MC09g0580 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0580
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDUF4283 domain-containing protein
LocationMC09: 5265734 .. 5265913 (-)
RNA-Seq ExpressionMC09g0580
SyntenyMC09g0580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTACACACCACTTTGAAAACCCTCGTCGCCACCAGCAGATACAACAGATTTTCTCAAGAGAAAAGATGTGATGAGTATTTCTTTTGGATTGAAAAGACCACGAACAAAAGAGGATTTATTGCTGAAATTTATCGCATTTATGAAAAGGGTCGTGATTGCTGCATCATGATCCCTAAGGGA

mRNA sequence

CTACACACCACTTTGAAAACCCTCGTCGCCACCAGCAGATACAACAGATTTTCTCAAGAGAAAAGATGTGATGAGTATTTCTTTTGGATTGAAAAGACCACGAACAAAAGAGGATTTATTGCTGAAATTTATCGCATTTATGAAAAGGGTCGTGATTGCTGCATCATGATCCCTAAGGGA

Coding sequence (CDS)

CTACACACCACTTTGAAAACCCTCGTCGCCACCAGCAGATACAACAGATTTTCTCAAGAGAAAAGATGTGATGAGTATTTCTTTTGGATTGAAAAGACCACGAACAAAAGAGGATTTATTGCTGAAATTTATCGCATTTATGAAAAGGGTCGTGATTGCTGCATCATGATCCCTAAGGGA

Protein sequence

LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG
Homology
[Close]
BLAST of MC09g0580 vs. NCBI nr
Match: KAA0067710.1 (hypothetical protein E6C27_scaffold352G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 4.73e-15
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 1  LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
          L +T KTL+ T R  RF  +KR +EY  W++KT N++G+IAEIYR+ ++GR CCI++P+G
Sbjct: 24 LKSTFKTLLDTPRTTRFFLKKRFEEYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 83

[Close]
BLAST of MC09g0580 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 75.9 bits (185), Expect = 3.81e-14
Identity = 29/60 (48.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L ++ +TL+ T R  RF  EKR ++Y  W++KT N++G+IAEIYR+ ++GR CCI++P+G
Sbjct: 144 LKSSFRTLLDTPRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 203

[Close]
BLAST of MC09g0580 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 5.18e-14
Identity = 29/60 (48.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L ++ +TL+ T R  RF  EKR ++Y  W++KT N++G+IAEIYR+ ++GR CCI++P+G
Sbjct: 92  LKSSFRTLLDTLRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 151

[Close]
BLAST of MC09g0580 vs. NCBI nr
Match: TYK18363.1 (hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.61e-13
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L TT K L+ T R  RF  EKR  ++  W++K  N+RG+IAEIYR+ ++GR CCI++P+G
Sbjct: 54  LKTTFKALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEG 113

[Close]
BLAST of MC09g0580 vs. NCBI nr
Match: KAA0063662.1 (hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 2.06e-13
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L TT K L+ T R  RF  EKR  ++  W++K  N+RG+IAEIYR+ ++GR CCI++P+G
Sbjct: 54  LKTTFKALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEG 113

[Close]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match: A0A5A7VKI3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00160 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.29e-15
Identity = 31/60 (51.67%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 1  LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
          L +T KTL+ T R  RF  +KR +EY  W++KT N++G+IAEIYR+ ++GR CCI++P+G
Sbjct: 24 LKSTFKTLLDTPRTTRFFLKKRFEEYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 83

[Close]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.85e-14
Identity = 29/60 (48.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L ++ +TL+ T R  RF  EKR ++Y  W++KT N++G+IAEIYR+ ++GR CCI++P+G
Sbjct: 144 LKSSFRTLLDTPRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 203

[Close]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.51e-14
Identity = 29/60 (48.33%), Postives = 46/60 (76.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L ++ +TL+ T R  RF  EKR ++Y  W++KT N++G+IAEIYR+ ++GR CCI++P+G
Sbjct: 92  LKSSFRTLLDTLRTTRFFLEKRFEDYCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEG 151

[Close]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match: A0A5D3D494 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00820 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.79e-14
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L TT K L+ T R  RF  EKR  ++  W++K  N+RG+IAEIYR+ ++GR CCI++P+G
Sbjct: 54  LKTTFKALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEG 113

[Close]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match: A0A5A7V5Z9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001780 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.99e-14
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0 

Query: 1   LHTTLKTLVATSRYNRFSQEKRCDEYFFWIEKTTNKRGFIAEIYRIYEKGRDCCIMIPKG 60
           L TT K L+ T R  RF  EKR  ++  W++K  N+RG+IAEIYR+ ++GR CCI++P+G
Sbjct: 54  LKTTFKALLNTPRTTRFFVEKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEG 113

The following BLAST results are available for this feature:
BLAST of MC09g0580 vs.
Match NameE-valueIdentityDescription
BLAST of MC09g0580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0067710.14.73e-1551.67hypothetical protein E6C27_scaffold352G00160 [Cucumis melo var. makuwa][more]
TYK10355.13.81e-1448.33hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa][more]
KAA0050054.15.18e-1448.33hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa][more]
TYK18363.11.61e-1350.00hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa][more]
KAA0063662.12.06e-1350.00hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa][more]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VKI32.29e-1551.67DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3CFS81.85e-1448.33DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7U4952.51e-1448.33DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3D4947.79e-1450.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V5Z99.99e-1450.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MC09g0580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0580.1MC09g0580.1mRNA