MC08g1409 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC08g1409
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Enzymatic polyprotein
Location	MC08: 15400600 .. 15401016 (+)
RNA-Seq Expression	MC08g1409
Synteny	MC08g1409

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAGAGCTTGCAAAAAACGAAGCCCTTGTAGAGACGCTCAAAGCCCAAGGACAGGTGGCGGTCATCAGAAACGACACTGTTTGGGTCACTGCAAGGGGTAAAGAAATAGCTTCCACCTTCCCTCCTGAAGAAGAAGCTACCTTCTCTAACCCAGTCATATCGGCCATAAAAATGGTGTATTTTCCCTATAAGACAATAGATGATGACAAAGTCCAGAAAGTTGGTGTTCGTGAAATAAAAAACATCCAACATCAACTCAATTACTCGAACAAGATTCTTTATGAAGTTTCTAAAGCTGTTCAAAGAATTGAGAACCCGGTTCCTCCCATCATCTCGGAGAACCCAGAGATCCCACAAGCGGACCCCTACCAGCCTATTTTTCAACCTAACAGTTTCAAGATTGGAACTCTCAAG

mRNA sequence

AAAAGAGAGCTTGCAAAAAACGAAGCCCTTGTAGAGACGCTCAAAGCCCAAGGACAGGTGGCGGTCATCAGAAACGACACTGTTTGGGTCACTGCAAGGGGTAAAGAAATAGCTTCCACCTTCCCTCCTGAAGAAGAAGCTACCTTCTCTAACCCAGTCATATCGGCCATAAAAATGGTGTATTTTCCCTATAAGACAATAGATGATGACAAAGTCCAGAAAGTTGGTGTTCGTGAAATAAAAAACATCCAACATCAACTCAATTACTCGAACAAGATTCTTTATGAAGTTTCTAAAGCTGTTCAAAGAATTGAGAACCCGGTTCCTCCCATCATCTCGGAGAACCCAGAGATCCCACAAGCGGACCCCTACCAGCCTATTTTTCAACCTAACAGTTTCAAGATTGGAACTCTCAAG

Coding sequence (CDS)

AAAAGAGAGCTTGCAAAAAACGAAGCCCTTGTAGAGACGCTCAAAGCCCAAGGACAGGTGGCGGTCATCAGAAACGACACTGTTTGGGTCACTGCAAGGGGTAAAGAAATAGCTTCCACCTTCCCTCCTGAAGAAGAAGCTACCTTCTCTAACCCAGTCATATCGGCCATAAAAATGGTGTATTTTCCCTATAAGACAATAGATGATGACAAAGTCCAGAAAGTTGGTGTTCGTGAAATAAAAAACATCCAACATCAACTCAATTACTCGAACAAGATTCTTTATGAAGTTTCTAAAGCTGTTCAAAGAATTGAGAACCCGGTTCCTCCCATCATCTCGGAGAACCCAGAGATCCCACAAGCGGACCCCTACCAGCCTATTTTTCAACCTAACAGTTTCAAGATTGGAACTCTCAAG

Protein sequence

KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMVYFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQADPYQPIFQPNSFKIGTLK

Homology

[Close]

BLAST of MC08g1409 vs. NCBI nr
Match: KAA0032920.1 (movement protein [Cucumis melo var. makuwa])

HSP 1 Score: 195 bits (496), Expect = 7.48e-56
Identity = 98/139 (70.50%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEALV+ L+A GQ+A+I+  TVWVTA GKE+AS +PPEEEA F +P I AIKM+
Sbjct: 418 KLERAKNEALVKKLQADGQIAMIKGSTVWVTASGKEVASNYPPEEEAYFPHPAIPAIKMI 477

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN +NKIL  VSKAV+RIENP  P+ ++NPEIPQ
Sbjct: 478 SCPYKTINEDKVQKVGVREIKNIQHQLNITNKILSTVSKAVERIENPGLPLKNKNPEIPQ 537

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG LK
Sbjct: 538 INPNQPIFQPNSFNIGKLK 556

[Close]

