita maxima OX=3661 GN=LOC111483159 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 2.48e-31
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIGDKWSMRVLWVCA+GSA+G YMVAQERQLQNR RMLAESL DVESGG+GENV
Sbjct: 1  MGGRGVIGDKWSMRVLWVCALGSAVGFYMVAQERQLQNRARMLAESLKDVESGGSGENV 59

[Close]
BLAST of MC10g0941 vs. ExPASy TrEMBL
Match: A0A6J1KQV7 (uncharacterized protein LOC111496793 OS=Cucurbita maxima OX=3661 GN=LOC111496793 PE=4 SV=1)

HSP 1 Score: 108 bits (271), Expect = 5.86e-30
Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 60
          MGGRGVIG KW MRVLWVCA+GSAIGLYMVAQERQLQNRQRMLAESL DVESGG GE+V
Sbjct: 1  MGGRGVIGHKWFMRVLWVCALGSAIGLYMVAQERQLQNRQRMLAESLKDVESGGCGESV 59

[Close]
BLAST of MC10g0941 vs. TAIR 10
Match: AT3G15395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 61
          MG RG+I DKWSMR+LW CAIGSAIGLYMVA ERQ QNR R +AESL   ES G G+NV
Sbjct: 1  MGSRGIINDKWSMRILWGCAIGSAIGLYMVAVERQTQNRARAMAESLRAAESQGDGDNV 59

[Close]
BLAST of MC10g0941 vs. TAIR 10
Match: AT3G15395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 61
          MG RG+I DKWSMR+LW CAIGSAIGLYMVA ERQ QNR R +AESL   ES G G+NV
Sbjct: 1  MGSRGIINDKWSMRILWGCAIGSAIGLYMVAVERQTQNRARAMAESLRAAESQGDGDNV 59

[Close]
BLAST of MC10g0941 vs. TAIR 10
Match: AT3G15395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 61
          MG RG+I DKWSMR+LW CAIGSAIGLYMVA ERQ QNR R +AESL   ES G G+NV
Sbjct: 1  MGSRGIINDKWSMRILWGCAIGSAIGLYMVAVERQTQNRARAMAESLRAAESQGDGDNV 59

[Close]
BLAST of MC10g0941 vs. TAIR 10
Match: AT3G15395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-18
Identity = 43/59 (72.88%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 2  MGGRGVIGDKWSMRVLWVCAIGSAIGLYMVAQERQLQNRQRMLAESLNDVESGGTGENV 61
          MG RG+I DKWSMR+LW CAIGSAIGLYMVA ERQ QNR R +AESL   ES G G+NV
Sbjct: 1  MGSRGIINDKWSMRILWGCAIGSAIGLYMVAVERQTQNRARAMAESLRAAESQGDGDNV 59

The following BLAST results are available for this feature:
BLAST of MC10g0941 vs.
Match NameE-valueIdentityDescription
BLAST of MC10g0941 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022142863.11.57e-34100.00uncharacterized protein LOC111012874 [Momordica charantia] >XP_022142864.1 uncha... [more]
XP_038903238.14.36e-3293.22uncharacterized protein LOC120089884 [Benincasa hispida][more]
XP_022929341.11.25e-3191.53uncharacterized protein LOC111435944 [Cucurbita moschata] >XP_023551825.1 unchar... [more]
XP_022943152.11.25e-3191.53uncharacterized protein LOC111447969 [Cucurbita moschata] >XP_022943153.1 unchar... [more]
XP_023540165.11.25e-3193.22uncharacterized protein LOC111800616 [Cucurbita pepo subsp. pepo] >XP_023540174.... [more]
BLAST of MC10g0941 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CPB97.62e-35100.00uncharacterized protein LOC111012874 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A6J1FS836.07e-3291.53uncharacterized protein LOC111447969 OS=Cucurbita moschata OX=3662 GN=LOC1114479... [more]
A0A6J1EMV36.07e-3291.53uncharacterized protein LOC111435944 OS=Cucurbita moschata OX=3662 GN=LOC1114359... [more]
A0A6J1J7442.48e-3189.83uncharacterized protein LOC111483159 OS=Cucurbita maxima OX=3661 GN=LOC111483159... [more]
A0A6J1KQV75.86e-3089.83uncharacterized protein LOC111496793 OS=Cucurbita maxima OX=3661 GN=LOC111496793... [more]
BLAST of MC10g0941 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G15395.11.1e-1872.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15395.21.1e-1872.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15395.31.1e-1872.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G15395.41.1e-1872.88unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC10g0941.1MC10g0941.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding