MC07g0223 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0223
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 6824053 .. 6824485 (+)
RNA-Seq Expression	MC07g0223
Synteny	MC07g0223

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCA

mRNA sequence

ATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGACTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCA

Coding sequence (CDS)

ATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGACTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCA

Protein sequence

MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPIHRLRALYAQSFRRTLAPPVLPRLLARTLQAALPFFTHAILLDRAFAHCPRFPTAAPRGSPGRVSVP

Homology

[Close]

BLAST of MC07g0223 vs. NCBI nr
Match: KAB1215691.1 (hypothetical protein CJ030_MR4G009217 [Morella rubra])

HSP 1 Score: 222 bits (566), Expect = 2.76e-71
Identity = 117/144 (81.25%), Postives = 117/144 (81.25%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSH SVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSE VSRAFHQFLATFTFNPI
Sbjct: 1   MLSHSSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFHQFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           HRLRALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HRLRALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. NCBI nr
Match: VAH73319.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 220 bits (561), Expect = 4.45e-71
Identity = 116/144 (80.56%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSE VSRAF  FLATFTFNPI
Sbjct: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           HRLRALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HRLRALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDCTLDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. NCBI nr
Match: VAI85564.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 218 bits (555), Expect = 3.77e-70
Identity = 115/145 (79.31%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPSVGRDPESCL FWRSFVDLRISPLHTKFHSPLSHSSE VSRAF  FLATFTFNPI
Sbjct: 1   MLSHPSVGRDPESCLHFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLPR-------------------LLARTLQAALPFFTHAILL 120
           HRLRALYAQSFRRTLAPP   R                   L  R LQAA PFFTHAILL
Sbjct: 61  HRLRALYAQSFRRTLAPPPSYRGCWHGVRRGFFLESCHDRALDERALQAAFPFFTHAILL 120

Query: 121 DRAFAHCPRFPTAAPRGSPGRVSVP 126
           DRAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 DRAFAHCPRFPTAAPRGSPGRVSVP 145

[Close]

BLAST of MC07g0223 vs. NCBI nr
Match: VAH60210.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 217 bits (553), Expect = 7.36e-70
Identity = 113/144 (78.47%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPSVGRDPESCLRFW SF+DLRISPLHTKFHSPLSHSSE VSRAFH FLATFTFNPI
Sbjct: 1   MLSHPSVGRDPESCLRFWHSFIDLRISPLHTKFHSPLSHSSELVSRAFHHFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           H L ALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HHLHALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. NCBI nr
Match: VAH46072.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 217 bits (552), Expect = 1.04e-69
Identity = 114/144 (79.17%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPS+GRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSE VSRAF  FLATFTFN I
Sbjct: 1   MLSHPSIGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNSI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           HRLRALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HRLRALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. ExPASy TrEMBL
Match: A0A6A1VS04 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G009217 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.34e-71
Identity = 117/144 (81.25%), Postives = 117/144 (81.25%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSH SVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSE VSRAFHQFLATFTFNPI
Sbjct: 1   MLSHSSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFHQFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           HRLRALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HRLRALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. ExPASy TrEMBL
Match: A0A446PFS3 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Bv1G038210 PE=4 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.15e-71
Identity = 116/144 (80.56%), Postives = 116/144 (80.56%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSE VSRAF  FLATFTFNPI
Sbjct: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           HRLRALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HRLRALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDCTLDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. ExPASy TrEMBL
Match: A0A446YAS6 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G057700 PE=4 SV=1)

HSP 1 Score: 218 bits (555), Expect = 1.83e-70
Identity = 115/145 (79.31%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPSVGRDPESCL FWRSFVDLRISPLHTKFHSPLSHSSE VSRAF  FLATFTFNPI
Sbjct: 1   MLSHPSVGRDPESCLHFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLPR-------------------LLARTLQAALPFFTHAILL 120
           HRLRALYAQSFRRTLAPP   R                   L  R LQAA PFFTHAILL
Sbjct: 61  HRLRALYAQSFRRTLAPPPSYRGCWHGVRRGFFLESCHDRALDERALQAAFPFFTHAILL 120

Query: 121 DRAFAHCPRFPTAAPRGSPGRVSVP 126
           DRAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 DRAFAHCPRFPTAAPRGSPGRVSVP 145

[Close]

BLAST of MC07g0223 vs. ExPASy TrEMBL
Match: A0A446NDP2 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Av1G093540 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 3.56e-70
Identity = 113/144 (78.47%), Postives = 114/144 (79.17%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPSVGRDPESCLRFW SF+DLRISPLHTKFHSPLSHSSE VSRAFH FLATFTFNPI
Sbjct: 1   MLSHPSVGRDPESCLRFWHSFIDLRISPLHTKFHSPLSHSSELVSRAFHHFLATFTFNPI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           H L ALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HHLHALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

[Close]

BLAST of MC07g0223 vs. ExPASy TrEMBL
Match: A0A446M8F4 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_2Bv1G119820 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 5.06e-70
Identity = 114/144 (79.17%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 1   MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSEWVSRAFHQFLATFTFNPI 60
           MLSHPS+GRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSE VSRAF  FLATFTFN I
Sbjct: 1   MLSHPSIGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNSI 60

Query: 61  HRLRALYAQSFRRTLAPPVLP------------------RLLARTLQAALPFFTHAILLD 120
           HRLRALYAQSFRRTLAPP                      L  R LQAALPFFTHAILLD
Sbjct: 61  HRLRALYAQSFRRTLAPPSYRGCWHGVSRGFFLESCHDRALDERALQAALPFFTHAILLD 120

Query: 121 RAFAHCPRFPTAAPRGSPGRVSVP 126
           RAFAHCPRFPTAAPRGSPGRVSVP
Sbjct: 121 RAFAHCPRFPTAAPRGSPGRVSVP 144

The following BLAST results are available for this feature:

BLAST of MC07g0223 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0223 vs. NCBI nr


Match Name	E-value	Identity	Description
KAB1215691.1	2.76e-71	81.25	hypothetical protein CJ030_MR4G009217 [Morella rubra]	[more]
VAH73319.1	4.45e-71	80.56	unnamed protein product [Triticum turgidum subsp. durum]	[more]
VAI85564.1	3.77e-70	79.31	unnamed protein product [Triticum turgidum subsp. durum]	[more]
VAH60210.1	7.36e-70	78.47	unnamed protein product [Triticum turgidum subsp. durum]	[more]
VAH46072.1	1.04e-69	79.17	unnamed protein product [Triticum turgidum subsp. durum]	[more]

BLAST of MC07g0223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1VS04	1.34e-71	81.25	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR4G009217 PE=4 SV=1	[more]
A0A446PFS3	2.15e-71	80.56	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Bv1G...	[more]
A0A446YAS6	1.83e-70	79.31	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_7Bv1G...	[more]
A0A446NDP2	3.56e-70	78.47	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_3Av1G...	[more]
A0A446M8F4	5.06e-70	79.17	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_2Bv1G...	[more]

BLAST of MC07g0223 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0223.1	MC07g0223.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane