MC09g_new0351 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGTAAGATAAGTTCTTGAATTACATCAAAGATATGGCATTGCCGTTGGAATTGCTATTGGGCTGCATTTTTTGCATGAAGAATGTCTTATAGGTCCTTTAATACATAGAGATGTCCATCGAAGCAACATACTGCTCGCACATGATTTTGTTCCATAATCCGAAAGTGACTTGGGAGGAGAAGGAGGAGTGTCAGGATTCTAGTTGCCCCTCATCCCATGACGAAGTGTGGAAATCATGGCGGCCTTGATTGAGTGCCCCTCTAAAATCCCTGGCAAACTCGGGCTCGGGATCTTGTACAATGGGAAGCCCCTCTTCTCTTCGTCTATTGCTCGAGCGATAGCAGCAAATTGCAGGCTCGAGAGACCTAAAATATGAAAATATGAAAATGGAAGGACTCCAAGAAGAAGTCAAGCCGGAGGCCAAGAAAAGCGAGCTTGGTAAATAATTAATCGCATCCTTTTCTTCTATTACTATATAGGCTTTTCAAGGCTTGGTCATCAAACCATTAATGTTAAATTTTTCCAGCTTCCTAGATTTGTGGTCGATTTTTTTTGTTCTGGAGCAATTATGATTAGATTTTAATAGATCCATTAAAATTTGACTCTAAATTTATAATTTACGCAGAATATTATTTCGGTGGGTGCTTACCTGTGCGCCAATCAAAAGAATGTACCGTTATGCGAGGGATTCAAGTTCCAGCCGTTCGATTGATTCATGGGTGTGACTGCTGCCTCAATACTCAGTCGCCTCTTCCAAATTAGTCCTCCTCTCGCACGCTTGTTGAGGCTCGAAAGGTTGAGTCTCATTTGGTTATGTTTCGCCCCACGTCGCCTATTTTTCTGTTGAATCAAGCCATTGAAGCCTATGGTAAATGTGGGTGTTTGGAGGATGCAGGGGAGTTGTTCGAGGAAATGCCTCATAGAGATGGGGGATCGTCGAATGCGATGATAACAGCATATACCCAGAATGGGTATGCTTTGGGAGCATTGAATTTGTTTTCGGATATGAATGAATCTGGTGTTCGTGCTACTGAGATATTTTTAGCCAGTATTCTTGGGTCTTGCGGAGCTGCATTGGCTCTTCACTTTTCGAGGCAAATTCACGGGCATATTGTGAAATCTTGCTTCCTTGGCATTGTAATTCTTGAGAATTCTCTTGTTGATGTCTATGGAAAGTGCAGGCTTATAAATGATGCACGCAGCATATTTGATGAAATTTAGAAGTGCGATGAATGTGAATGTTAGGTGTTATCTTGAGGTGGGCAATGGAAGAGAGGCAGTGTCGTGTCGATGTTTTACCAAATGTTCCGAGAAGAAGTGATTCCATTGAGTTTTACCTTTTCTTGCTTGTTCAAGTATGGCAGCACTTGTACAAGGTATGCAAATTCATGGTGGTGTAGTTAAAGTAGGTTTTGAAGAGGATGATGTTATTTCAAGCTCTTTAATTGACATGCATATGAAGTGTGGAACATTAGAAAATGCTCACCAAGTATTTAACCAGCCCAATTCAAGTAATCTGATTTCCTGGACTTCACTGTTACATGGATACATGCTAGGAAAGTCCAAAAGCTAGGGAGCTTTTCAATGAAATGCCTGAACGCAATGTGATTTCATGGAATGCTATGTTGGCAGGATATGTTGATTCCTCTCAATGGGAAGAGGCGTTAGACTTTGTCCATTTGATGTGCAGTTCGATTAAGGAAATTGATCACGTAACTCTTCGCCTGATACTGAATGTGTGTACCGACCGTCTAGATGTTGCAATAGGGAAGCAGGTTCATGGTTTTGTTTATAAAATTGGTTTCTATGCTGATCTCTATATTGGTAGTGCTCTTCTTGCATGTATGGTAAATGTGGGAGCTTGAAAAGTACCAGGGTTTGGTTTTACCGAATGAGTCAATGGCGAGATGAAGTTTCCTGGAATGCTCTGGTGTCACTAGCTATGCTCGTCGTGGCATGAGTGAACAGGCCATGACGGTTTTATCAGAGATGCAATGGGAAACAACTCCTAGTAAATTCACTTTTGCAACTATTTTATGAGCCTGTGCAAACACTTGTGCAATAGAGCAAGGCAAGCAAATCCATGGCCTCATGATTAGGAGTAAATTGTGAGAGAGACATTGTAATTACCGGAGCTTTAGTTGACATGTACTGCAGATGCCTTTATCTTGAGTACGCTCTCAAGGTTTTTGAAAATGCATCTTCCCGTGATGTGATTCTGTGGAACTCTATAATTTTAGGATGTTGCCACAACAAAAGGGACGATAGTAATCGAGTTATTTCGATTGATGACAATGGAGGAAGGCGTGAAACCAGGCCATGTGACCTTTCAAGGTATTTTGCTTCCTTGTGTATATGAAAATCTTGTTGAGTTGGGTAGGTAGTATTTTGATTCAATGAGTGACATACCTCGACTGGAGCACTACGAGTGCATGAATGCGACATTGAATCATGGACAAGCTAAAAAATTTAGAAAATACTTGGCTCCTCAACAGTAAAGAACAATCATTGTCTTAAACTATATGGGTTGTTTGGTCTCGTTCGACGTTCATGGGGTATTGAAAGTTTTTCATGAAATTAAAGAGAATGACATTATATCCTGGAACATATGTTTGAAGGGTTTGTTTCGATTTGAGTGATGTTGAAGGTCCACGCCATCTGTTTGATGTAATGACG ATGGCAGCACTTGTACAAGGTATGCAAATTCATGGTGGTGTAGTTAAAGTAGGTTTTGAAGAGGATGATGTTATTTCAAGCTCTTTAATTGACATGCATATGAAGTGTGGAACATTAGAAAATGCTCACCAAGTATTTAACCAGCCCAATTCAAGTAATCTGATTTCCTGGACTTCACTGTTACATGGATACATGCTAGGAAAGTCCAAAAGCTAG ATGGCAGCACTTGTACAAGGTATGCAAATTCATGGTGGTGTAGTTAAAGTAGGTTTTGAAGAGGATGATGTTATTTCAAGCTCTTTAATTGACATGCATATGAAGTGTGGAACATTAGAAAATGCTCACCAAGTATTTAACCAGCCCAATTCAAGTAATCTGATTTCCTGGACTTCACTGTTACATGGATACATGCTAGGAAAGTCCAAAAGCTAG MAALVQGMQIHGGVVKVGFEEDDVISSSLIDMHMKCGTLENAHQVFNQPNSSNLISWTSLLHGYMLGKSKS Homology
BLAST of MC09g_new0351 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-09 Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-09 Identity = 24/58 (41.38%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy Swiss-Prot
Match: Q9LR69 (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E4 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-09 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy Swiss-Prot
Match: O04659 (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 5.3e-09 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy Swiss-Prot
Match: Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 5.3e-09 Identity = 24/59 (40.68%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of MC09g_new0351 vs. NCBI nr
Match: XP_022141462.1 (pentatricopeptide repeat-containing protein At3g26540-like [Momordica charantia] >XP_022141463.1 pentatricopeptide repeat-containing protein At3g26540-like [Momordica charantia]) HSP 1 Score: 123 bits (309), Expect = 9.58e-31 Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = 0
BLAST of MC09g_new0351 vs. NCBI nr
Match: XP_023550069.1 (pentatricopeptide repeat-containing protein At3g26540 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 108 bits (269), Expect = 2.60e-25 Identity = 50/66 (75.76%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of MC09g_new0351 vs. NCBI nr
Match: XP_022938461.1 (pentatricopeptide repeat-containing protein At3g26540 [Cucurbita moschata]) HSP 1 Score: 107 bits (266), Expect = 6.63e-25 Identity = 49/66 (74.24%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of MC09g_new0351 vs. NCBI nr
Match: KAG6578928.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107 bits (266), Expect = 6.75e-25 Identity = 49/66 (74.24%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of MC09g_new0351 vs. NCBI nr
Match: KAG7016451.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107 bits (266), Expect = 6.76e-25 Identity = 49/66 (74.24%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy TrEMBL
Match: A0A6J1CJX1 (pentatricopeptide repeat-containing protein At3g26540-like OS=Momordica charantia OX=3673 GN=LOC111011852 PE=4 SV=1) HSP 1 Score: 123 bits (309), Expect = 4.64e-31 Identity = 59/66 (89.39%), Postives = 64/66 (96.97%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy TrEMBL
Match: A0A6J1FD79 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita moschata OX=3662 GN=LOC111444693 PE=4 SV=1) HSP 1 Score: 107 bits (266), Expect = 3.21e-25 Identity = 49/66 (74.24%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy TrEMBL
Match: A0A6J1K1B7 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucurbita maxima OX=3661 GN=LOC111489740 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 2.85e-24 Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy TrEMBL
Match: A0A5D3DJG9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001110 PE=4 SV=1) HSP 1 Score: 101 bits (251), Expect = 3.44e-23 Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of MC09g_new0351 vs. ExPASy TrEMBL
Match: A0A1S3B4H5 (pentatricopeptide repeat-containing protein At3g26540 OS=Cucumis melo OX=3656 GN=LOC103485666 PE=4 SV=1) HSP 1 Score: 101 bits (251), Expect = 3.44e-23 Identity = 47/64 (73.44%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of MC09g_new0351 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10 Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of MC09g_new0351 vs. TAIR 10
Match: AT1G03540.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 1.7e-10 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of MC09g_new0351 vs. TAIR 10
Match: AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 1.7e-10 Identity = 24/58 (41.38%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of MC09g_new0351 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). ) HSP 1 Score: 62.4 bits (150), Expect = 1.7e-10 Identity = 24/58 (41.38%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of MC09g_new0351 vs. TAIR 10
Match: AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein ) HSP 1 Score: 61.2 bits (147), Expect = 3.8e-10 Identity = 24/59 (40.68%), Postives = 42/59 (71.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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