MC09g_new0087 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC09g_new0087
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Location	MC09: 3447024 .. 3450569 (+)
RNA-Seq Expression	MC09g_new0087
Synteny	MC09g_new0087

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATCGGCAGAGGGGTGGAAGTGCAAAGTCTTATCCAACCTTCTTCCACACATTCTGAAGATCACATGGCCTGATAGCAAACGGTATGGAAATTCAATTCAAACCCACCAAAAAGCTTACTCAGAAGAGCTACAATCCATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCCCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTAAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGGTTGGTTCATCTCCTCTGCAACATCTGACCTTGAAAATTGAAATTGAAGCCGGGTTCTAGGGATTGAGCTTCTTTAACTTAGATATTAATGGACATTAATGGCTTTTTTCTTTTCCTCTGACTCCTGTCTTGTGATGGTCGAAGAAATTAGAAAAATTTCAGTACAATGGTAGCATGTTAAATCACAGATGGACCCAAAAGCGCTCTAATACAATTTTAAACATGATAAAATTACCAATGAATCCAAAAACTTAAGTTGATAGCTTAAAATAATGAAAATACTTTCATGTCAATAGCATTCAAGAGAGGTGTGGGGTTCCTTAAATAAAATAACACATTACTTGACGAGGATGTGTCAAATTGTGAATGGAAAGAATATGTATTACTGTAGTACTAGAAAATTTCTCAAGGAAATTGGGACTGATTTGAGTGCTGCAACTTGTTTTTGTTGCAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTGAGGATATTTTATGTTTTTGCTAAGAATTCATCAAAAAGAATCTTATATACTCTTTCCCTCTTAGTTGCAGATGCCCATGCTTTGATTCGAAAGCCCTCGCCTGAATCCATCAATTTAAGTTTTTGGGTGATTTAATATGCTTAAGATGGTAACCATTATGGGATGACCTAGTGGTCAATAAGGGCCAATGTAAATAGCAAAGGGCTTAGAGGGAAGGCCGCAAGCTGGCCGGACACATGGATATAAAAAAAAAAAACAAAAAAAAAATGCTTAAGATGGTATCAGAGTAGGAGGTTCTGTGTTCGAACCCTTGGGTTGTCATCTCCTTCTCGTTTAATATTGATTTCGACTTGTTGGGCCTTTTGCAAATTTTCAAGCCCACAAATGAGAGGAGTATTAGATATCTTATGAATGATTAAATTTACCCTAAATTTAAACTTTTAGGTTCATTAGGTGATTTAACATTTAACATATTTGATGTTAGTTTTATATAGTATAAAGTAATTCTTTGTGATGTCATTTTCTTTCCAATTAATATTGATAGTTGGTATCATGATAATTTTCAAACTCATGAAGGAGGGCAACGATAATGCGTATAAAAGATCAAATATACCGTAACTTATTGGTATAAGCTTTTAGGTTTGGTATATACCAAGTTTTTAGGTTTAGTGCATAGTTTAAAGTTCTAAATTCATAAACATTAGATTATTCGTCTAATCTTACTTGATATGTGGAGTACGTTTTACCAGTAAATGAGTGAGGTACGGCTTTTATCATGATAACAAGAAGTAGTTTCTAAGTGAAAAGTTAAAACTGAAGAACTAAAGAGAAATAGCTAGCTCAAATTATTACTTCTTTTCATGTCTTGAAGGCTAATTTCCATGATTTAGGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTTCCTCCGCTCAAAGTTTTGATTTCGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATCGAATCAGATTCCAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGTAGATATTATGTCAGTTCCTTACTTATAACCTGAAGGTAATTAAAAGTAACATGATTCTGCTTCTCCTTTCACTCTTTTTCTGATGATAACACTTTGTTATTGAATCTAAAAACAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGTCGAGGAAGAGGTCGGGGATGATGCTGGCATCTTATTTATCACAACCCCGGGACAGGTATTGATGATGATCCATCATCTTCTTTAAGTATCAAAAAAGATGGATGCAGAAGAACGATCTTGAATAAGAAAGAAAGGGAATTAACACCTAACAGTTAAATCAGTTGATGAAAGTCAATGATCTCACCACACCATTCTTAACTGCCATCTGCAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGGTCTTGATTTGTTTCTCTTTCACATGAACTCAGTAGTTTGCTTCCTGACCTTAAAATCTTCCATTTGCTAGAAGTTTAAAAAGGAACTGTCCTTGACATGTGTCTGTGGTGCCATTCTGTTTGCAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTTGTTCCCGATGCCGAGTCAAAGAGATGCATCACGGTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCTTTTTAGTGAGTTGACATCATAGATTTCTGTTTATATCATCTTGATGGTGTTCTTTCATTTTGTTCCCCTTCTGTTACCATCAGTTGTAACTGTATATCAAAGCATTGAAGAAGAGAGGTAATTGTATATGTTCTGTTTGGTCAAAGTTATTTTTCTTTGATTTCTTTTACCTTGCTTTCAAGAATTACTGAAATTGTTATTCATTTGAAAATAACAAGTCTACAAATAATTTCAACTTAGCTTGAAAA

mRNA sequence

ATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCCCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTAAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTTCCTCCGCTCAAAGTTTTGATTTCGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATCGAATCAGATTCCAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGTCGAGGAAGAGGTCGGGGATGATGCTGGCATCTTATTTATCACAACCCCGGGACAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTTGTTCCCGATGCCGAGTCAAAGAGATGCATCACGGTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCTTTTTAG

Coding sequence (CDS)

ATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCCCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTAAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTTCCTCCGCTCAAAGTTTTGATTTCGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATCGAATCAGATTCCAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGTCGAGGAAGAGGTCGGGGATGATGCTGGCATCTTATTTATCACAACCCCGGGACAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTTGTTCCCGATGCCGAGTCAAAGAGATGCATCACGGTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCTCTAGCTCTTGCTTTTTAG

Protein sequence

MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

Homology

[Close]

BLAST of MC09g_new0087 vs. ExPASy Swiss-Prot
Match: Q9S9N6 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB1 PE=2 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 1.6e-186
Identity = 337/466 (72.32%), Postives = 383/466 (82.19%), Query Frame = 0


Query: 6   SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPW 65
           SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFL--NFQTRLTSRSSDVSVNLKKKNNPW 62

Query: 66  FDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRGD 125
            DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGD
Sbjct: 63  LDPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGD 122

Query: 126 VRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDP 185
           VRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDP
Sbjct: 123 VRRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDP 182

Query: 186 DDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGA 245
           DD++PEPAEYTDM+GLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGA
Sbjct: 183 DDHWPEPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGA 242

Query: 246 GLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEK 305
           GL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+V ISRK+KEVV  K
Sbjct: 243 GLMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAK 302

Query: 306 YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEK 365
           Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEK
Sbjct: 303 YRNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEK 362

Query: 366 ERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDE 425
           ERENVE+ VGDD  I+FITTPGQLAALINDSAG+IATNTAAIQLA AR+KP I LFSS+E
Sbjct: 363 ERENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEE 422

Query: 426 KAKLFVPDAESK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL 470
           K KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Sbjct: 423 KGKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

[Close]

BLAST of MC09g_new0087 vs. NCBI nr
Match: XP_022145001.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia])

HSP 1 Score: 936 bits (2419), Expect = 0.0
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0


Query: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK 60
           MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK
Sbjct: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK 60

Query: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120
           KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK
Sbjct: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120

Query: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180
           LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN
Sbjct: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180

Query: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240
           VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN
Sbjct: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240

Query: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 300
           AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV
Sbjct: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 300

Query: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360
           VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI
Sbjct: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360

Query: 361 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420
           PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF
Sbjct: 361 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420

Query: 421 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of MC09g_new0087 vs. NCBI nr
Match: XP_022953552.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 865 bits (2236), Expect = 1.63e-315
Identity = 432/470 (91.91%), Postives = 452/470 (96.17%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV 302
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           S+EKAKLFVPD+E+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MC09g_new0087 vs. NCBI nr
Match: KAG6575629.1 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014183.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 865 bits (2235), Expect = 1.63e-315
Identity = 432/470 (91.91%), Postives = 451/470 (95.96%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV 302
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           S+EKAKLFVPDAE+KRCI VSS TGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MC09g_new0087 vs. NCBI nr
Match: XP_022992479.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 862 bits (2228), Expect = 2.12e-314
Identity = 431/470 (91.70%), Postives = 450/470 (95.74%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV 302
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           S+EKAKLFVPDAE+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MC09g_new0087 vs. NCBI nr
Match: XP_038896546.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 861 bits (2225), Expect = 5.88e-314
Identity = 431/469 (91.90%), Postives = 450/469 (95.95%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62
           MATSSLPTKSLPPF P+S+  PSSPSTHFTKPLFLAPPDIS  +++ S  K  IP++KKN
Sbjct: 1   MATSSLPTKSLPPFSPTSSFSPSSPSTHFTKPLFLAPPDISLSTSSSSSSKLLIPSSKKN 60

Query: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122
            W DPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR
Sbjct: 61  QWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182
           GDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVMSGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242
           DPDDYFPEPAEYTDMVGLLK RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE 302
           GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKEVV 
Sbjct: 241 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA 300

Query: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362
           EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ +RGFKPVFVIPH
Sbjct: 301 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAVRGFKPVFVIPH 360

Query: 363 EKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422
           EKERENVEEEVGDDA I+FITTPGQLAALINDSAG+IATNTAA+QLAIAREKPSIALF S
Sbjct: 361 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGVIATNTAAVQLAIAREKPSIALFCS 420

Query: 423 DEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           +EKAKLFVPDAE+KRCITVSSATGRL DID+GTVK+AIQSFEVPLALAF
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSATGRLTDIDLGTVKKAIQSFEVPLALAF 469

[Close]

BLAST of MC09g_new0087 vs. ExPASy TrEMBL
Match: A0A6J1CV27 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014527 PE=4 SV=1)

HSP 1 Score: 936 bits (2419), Expect = 0.0
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 0


Query: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK 60
           MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK
Sbjct: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK 60

Query: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120
           KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK
Sbjct: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120

Query: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180
           LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN
Sbjct: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180

Query: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240
           VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN
Sbjct: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240

Query: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 300
           AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV
Sbjct: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 300

Query: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360
           VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI
Sbjct: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360

Query: 361 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420
           PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF
Sbjct: 361 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420

Query: 421 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of MC09g_new0087 vs. ExPASy TrEMBL
Match: A0A6J1GNJ2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456057 PE=4 SV=1)

HSP 1 Score: 865 bits (2236), Expect = 7.90e-316
Identity = 432/470 (91.91%), Postives = 452/470 (96.17%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV 302
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           S+EKAKLFVPD+E+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MC09g_new0087 vs. ExPASy TrEMBL
Match: A0A6J1JXN2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488799 PE=4 SV=1)

HSP 1 Score: 862 bits (2228), Expect = 1.03e-314
Identity = 431/470 (91.70%), Postives = 450/470 (95.74%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVV 302
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKV ISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+A I+FITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           S+EKAKLFVPDAE+KRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MC09g_new0087 vs. ExPASy TrEMBL
Match: A0A5A7UYW0 (Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001650 PE=4 SV=1)

HSP 1 Score: 852 bits (2200), Expect = 1.58e-310
Identity = 427/469 (91.04%), Postives = 450/469 (95.95%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  IP +KKN
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLIS-LSTSS---KLRIPCSKKN 60

Query: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122
           PWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR
Sbjct: 61  PWFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182
           GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242
           DPDDYFPEPAEYTDMVG+LK RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE 302
           GAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV I+RKLKEV+ 
Sbjct: 241 GAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIA 300

Query: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362
           EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIPH
Sbjct: 301 EKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPH 360

Query: 363 EKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422
           EKERENVEEEVG++A I+FITTPGQLAALINDSAGLIATNTAA+QLAIAREKPSIALF S
Sbjct: 361 EKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCS 420

Query: 423 DEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           +EKAKLFVPDAE+KRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAF 465

[Close]

BLAST of MC09g_new0087 vs. ExPASy TrEMBL
Match: A0A1S3CEK1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499839 PE=4 SV=1)

HSP 1 Score: 848 bits (2192), Expect = 2.61e-309
Identity = 426/469 (90.83%), Postives = 449/469 (95.74%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKN 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  IP +KKN
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLIS-LSTSS---KLRIPCSKKN 60

Query: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122
           PWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR
Sbjct: 61  PWFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182
           GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242
           DPDDYFPEPAEYTDMVG+LK RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVE 302
           GAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV I+RKLKEV+ 
Sbjct: 241 GAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIA 300

Query: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362
           EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIP 
Sbjct: 301 EKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPR 360

Query: 363 EKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422
           EKERENVEEEVG++A I+FITTPGQLAALINDSAGLIATNTAA+QLAIAREKPSIALF S
Sbjct: 361 EKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCS 420

Query: 423 DEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471
           +EKAKLFVPDAE+KRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAF 465

[Close]

BLAST of MC09g_new0087 vs. TAIR 10
Match: AT1G15980.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 653.7 bits (1685), Expect = 1.1e-187
Identity = 337/466 (72.32%), Postives = 383/466 (82.19%), Query Frame = 0


Query: 6   SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAKKNPW 65
           SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFL--NFQTRLTSRSSDVSVNLKKKNNPW 62

Query: 66  FDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRGD 125
            DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGD
Sbjct: 63  LDPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGD 122

Query: 126 VRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDP 185
           VRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDP
Sbjct: 123 VRRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDP 182

Query: 186 DDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGA 245
           DD++PEPAEYTDM+GLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGA
Sbjct: 183 DDHWPEPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGA 242

Query: 246 GLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEVVEEK 305
           GL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+V ISRK+KEVV  K
Sbjct: 243 GLMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAK 302

Query: 306 YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEK 365
           Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEK
Sbjct: 303 YRNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEK 362

Query: 366 ERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDE 425
           ERENVE+ VGDD  I+FITTPGQLAALINDSAG+IATNTAAIQLA AR+KP I LFSS+E
Sbjct: 363 ERENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEE 422

Query: 426 KAKLFVPDAESK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL 470
           K KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Sbjct: 423 KGKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

The following BLAST results are available for this feature:

BLAST of MC09g_new0087 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N6	1.6e-186	72.32	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of MC09g_new0087 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145001.1	0.0	100.00	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia...	[more]
XP_022953552.1	1.63e-315	91.91	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]	[more]
KAG6575629.1	1.63e-315	91.91	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita ...	[more]
XP_022992479.1	2.12e-314	91.70	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]	[more]
XP_038896546.1	5.88e-314	91.90	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]	[more]

BLAST of MC09g_new0087 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV27	0.0	100.00	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charant...	[more]
A0A6J1GNJ2	7.90e-316	91.91	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1JXN2	1.03e-314	91.70	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima ...	[more]
A0A5A7UYW0	1.58e-310	91.04	Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CEK1	2.61e-309	90.83	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3...	[more]

BLAST of MC09g_new0087 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15980.1	1.1e-187	72.32	NDH-dependent cyclic electron flow 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 300..465 e-value: 1.5E-10 score: 43.1
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 139..273 e-value: 3.0E-9 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..99
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 139..462
IPR044983	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic	PANTHER	PTHR37698	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	coord: 3..470

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC09g_new0087.1	MC09g_new0087.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016757	glycosyltransferase activity