MC09g0336 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CAGTGTATCACATTTCACATTTGCCTTTACTCATTCATACTTTCTCTTCTCTAGTTTTTCAACAAAAAATACAAATCACTCAAAATGGCAGGCCGTCAGGAAATCAGCCACAAGGCCGGTGAGGTCGTTGGCCAAGCTCAGGTACAACAAAATCGTTATCAAACACAACATTATATAGATGTATATTTATTTACTTGTTATTTTTGTTTCGATTTTTAGATGAAGAAGGATGAGGTCTTGAACCAAGCGTCCCACGACAACGCTTCATCTACGCATGATCAATCTGCCCAAAATGCCTCTGATCTTAAGGGCCAAGCTGCAAATTTCCTCCAACAGGTTAACGTCTCTAAAATGTATTTCAAATCTATATCTAATGAAGAGCACGACATCTTTTTAACCGAGCGGTTGGTTTTTTTTTGGTGTAGACTGGAGAGCAAGTGAAGAACATGGCACAGGGAGCGGCTGAGGCTGTGAAGAACACACTTGGGATGAACACAGATAGCCCAAACAGCCCAAGCAACAACCCTTCCAACACAAACACAGCCAGCACCAACAGTCCTTCCAACACAAACACAGCCAGCACCAACCACCCTTCCAATCCATCCACTAGAATTTGAAGAGAAAAAAAATGAAGAATTAATTACTTCATTTTTCAAATAATTTCTACTCATTTAAGTTTCTTTTTATTTTTGGTTTTTTTTTATTTGCTTCTTTCATATTGCAAGAGTAATGAGTGTGCAAATGAAAGATGGATTATTTATGTATAATAATTAAAGGAAGAGTGTGATGTATGGATCCCCTTCCTTTTTCATAATTGAATTTCAAGTTTTGTTTGACTA CAGTGTATCACATTTCACATTTGCCTTTACTCATTCATACTTTCTCTTCTCTAGTTTTTCAACAAAAAATACAAATCACTCAAAATGGCAGGCCGTCAGGAAATCAGCCACAAGGCCGGTGAGGTCGTTGGCCAAGCTCAGATGAAGAAGGATGAGGTCTTGAACCAAGCGTCCCACGACAACGCTTCATCTACGCATGATCAATCTGCCCAAAATGCCTCTGATCTTAAGGGCCAAGCTGCAAATTTCCTCCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAGGGAGCGGCTGAGGCTGTGAAGAACACACTTGGGATGAACACAGATAGCCCAAACAGCCCAAGCAACAACCCTTCCAACACAAACACAGCCAGCACCAACAGTCCTTCCAACACAAACACAGCCAGCACCAACCACCCTTCCAATCCATCCACTAGAATTTGAAGAGAAAAAAAATGAAGAATTAATTACTTCATTTTTCAAATAATTTCTACTCATTTAAGTTTCTTTTTATTTTTGGTTTTTTTTTATTTGCTTCTTTCATATTGCAAGAGTAATGAGTGTGCAAATGAAAGATGGATTATTTATGTATAATAATTAAAGGAAGAGTGTGATGTATGGATCCCCTTCCTTTTTCATAATTGAATTTCAAGTTTTGTTTGACTA ATGGCAGGCCGTCAGGAAATCAGCCACAAGGCCGGTGAGGTCGTTGGCCAAGCTCAGATGAAGAAGGATGAGGTCTTGAACCAAGCGTCCCACGACAACGCTTCATCTACGCATGATCAATCTGCCCAAAATGCCTCTGATCTTAAGGGCCAAGCTGCAAATTTCCTCCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAGGGAGCGGCTGAGGCTGTGAAGAACACACTTGGGATGAACACAGATAGCCCAAACAGCCCAAGCAACAACCCTTCCAACACAAACACAGCCAGCACCAACAGTCCTTCCAACACAAACACAGCCAGCACCAACCACCCTTCCAATCCATCCACTAGAATTTGA MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTASTNSPSNTNTASTNHPSNPSTRI Homology
BLAST of MC09g0336 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04 Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 0
BLAST of MC09g0336 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.0e-04 Identity = 33/79 (41.77%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of MC09g0336 vs. NCBI nr
Match: XP_022151737.1 (late embryogenesis abundant protein 7 [Momordica charantia]) HSP 1 Score: 214 bits (545), Expect = 1.52e-69 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MC09g0336 vs. NCBI nr
Match: XP_038899752.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 124 bits (310), Expect = 6.58e-34 Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0
BLAST of MC09g0336 vs. NCBI nr
Match: KAF3946752.1 (hypothetical protein CMV_027014 [Castanea mollissima]) HSP 1 Score: 124 bits (311), Expect = 7.04e-34 Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = 0
BLAST of MC09g0336 vs. NCBI nr
Match: XP_030973120.1 (uncharacterized protein LOC115992998 [Quercus lobata]) HSP 1 Score: 119 bits (297), Expect = 9.42e-32 Identity = 86/129 (66.67%), Postives = 100/129 (77.52%), Query Frame = 0
BLAST of MC09g0336 vs. NCBI nr
Match: XP_023000409.1 (late embryogenesis abundant protein 1 [Cucurbita maxima]) HSP 1 Score: 117 bits (293), Expect = 2.68e-31 Identity = 75/106 (70.75%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of MC09g0336 vs. ExPASy TrEMBL
Match: A0A6J1DEA7 (late embryogenesis abundant protein 7 OS=Momordica charantia OX=3673 GN=LOC111019645 PE=4 SV=1) HSP 1 Score: 214 bits (545), Expect = 7.37e-70 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of MC09g0336 vs. ExPASy TrEMBL
Match: A0A6J1KJU5 (late embryogenesis abundant protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494669 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 1.30e-31 Identity = 75/106 (70.75%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of MC09g0336 vs. ExPASy TrEMBL
Match: A0A1S3CF46 (late embryogenesis abundant protein 1 OS=Cucumis melo OX=3656 GN=LOC103499779 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 2.20e-31 Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 0
BLAST of MC09g0336 vs. ExPASy TrEMBL
Match: A0A6J1HHY8 (late embryogenesis abundant protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464504 PE=4 SV=1) HSP 1 Score: 115 bits (289), Expect = 5.26e-31 Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MC09g0336 vs. ExPASy TrEMBL
Match: A0A5D3CF20 (Late embryogenesis abundant protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002210 PE=4 SV=1) HSP 1 Score: 113 bits (283), Expect = 4.05e-30 Identity = 81/124 (65.32%), Postives = 92/124 (74.19%), Query Frame = 0
BLAST of MC09g0336 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 79.0 bits (193), Expect = 3.0e-15 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 0
BLAST of MC09g0336 vs. TAIR 10
Match: AT1G15415.1 (The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol. ) HSP 1 Score: 44.3 bits (103), Expect = 8.2e-05 Identity = 41/117 (35.04%), Postives = 60/117 (51.28%), Query Frame = 0
BLAST of MC09g0336 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of MC09g0336 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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