MC07g0232 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC07g0232
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSuccinate dehydrogenase subunit 3
LocationMC07: 6895209 .. 6895496 (-)
RNA-Seq ExpressionMC07g0232
SyntenyMC07g0232
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACCTAATATCATGAATATCCTTCGCCCGTTATCTCCTCATCTTCCTATTTATAAGCCACAGCTCACTTCGACGTTTCCAATTTCCCATAGAATCTCCGGGGCTTTCCTAGCCACTCTCGTTTTGTTTTTTTATCTTCTTTGTCTGAAAATGGGTTTGATTTGCTTCACCTATGAGAATTTCTACGGATTCTTCTTTTATTCATCAAAGCTCATCCTAATCTCCGTCGAGATTACTGCCTTAGCCCTGTCCTATCATCTGTATAATGGGGTTCGTCATTTATTGACG

mRNA sequence

GAACCTAATATCATGAATATCCTTCGCCCGTTATCTCCTCATCTTCCTATTTATAAGCCACAGCTCACTTCGACGTTTCCAATTTCCCATAGAATCTCCGGGGCTTTCCTAGCCACTCTCGTTTTGTTTTTTTATCTTCTTTGTCTGAAAATGGGTTTGATTTGCTTCACCTATGAGAATTTCTACGGATTCTTCTTTTATTCATCAAAGCTCATCCTAATCTCCGTCGAGATTACTGCCTTAGCCCTGTCCTATCATCTGTATAATGGGGTTCGTCATTTATTGACG

Coding sequence (CDS)

GAACCTAATATCATGAATATCCTTCGCCCGTTATCTCCTCATCTTCCTATTTATAAGCCACAGCTCACTTCGACGTTTCCAATTTCCCATAGAATCTCCGGGGCTTTCCTAGCCACTCTCGTTTTGTTTTTTTATCTTCTTTGTCTGAAAATGGGTTTGATTTGCTTCACCTATGAGAATTTCTACGGATTCTTCTTTTATTCATCAAAGCTCATCCTAATCTCCGTCGAGATTACTGCCTTAGCCCTGTCCTATCATCTGTATAATGGGGTTCGTCATTTATTGACG

Protein sequence

EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT
Homology
[Close]
BLAST of MC07g0232 vs. ExPASy Swiss-Prot
Match: P35721 (Succinate dehydrogenase cytochrome b560 subunit OS=Marchantia polymorpha OX=3197 GN=SDH3 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-19
Identity = 57/95 (60.00%), Postives = 67/95 (70.53%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          M I RPLSPHL IYKPQLTSTF I HRISGAFLAT+VL F +L  K+G +  T+ +FY +
Sbjct: 1  MKINRPLSPHLTIYKPQLTSTFSIFHRISGAFLATMVL-FSILFFKIGDLSLTFYHFYQY 60

Query: 65 F----FYSSKLILISVEITALALSYHLYNGVRHLL 96
          F    FY +  I+  V  T LAL YH+ NGVRHLL
Sbjct: 61 FFFLTFYLNWFIISLVNFTLLALCYHMSNGVRHLL 94

[Close]
BLAST of MC07g0232 vs. ExPASy Swiss-Prot
Match: P0DKI0 (Succinate dehydrogenase subunit 3-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-1 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 1   EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYEN 60
           EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +
Sbjct: 118 EPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPS 177

Query: 61  FYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT 97
           FY   +++ + + +   +TALA  YH       LLT
Sbjct: 178 FYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLLT 212

[Close]
BLAST of MC07g0232 vs. ExPASy Swiss-Prot
Match: P0DKI1 (Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-2 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-13
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 1   EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYEN 60
           EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +
Sbjct: 118 EPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPS 177

Query: 61  FYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT 97
           FY   +++ + + +   +TALA  YH       LLT
Sbjct: 178 FYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLLT 212

[Close]
BLAST of MC07g0232 vs. ExPASy Swiss-Prot
Match: P80481 (Succinate dehydrogenase cytochrome b560 subunit OS=Reclinomonas americana OX=48483 GN=SDH3 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.5e-09
Identity = 43/101 (42.57%), Postives = 57/101 (56.44%), Query Frame = 0 

Query: 5   MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKM----------GLI 64
           MNI RP+SPHL IYK Q+T+T  I HRI+G  LA L L F++L LKM            I
Sbjct: 17  MNINRPISPHLTIYKLQITNTLSIFHRITGGVLA-LTLCFFILILKMLNFHLSSYAFYSI 76

Query: 65  CFTYENFYGFFFYSSKLILISVEITALALSYHLYNGVRHLL 96
            +T   + GF F +    L+      L + YHL+ G+RHL+
Sbjct: 77  AYTLNQYSGFLFIAISFFLL------LFIFYHLFAGLRHLV 110

[Close]
BLAST of MC07g0232 vs. ExPASy Swiss-Prot
Match: Q68XP1 (Succinate dehydrogenase cytochrome b556 subunit OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=sdhC PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.8e-07
Identity = 37/88 (42.05%), Postives = 50/88 (56.82%), Query Frame = 0 

Query: 9  RPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGFFFYS 68
          RP SPHL IYKPQ++ST  I HR++G     + LFF +  L   LI   Y+N Y      
Sbjct: 12 RPTSPHLTIYKPQISSTLSILHRMTG-----VALFFVVSILVWWLILSKYDNNY---LQL 71

Query: 69 SKLILISVEITAL--ALSYHLYNGVRHL 95
          ++  +I + + A   A  YHL NG+RHL
Sbjct: 72 ARCCIIKICLVAFSYAWCYHLCNGIRHL 91

[Close]
BLAST of MC07g0232 vs. NCBI nr
Match: YP_009913618.1 (succinate dehydrogenase subunit 3 [Luffa acutangula] >QLJ93029.1 succinate dehydrogenase subunit 3 [Luffa acutangula])

HSP 1 Score: 175 bits (443), Expect = 1.51e-54
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYRF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. NCBI nr
Match: YP_009704561.1 (succinate dehydrogenase subunit 3 [Spondias mombin] >YP_009704619.1 succinate dehydrogenase subunit 3 [Spondias tuberosa] >QEP09118.1 succinate dehydrogenase subunit 3 [Spondias mombin] >QEP09150.1 succinate dehydrogenase subunit 3 [Spondias tuberosa])

HSP 1 Score: 172 bits (437), Expect = 1.06e-53
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MN LRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNSLRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. NCBI nr
Match: YP_009519741.1 (succinate dehydrogenase subunit 3 [Nepenthes ventricosa x Nepenthes alata] >AYC21372.1 succinate dehydrogenase subunit 3 [Nepenthes ventricosa x Nepenthes alata])

HSP 1 Score: 172 bits (437), Expect = 1.06e-53
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLAT+VLFFYLLCLK+GLICFTYENFY F
Sbjct: 1  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFYLLCLKIGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. NCBI nr
Match: AHJ80994.1 (succinate dehydrogenase subunit 3 [Panax ginseng] >QXO87061.1 succinate dehydrogenase subunit 3 [Panax ginseng])

HSP 1 Score: 172 bits (436), Expect = 1.51e-53
Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MN+LRPLSPHLP+YKPQLTSTFPISHRISGAFLAT+VLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNLLRPLSPHLPLYKPQLTSTFPISHRISGAFLATIVLFFYLLCLKMGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNG+RHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGIRHLLT 92

[Close]
BLAST of MC07g0232 vs. NCBI nr
Match: QPF97844.1 (succinate dehydrogenase subunit 3 [Solanum bukasovii])

HSP 1 Score: 169 bits (429), Expect = 1.76e-52
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MNILRPLSPHLPIYKPQLTSTF ISHRISGAFLAT+V FFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKMGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. ExPASy TrEMBL
Match: A0A7D6CA10 (Succinate dehydrogenase subunit 3 OS=Luffa acutangula OX=56866 GN=sdh3 PE=3 SV=1)

HSP 1 Score: 175 bits (443), Expect = 7.32e-55
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYRF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. ExPASy TrEMBL
Match: A0A5C2FYC4 (Succinate dehydrogenase subunit 3 OS=Spondias mombin OX=80338 GN=sdh3 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 5.14e-54
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MN LRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNSLRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. ExPASy TrEMBL
Match: A0A5C2FU18 (Succinate dehydrogenase subunit 3 OS=Spondias tuberosa OX=991123 GN=sdh3 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 5.14e-54
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MN LRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNSLRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. ExPASy TrEMBL
Match: A0A385Y467 (Succinate dehydrogenase subunit 3 OS=Nepenthes ventricosa x Nepenthes alata OX=1744888 GN=sdh3 PE=3 SV=1)

HSP 1 Score: 172 bits (437), Expect = 5.14e-54
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLAT+VLFFYLLCLK+GLICFTYENFY F
Sbjct: 1  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFYLLCLKIGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNGVRHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLT 92

[Close]
BLAST of MC07g0232 vs. ExPASy TrEMBL
Match: A0A096XF76 (Succinate dehydrogenase subunit 3 OS=Panax ginseng OX=4054 GN=sdh3 PE=3 SV=1)

HSP 1 Score: 172 bits (436), Expect = 7.31e-54
Identity = 87/92 (94.57%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 5  MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYENFYGF 64
          MN+LRPLSPHLP+YKPQLTSTFPISHRISGAFLAT+VLFFYLLCLKMGLICFTYENFY F
Sbjct: 1  MNLLRPLSPHLPLYKPQLTSTFPISHRISGAFLATIVLFFYLLCLKMGLICFTYENFYQF 60

Query: 65 FFYSSKLILISVEITALALSYHLYNGVRHLLT 96
          FFYSSKLILISVEITALALSYHLYNG+RHLLT
Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGIRHLLT 92

[Close]
BLAST of MC07g0232 vs. TAIR 10
Match: AT4G32210.1 (succinate dehydrogenase 3-2 )

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 1   EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYEN 60
           EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +
Sbjct: 118 EPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPS 177

Query: 61  FYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT 97
           FY   +++ + + +   +TALA  YH       LLT
Sbjct: 178 FYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLLT 212

[Close]
BLAST of MC07g0232 vs. TAIR 10
Match: AT5G09600.1 (succinate dehydrogenase 3-1 )

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 1   EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYEN 60
           EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +
Sbjct: 118 EPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPS 177

Query: 61  FYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT 97
           FY   +++ + + +   +TALA  YH       LLT
Sbjct: 178 FYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLLT 212

[Close]
BLAST of MC07g0232 vs. TAIR 10
Match: AT5G09600.2 (succinate dehydrogenase 3-1 )

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 1   EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYEN 60
           EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +
Sbjct: 91  EPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPS 150

Query: 61  FYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT 97
           FY   +++ + + +   +TALA  YH       LLT
Sbjct: 151 FYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLLT 185

[Close]
BLAST of MC07g0232 vs. TAIR 10
Match: AT5G09600.3 (succinate dehydrogenase 3-1 )

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0 

Query: 1   EPNIMNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATLVLFFYLLCLKMGLICFTYEN 60
           EP I +  RPLSPHL +Y+PQ+ S   I +RISG +L  +    YLL LKMG+IC TY +
Sbjct: 118 EPKIKS-FRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPS 177

Query: 61  FYGFFFYSSKLILISVEITALALSYHLYNGVRHLLT 97
           FY   +++ + + +   +TALA  YH       LLT
Sbjct: 178 FYQVLYHTQQQLPVITSVTALAAIYHTIKSTHSLLT 212

The following BLAST results are available for this feature:
BLAST of MC07g0232 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P357213.5e-1960.00Succinate dehydrogenase cytochrome b560 subunit OS=Marchantia polymorpha OX=3197... [more]
P0DKI01.7e-1343.75Succinate dehydrogenase subunit 3-1, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P0DKI11.7e-1343.75Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
P804815.5e-0942.57Succinate dehydrogenase cytochrome b560 subunit OS=Reclinomonas americana OX=484... [more]
Q68XP16.8e-0742.05Succinate dehydrogenase cytochrome b556 subunit OS=Rickettsia typhi (strain ATCC... [more]
BLAST of MC07g0232 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009913618.11.51e-5498.91succinate dehydrogenase subunit 3 [Luffa acutangula] >QLJ93029.1 succinate dehyd... [more]
YP_009704561.11.06e-5397.83succinate dehydrogenase subunit 3 [Spondias mombin] >YP_009704619.1 succinate de... [more]
YP_009519741.11.06e-5396.74succinate dehydrogenase subunit 3 [Nepenthes ventricosa x Nepenthes alata] >AYC2... [more]
AHJ80994.11.51e-5394.57succinate dehydrogenase subunit 3 [Panax ginseng] >QXO87061.1 succinate dehydrog... [more]
QPF97844.11.76e-5295.65succinate dehydrogenase subunit 3 [Solanum bukasovii][more]
BLAST of MC07g0232 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7D6CA107.32e-5598.91Succinate dehydrogenase subunit 3 OS=Luffa acutangula OX=56866 GN=sdh3 PE=3 SV=1[more]
A0A5C2FYC45.14e-5497.83Succinate dehydrogenase subunit 3 OS=Spondias mombin OX=80338 GN=sdh3 PE=3 SV=1[more]
A0A5C2FU185.14e-5497.83Succinate dehydrogenase subunit 3 OS=Spondias tuberosa OX=991123 GN=sdh3 PE=3 SV... [more]
A0A385Y4675.14e-5496.74Succinate dehydrogenase subunit 3 OS=Nepenthes ventricosa x Nepenthes alata OX=1... [more]
A0A096XF767.31e-5494.57Succinate dehydrogenase subunit 3 OS=Panax ginseng OX=4054 GN=sdh3 PE=3 SV=1[more]
BLAST of MC07g0232 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G32210.11.2e-1443.75succinate dehydrogenase 3-2 [more]
AT5G09600.11.2e-1443.75succinate dehydrogenase 3-1 [more]
AT5G09600.21.2e-1443.75succinate dehydrogenase 3-1 [more]
AT5G09600.31.2e-1443.75succinate dehydrogenase 3-1 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014314Succinate dehydrogenase, cytochrome b556 subunitPIRSFPIRSF000178SDH_cyt_b560coord: 2..96
e-value: 6.1E-22
score: 76.1
IPR014314Succinate dehydrogenase, cytochrome b556 subunitTIGRFAMTIGR02970TIGR02970coord: 9..95
e-value: 3.0E-15
score: 54.5
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitGENE3D1.20.1300.10Fumarate reductase/succinate dehydrogenase, transmembrane subunitcoord: 3..96
e-value: 6.4E-22
score: 80.0
IPR034804Fumarate reductase/succinate dehydrogenase, transmembrane subunitSUPERFAMILY81343Fumarate reductase respiratory complex transmembrane subunitscoord: 3..95
IPR000701Succinate dehydrogenase/fumarate reductase type B, transmembrane subunitPFAMPF01127Sdh_cytcoord: 7..95
e-value: 4.7E-15
score: 55.7
NoneNo IPR availablePIRSRPIRSR000178-1PIRSR000178-1coord: 9..95
e-value: 1.6E-19
score: 68.1
NoneNo IPR availablePANTHERPTHR10978SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNITcoord: 6..95
NoneNo IPR availablePANTHERPTHR10978:SF5SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIALcoord: 6..95
NoneNo IPR availableCDDcd03499SQR_TypeC_SdhCcoord: 9..95
e-value: 5.98324E-18
score: 70.6415

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC07g0232.1MC07g0232.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006121 mitochondrial electron transport, succinate to ubiquinone
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component GO:0016020 membrane
cellular_component GO:0045281 succinate dehydrogenase complex
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000104 succinate dehydrogenase activity
molecular_function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors