MC09g0653 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0653
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein no-on-transient A-like
LocationMC09: 5937641 .. 5937967 (+)
RNA-Seq ExpressionMC09g0653
SyntenyMC09g0653
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGCTCTTGTTCTCTGAGCCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCGGATTGCAGATAACGGTGCTGAGTTCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGGCGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATCGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCT

mRNA sequence

CTGCTCTTGTTCTCTGAGCCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCGGATTGCAGATAACGGTGCTGAGTTCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGGCGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATCGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCT

Coding sequence (CDS)

CTGCTCTTGTTCTCTGAGCCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCGGATTGCAGATAACGGTGCTGAGTTCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGGCGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATCGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCT

Protein sequence

LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLCFS
Homology
BLAST of MC09g0653 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.8 bits (216), Expect = 7.24e-20
Identity = 55/106 (51.89%), Postives = 62/106 (58.49%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGIR 60
           LLLFSE L +SA      SNS TG LRRN+LQTA H+IADN  E S E K+NVHI++  R
Sbjct: 15  LLLFSESLTASAVDRSGDSNSLTGMLRRNVLQTAAHQIADNSVESSPERKMNVHIKR--R 74

Query: 61  ARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVL 106
            RP+                     G R SAANRSR AS GVGSVL
Sbjct: 75  MRPVAT-------------------GTRSSAANRSRIASIGVGSVL 99

BLAST of MC09g0653 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa])

HSP 1 Score: 83.2 bits (204), Expect = 5.16e-18
Identity = 56/111 (50.45%), Postives = 68/111 (61.26%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGI- 60
           LL FSE L++SAA    ASNS TG LRRN+LQTA H IAD      SEGK+NVHI++G  
Sbjct: 15  LLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIAD------SEGKMNVHIKRGGG 74

Query: 61  -RARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLCFS 109
            R RP+      T              G+RKSAA+RS+ ASFG+G +L FS
Sbjct: 75  GRIRPVAAGTGFT--------------GNRKSAASRSQVASFGLGFLLFFS 105

BLAST of MC09g0653 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 2.32e-16
Identity = 58/110 (52.73%), Postives = 64/110 (58.18%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGI- 60
           LL FSE L++SAA    ASNS T  LRRNILQTA H IAD      SEGK+NV I+KG  
Sbjct: 15  LLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIAD------SEGKMNVRIKKGGL 74

Query: 61  -RARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLCF 108
            R RPIG  G  T              G R SAANRSR  SFG+G +L F
Sbjct: 75  GRFRPIGA-GTGT--------------GTRSSAANRSRVDSFGLGFLLFF 103

BLAST of MC09g0653 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 68.9 bits (167), Expect = 1.85e-12
Identity = 49/108 (45.37%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQT-ADHRIADNGAEFSSEGKINVHIRKGI 60
           LLLF E L +SAA H  AS S  G LRRNI+QT ADH          +E K NVHI++ +
Sbjct: 15  LLLFFESLPTSAAVHRGASTSLAGILRRNIVQTTADHHQV-------AEKKFNVHIKRRM 74

Query: 61  RARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLC 107
           R RP+                  LI   + SAANRSR A  GVGS+LC
Sbjct: 75  RMRPV------------------LIGRPKTSAANRSREAFCGVGSMLC 97

BLAST of MC09g0653 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 61.6 bits (148), Expect = 6.43e-09
Identity = 44/110 (40.00%), Postives = 58/110 (52.73%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTAD-HRIADNGA--EFSSEGKINVHIRK 60
           LLL SE L  SAA HG A +   G  RR+ LQTA+ H++A+NG   ++S E KI    R+
Sbjct: 15  LLLLSEHLPISAADHGVAPSPLAGVFRRDTLQTAERHQVAENGIGYQYSFEQKIRRRARR 74

Query: 61  GIRARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLC 107
            +R            A  P P           S+AN SR +SFG+GS+LC
Sbjct: 75  AVRR-----------AEGPSP-----------SSANWSRTSSFGIGSLLC 102

BLAST of MC09g0653 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.50e-18
Identity = 56/111 (50.45%), Postives = 68/111 (61.26%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGI- 60
           LL FSE L++SAA    ASNS TG LRRN+LQTA H IAD      SEGK+NVHI++G  
Sbjct: 15  LLFFSESLSTSAADCRGASNSVTGMLRRNVLQTATHEIAD------SEGKMNVHIKRGGG 74

Query: 61  -RARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLCFS 109
            R RP+      T              G+RKSAA+RS+ ASFG+G +L FS
Sbjct: 75  GRIRPVAAGTGFT--------------GNRKSAASRSQVASFGLGFLLFFS 105

BLAST of MC09g0653 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.12e-16
Identity = 58/110 (52.73%), Postives = 64/110 (58.18%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKINVHIRKGI- 60
           LL FSE L++SAA    ASNS T  LRRNILQTA H IAD      SEGK+NV I+KG  
Sbjct: 15  LLFFSESLSTSAANCRGASNSVTAMLRRNILQTATHEIAD------SEGKMNVRIKKGGL 74

Query: 61  -RARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLCF 108
            R RPIG  G  T              G R SAANRSR  SFG+G +L F
Sbjct: 75  GRFRPIGA-GTGT--------------GTRSSAANRSRVDSFGLGFLLFF 103

BLAST of MC09g0653 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.52e-09
Identity = 46/108 (42.59%), Postives = 55/108 (50.93%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAEFSSEGKIN-VHIRKGI 60
           LL FSE L +S        +S TG   RNIL T  HRI +   E S + K N +H +   
Sbjct: 15  LLFFSESLLTS--------HSLTGIPHRNILHTVAHRIVNGSVESSYQRKSNKLHTKDRR 74

Query: 61  RARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLC 107
           R RPI I G     +N +         H KSA NRSR ASF VGS+LC
Sbjct: 75  RIRPILISG-----SNGM---------HHKSAENRSRVASFEVGSMLC 100

BLAST of MC09g0653 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.46e-07
Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTAD-HRIADNGA--EFSSEGKINVHIRK 60
           LLL  E L  SAA HG A +   G  R + LQTA+ H++A+NG   ++S E KI    R+
Sbjct: 77  LLLLFERLPISAADHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQYSFEQKIRRRARR 136

Query: 61  GIRARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLC 107
            +R            A  P P           S+AN SR +SFGVGS+LC
Sbjct: 137 AVRR-----------AEGPSP-----------SSANWSRTSSFGVGSLLC 164

BLAST of MC09g0653 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.52e-07
Identity = 43/110 (39.09%), Postives = 57/110 (51.82%), Query Frame = 0

Query: 1   LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTAD-HRIADNGA--EFSSEGKINVHIRK 60
           LLL SE L  SAA HG A +      RR+ LQTA+ H++A+NG   ++S E KI    R+
Sbjct: 104 LLLLSEHLPISAADHGVAPSPLARVFRRDTLQTAERHQVAENGIGYQYSFEQKIRRRARR 163

Query: 61  GIRARPIGIPGRRTPAANPIPVHPILIPGHRKSAANRSRAASFGVGSVLC 107
            +R            A  P P           S+AN S+ +SFGVGS+LC
Sbjct: 164 AVRR-----------AEGPSP-----------SSANWSQTSSFGVGSLLC 191

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6575859.17.24e-2051.89hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0068047.15.16e-1850.45protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no... [more]
KGN44886.12.32e-1652.73hypothetical protein Csa_015765 [Cucumis sativus][more]
KAG6593163.11.85e-1245.37hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6575858.16.43e-0940.00hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5A7VLE52.50e-1850.45Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0KAQ71.12e-1652.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1[more]
A0A5D3D3Y65.52e-0942.59E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A6J1JZB11.46e-0739.09uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GRX21.52e-0739.09uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0653.1MC09g0653.1mRNA