MC09g0355 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC09g0355
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransmembrane protein, putative
LocationMC09: 3101260 .. 3101400 (+)
RNA-Seq ExpressionMC09g0355
SyntenyMC09g0355
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAATAGACCCAATAAGGGCTCTCGATTTAGACGA

mRNA sequence

ACAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAATAGACCCAATAAGGGCTCTCGATTTAGACGA

Coding sequence (CDS)

ACAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAATAGACCCAATAAGGGCTCTCGATTTAGACGA

Protein sequence

TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
Homology
BLAST of MC09g0355 vs. NCBI nr
Match: XP_022145821.1 (uncharacterized protein LOC111015178 [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 5.38e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
Sbjct: 78  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 123

BLAST of MC09g0355 vs. NCBI nr
Match: KAG6593392.1 (hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025739.1 hypothetical protein SDJN02_12237, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.0 bits (227), Expect = 2.56e-22
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 86  GFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 131

BLAST of MC09g0355 vs. NCBI nr
Match: XP_022959617.1 (uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata])

HSP 1 Score: 92.0 bits (227), Expect = 2.56e-22
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 86  GFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 131

BLAST of MC09g0355 vs. NCBI nr
Match: XP_023004358.1 (uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima])

HSP 1 Score: 92.0 bits (227), Expect = 2.56e-22
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 86  GFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 131

BLAST of MC09g0355 vs. NCBI nr
Match: XP_008461116.1 (PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo])

HSP 1 Score: 90.9 bits (224), Expect = 6.23e-22
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0

Query: 1   TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           TG PA FSKF+DRVQIF AVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 79  TGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGKNRPNKGSRFRR 125

BLAST of MC09g0355 vs. ExPASy TrEMBL
Match: A0A6J1CXJ1 (uncharacterized protein LOC111015178 OS=Momordica charantia OX=3673 GN=LOC111015178 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.61e-25
Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
Sbjct: 78  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 123

BLAST of MC09g0355 vs. ExPASy TrEMBL
Match: A0A6J1KZ93 (uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497700 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.24e-22
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 86  GFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 131

BLAST of MC09g0355 vs. ExPASy TrEMBL
Match: A0A6J1H516 (uncharacterized protein LOC111460643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460643 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.24e-22
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 86  GFPAIFSKFGDRVQIFFAVLFWMSLFFWTSALDGKNRPNKGSRFRR 131

BLAST of MC09g0355 vs. ExPASy TrEMBL
Match: A0A1S3CE06 (uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.01e-22
Identity = 42/47 (89.36%), Postives = 43/47 (91.49%), Query Frame = 0

Query: 1   TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           TG PA FSKF+DRVQIF AVLFWMSLFFWTS LDGKNRPNKGSRFRR
Sbjct: 79  TGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGKNRPNKGSRFRR 125

BLAST of MC09g0355 vs. ExPASy TrEMBL
Match: A0A0A0K8T0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.08e-22
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0

Query: 1   TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR 47
           TG PA FSKF+DRVQIF AVLFWMSLFFWTS LDG+NRPNKGSRFRR
Sbjct: 81  TGLPAIFSKFRDRVQIFLAVLFWMSLFFWTSALDGRNRPNKGSRFRR 127

BLAST of MC09g0355 vs. TAIR 10
Match: AT3G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52550.1); Has 20 Blast hits to 20 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.5e-07
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0

Query: 2   GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLD--GKNRPNKGSRFR 47
           G     ++ QDRV+IF AV FWM LFFW +V D  GK +  KGSRF+
Sbjct: 71  GLVGAVTRVQDRVKIFLAVFFWMFLFFWVTVTDGTGKGKGKKGSRFK 117

BLAST of MC09g0355 vs. TAIR 10
Match: AT1G52550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast hits to 51 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 1.7e-06
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0

Query: 8   SKFQDRVQIFFAVLFWMSLFFWTSVLDGK-----NRPNKGSRFR 47
           S  QDRV+IF +VL W+SLFFW S L G+      +  KGSRF+
Sbjct: 88  SMIQDRVKIFLSVLIWISLFFWASALQGRGSKGNGKGKKGSRFK 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022145821.15.38e-25100.00uncharacterized protein LOC111015178 [Momordica charantia][more]
KAG6593392.12.56e-2293.48hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022959617.12.56e-2293.48uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata][more]
XP_023004358.12.56e-2293.48uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima][more]
XP_008461116.16.23e-2289.36PREDICTED: uncharacterized protein LOC103499798 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1CXJ12.61e-25100.00uncharacterized protein LOC111015178 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1KZ931.24e-2293.48uncharacterized protein LOC111497700 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1H5161.24e-2293.48uncharacterized protein LOC111460643 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3CE063.01e-2289.36uncharacterized protein LOC103499798 OS=Cucumis melo OX=3656 GN=LOC103499798 PE=... [more]
A0A0A0K8T09.08e-2287.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G15780.11.5e-0753.19unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G52550.11.7e-0652.27unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37706TRANSMEMBRANE PROTEINcoord: 2..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC09g0355.1MC09g0355.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane