MC07g_new0209 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g_new0209
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Homeobox-leucine zipper protein ANTHOCYANINLESS 2
Location	MC07: 6925709 .. 6926734 (+)
RNA-Seq Expression	MC07g_new0209
Synteny	MC07g_new0209

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTACTGAGCGAATCGACTACACAGAACAATCAAGCCCGAATTCCCCTGGATGGAAGGGAAGAATGTGGACAGATGGAACCAAAGAGGAGCTCTCCCTGCTTAGCGCAGGCTACATTGGACCCCTAGATCATGAAGAAGGTGTCCCCTACACCGGACCGGAATCTCCATCCCGATTGGGAACCACAAAAGTGATTATCAATGGCTGGTTGAGCTCAAGCTCTTGCTTCTTGGTCACCACAGAAGCAGAACCAAAGCGAGCAGGGCCCACACCTTAGTTGTTCTATACCTTGCAGGAGAAGGGTTCAAGTACCCATTCGGGGATTAAGTGGAATATTAGCCCGGAAATGCGACTCTAACAGCTAGGTTTCGAGAGGGCTATATCGATCTCGGAAACAGGGGAAGAAAGGGAGGAAGGAATGAGATTCTTTATAGCCCTTTCCAGACCTTATGTAATTTCCTTCGGTTGGGTTAGCTTTTTGGTAGGAAAGGCGGTAGTAGAGTTGCGTCAGGTCCTTCGCCTGACTCTACTCTTTGTTTTCCAGGCAGGGATGCCCATTGTTCCCTGCTCTAACTCCTCCGATTTCCCTTTGCTTTCTTTATTACTTATCGCACGTGCCCAGTCTCAACGTCACTTCCCAAACCAAAACAGCCTTTCCCAGATCTATGAAAGGTGAAACGTTGAAGGTCCACAACAGGTAACATAAATGAACAAGTTTATTTTGTATTCGAGCTGCTGAGGGCCGGAGCTCGTATGGATACATTACTTCATTGTTCTATGTTCTATGAGGCCTTGCACTAAGCACATACTCGGAGAGGGTCGCGAAGTGTAAAGATCCGGTCTTTGACAACCGTCGTAAGAACAACAAAATCGATTGTGTCTTCGACACTATAACTATAGGCGGGACCTGTTGTAGGATGATCGCCGAGTGGCGTTCTGCTCGATTAGGCGAATGCGAGTGAGGGATAAGCTTTCCCCGTTCGCTAGGAGGGAAACTCGGGAAGAGTTCAGGCAGAAATAG

mRNA sequence

ATGGAGGGTACTGAGCGAATCGACTACACAGAACAATCAAGCCCGAATTCCCCTGGATGGAAGGGAAGAATGTGGACAGATGGAACCAAAGAGGAGCTCTCCCTGCTTAGCGCAGGCTACATTGGACCCCTAGATCATGAAGAAGGTGTCCCCTACACCGGACCGGAATCTCCATCCCGATTGGGAACCACAAAAGTGATTATCAATGGCTGGTTGAGCTCAAGCTCTTGCTTCTTGGATGATCGCCGAGTGGCGTTCTGCTCGATTAGGCGAATGCGAGTGAGGGATAAGCTTTCCCCGTTCGCTAGGAGGGAAACTCGGGAAGAGTTCAGGCAGAAATAG

Coding sequence (CDS)

ATGGAGGGTACTGAGCGAATCGACTACACAGAACAATCAAGCCCGAATTCCCCTGGATGGAAGGGAAGAATGTGGACAGATGGAACCAAAGAGGAGCTCTCCCTGCTTAGCGCAGGCTACATTGGACCCCTAGATCATGAAGAAGGTGTCCCCTACACCGGACCGGAATCTCCATCCCGATTGGGAACCACAAAAGTGATTATCAATGGCTGGTTGAGCTCAAGCTCTTGCTTCTTGGATGATCGCCGAGTGGCGTTCTGCTCGATTAGGCGAATGCGAGTGAGGGATAAGCTTTCCCCGTTCGCTAGGAGGGAAACTCGGGAAGAGTTCAGGCAGAAATAG

Protein sequence

MEGTERIDYTEQSSPNSPGWKGRMWTDGTKEELSLLSAGYIGPLDHEEGVPYTGPESPSRLGTTKVIINGWLSSSSCFLDDRRVAFCSIRRMRVRDKLSPFARRETREEFRQK

Homology

[Close]

BLAST of MC07g_new0209 vs. NCBI nr
Match: KAB1225123.1 (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Morella rubra])

HSP 1 Score: 67.0 bits (162), Expect = 9.84e-12
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 3  GTERIDYTEQSSPNSPGWKGRMWTDGTK 30
          GTERIDYTEQSSPNSPGWKGRMWTDGTK
Sbjct: 70 GTERIDYTEQSSPNSPGWKGRMWTDGTK 97

[Close]

BLAST of MC07g_new0209 vs. NCBI nr
Match: GFZ18031.1 (hypothetical protein Acr_26g0013000 [Actinidia rufa])

HSP 1 Score: 55.5 bits (132), Expect = 3.87e-06
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0


Query: 55  PESPSRLGTTKVIINGWLSSSSCFL 79
           PESPSRLGTTKVIINGWLSSSSCFL
Sbjct: 151 PESPSRLGTTKVIINGWLSSSSCFL 175

[Close]

BLAST of MC07g_new0209 vs. ExPASy TrEMBL
Match: A0A6A1WK03 (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Morella rubra OX=262757 GN=CJ030_MR1G018000 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.76e-12
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0


Query: 3  GTERIDYTEQSSPNSPGWKGRMWTDGTK 30
          GTERIDYTEQSSPNSPGWKGRMWTDGTK
Sbjct: 70 GTERIDYTEQSSPNSPGWKGRMWTDGTK 97

[Close]

BLAST of MC07g_new0209 vs. ExPASy TrEMBL
Match: A0A7J0H4S6 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0013000 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.87e-06
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0


Query: 55  PESPSRLGTTKVIINGWLSSSSCFL 79
           PESPSRLGTTKVIINGWLSSSSCFL
Sbjct: 151 PESPSRLGTTKVIINGWLSSSSCFL 175

The following BLAST results are available for this feature:

BLAST of MC07g_new0209 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g_new0209 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB1225123.1	9.84e-12	100.00	Homeobox-leucine zipper protein ANTHOCYANINLESS 2 [Morella rubra]	[more]
GFZ18031.1	3.87e-06	100.00	hypothetical protein Acr_26g0013000 [Actinidia rufa]	[more]

BLAST of MC07g_new0209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1WK03	4.76e-12	100.00	Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Morella rubra OX=262757 GN=...	[more]
A0A7J0H4S6	1.87e-06	100.00	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0013000 PE=4 SV=1	[more]

BLAST of MC07g_new0209 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g_new0209.1	MC07g_new0209.1	mRNA