BLAST of MC08g1409 vs. NCBI nr
Match: KAA0037876.1 (zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 2.14e-55
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEAL + L+A GQVA+I+  TVWVTA GKE+AS +PPEEEA FS+P I AIKMV
Sbjct: 231 KVERAKNEALAKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMV 290

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN++NK L  VSKAV+R+EN  PP+  +NPEIPQ
Sbjct: 291 SSPYKTINEDKVQKVGVREIKNIQHQLNFANKTLSTVSKAVERMENSRPPLKGKNPEIPQ 350

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG+L+
Sbjct: 351 INPNQPIFQPNSFNIGSLR 369

[Close]

BLAST of MC08g1409 vs. NCBI nr
Match: TYK28080.1 (movement protein [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (492), Expect = 2.82e-55
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEALV+ L+A GQ+A+I+  TVWVTA GKE+AS +PPEEEA F +P I AIKM+
Sbjct: 418 KLERAKNEALVKKLQADGQIAMIKGSTVWVTASGKEVASNYPPEEEAYFPHPAIPAIKMI 477

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN +NKIL  VSKAV+RIENP  P+ ++NP+IPQ
Sbjct: 478 SCPYKTINEDKVQKVGVREIKNIQHQLNITNKILSTVSKAVERIENPGLPLKNKNPKIPQ 537

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG LK
Sbjct: 538 INPNQPIFQPNSFNIGKLK 556

[Close]

BLAST of MC08g1409 vs. NCBI nr
Match: KAA0068170.1 (hypothetical protein E6C27_scaffold238G001390 [Cucumis melo var. makuwa] >TYK21090.1 hypothetical protein E5676_scaffold392G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (478), Expect = 3.55e-55
Identity = 96/139 (69.06%), Postives = 113/139 (81.29%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEALV+ L+A GQVA+I+  TVWVTA GKE+AS +PPEEEA FS+P I AIKMV
Sbjct: 110 KVERAKNEALVKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMV 169

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKV VREIKNIQHQLN++NK L  VSK V+R+EN  PP+  +N EIPQ
Sbjct: 170 SSPYKTINEDKVQKVEVREIKNIQHQLNFANKTLSTVSKPVERMENSGPPLKGKNLEIPQ 229

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG+LK
Sbjct: 230 INPNQPIFQPNSFNIGSLK 248

[Close]

BLAST of MC08g1409 vs. NCBI nr
Match: TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 194 bits (494), Expect = 2.01e-54
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEAL + L+A GQVA+I+  TVWVTA GKE+AS +PPEEEA FS+P I AIKMV
Sbjct: 419 KVERAKNEALAKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMV 478

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN++NK L  VSKAV+R+EN  PP+  +NPEIPQ
Sbjct: 479 SSPYKTINEDKVQKVGVREIKNIQHQLNFANKTLSTVSKAVERMENSRPPLKGKNPEIPQ 538

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG+L+
Sbjct: 539 INPNQPIFQPNSFNIGSLR 557

[Close]

BLAST of MC08g1409 vs. ExPASy TrEMBL
Match: A0A5A7SPT5 (Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001690 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 3.62e-56
Identity = 98/139 (70.50%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEALV+ L+A GQ+A+I+  TVWVTA GKE+AS +PPEEEA F +P I AIKM+
Sbjct: 418 KLERAKNEALVKKLQADGQIAMIKGSTVWVTASGKEVASNYPPEEEAYFPHPAIPAIKMI 477

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN +NKIL  VSKAV+RIENP  P+ ++NPEIPQ
Sbjct: 478 SCPYKTINEDKVQKVGVREIKNIQHQLNITNKILSTVSKAVERIENPGLPLKNKNPEIPQ 537

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG LK
Sbjct: 538 INPNQPIFQPNSFNIGKLK 556

[Close]

BLAST of MC08g1409 vs. ExPASy TrEMBL
Match: A0A5A7T6R6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00430 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 1.04e-55
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEAL + L+A GQVA+I+  TVWVTA GKE+AS +PPEEEA FS+P I AIKMV
Sbjct: 231 KVERAKNEALAKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMV 290

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN++NK L  VSKAV+R+EN  PP+  +NPEIPQ
Sbjct: 291 SSPYKTINEDKVQKVGVREIKNIQHQLNFANKTLSTVSKAVERMENSRPPLKGKNPEIPQ 350

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG+L+
Sbjct: 351 INPNQPIFQPNSFNIGSLR 369

[Close]

BLAST of MC08g1409 vs. ExPASy TrEMBL
Match: A0A5D3DXV6 (Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003440 PE=4 SV=1)

HSP 1 Score: 194 bits (492), Expect = 1.37e-55
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEALV+ L+A GQ+A+I+  TVWVTA GKE+AS +PPEEEA F +P I AIKM+
Sbjct: 418 KLERAKNEALVKKLQADGQIAMIKGSTVWVTASGKEVASNYPPEEEAYFPHPAIPAIKMI 477

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN +NKIL  VSKAV+RIENP  P+ ++NP+IPQ
Sbjct: 478 SCPYKTINEDKVQKVGVREIKNIQHQLNITNKILSTVSKAVERIENPGLPLKNKNPKIPQ 537

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG LK
Sbjct: 538 INPNQPIFQPNSFNIGKLK 556

[Close]

BLAST of MC08g1409 vs. ExPASy TrEMBL
Match: A0A5D3DC89 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00560 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.72e-55
Identity = 96/139 (69.06%), Postives = 113/139 (81.29%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEALV+ L+A GQVA+I+  TVWVTA GKE+AS +PPEEEA FS+P I AIKMV
Sbjct: 110 KVERAKNEALVKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMV 169

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKV VREIKNIQHQLN++NK L  VSK V+R+EN  PP+  +N EIPQ
Sbjct: 170 SSPYKTINEDKVQKVEVREIKNIQHQLNFANKTLSTVSKPVERMENSGPPLKGKNLEIPQ 229

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG+LK
Sbjct: 230 INPNQPIFQPNSFNIGSLK 248

[Close]

BLAST of MC08g1409 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 9.75e-55
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 0


Query: 1   KRELAKNEALVETLKAQGQVAVIRNDTVWVTARGKEIASTFPPEEEATFSNPVISAIKMV 60
           K E AKNEAL + L+A GQVA+I+  TVWVTA GKE+AS +PPEEEA FS+P I AIKMV
Sbjct: 419 KVERAKNEALAKKLQADGQVAMIKGSTVWVTASGKEVASNYPPEEEAYFSHPTIPAIKMV 478

Query: 61  YFPYKTIDDDKVQKVGVREIKNIQHQLNYSNKILYEVSKAVQRIENPVPPIISENPEIPQ 120
             PYKTI++DKVQKVGVREIKNIQHQLN++NK L  VSKAV+R+EN  PP+  +NPEIPQ
Sbjct: 479 SSPYKTINEDKVQKVGVREIKNIQHQLNFANKTLSTVSKAVERMENSRPPLKGKNPEIPQ 538

Query: 121 ADPYQPIFQPNSFKIGTLK 139
            +P QPIFQPNSF IG+L+
Sbjct: 539 INPNQPIFQPNSFNIGSLR 557

The following BLAST results are available for this feature:

BLAST of MC08g1409 vs.


Match Name	E-value	Identity	Description

BLAST of MC08g1409 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032920.1	7.48e-56	70.50	movement protein [Cucumis melo var. makuwa]	[more]
KAA0037876.1	2.14e-55	69.78	zf-CCHC domain-containing protein/MP domain-containing protein [Cucumis melo var...	[more]
TYK28080.1	2.82e-55	69.78	movement protein [Cucumis melo var. makuwa]	[more]
KAA0068170.1	3.55e-55	69.06	hypothetical protein E6C27_scaffold238G001390 [Cucumis melo var. makuwa] >TYK210...	[more]
TYJ97599.1	2.01e-54	69.78	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MC08g1409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPT5	3.62e-56	70.50	Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G0016...	[more]
A0A5A7T6R6	1.04e-55	69.78	Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v...	[more]
A0A5D3DXV6	1.37e-55	69.78	Movement protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003...	[more]
A0A5D3DC89	1.72e-55	69.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BEY3	9.75e-55	69.78	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69...	[more]

BLAST of MC08g1409 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC08g1409.1	MC08g1409.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding